Os03g0238700

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Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0238700| Description = Similar to Acid phosphatase type 5| Version = NM_001056036.1 GI:115451800 GeneID:4332196| Length = 4833 bp| Definit...")
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Gene Name

Os03g0238700

Description

Similar to Acid phosphatase type 5

Version

NM_001056036.1 GI:115451800 GeneID:4332196

Length

4833 bp

Definition

Oryza sativa Japonica Group Os03g0238700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7373349..7378181

Sequence Coding Region

7375644..7376081,7376473..7376523,7376627..7376722,7377126..7377198,7377764..7377966
,7378061..7378156

Expression

GEO Profiles:Os03g0238700

Genome Context

<gbrowseImage1> name=NC_008396:7373349..7378181 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7373349..7378181 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgcggccgccgcttcgcctccgcctcccgccgccgccggcgaacacctccgcttccacctccgcggcttcctctccccggagacctgcaaggagctggagttcgtgcaccggagctgcggcacggccgggtaccgcccttcggtggtgtcgacgtcgcttccgcacctggctgccaccggctgcggccacctcctcctcccgttcgtccccgtccgcgagcggctccgcgacgccgtcgagtcggccttctcctgccacttcgacctcttcatcgagttcaccgggctcatcagttggtgcaagggagcttctattgggtggcacagtgatgacaacaaaccttatcttaggcaaagagccttcacggcagtgtgctacttaaacgatcatgggaaggactataaaggtggaattttgcagtttcaggatggtgaaccttcctttattactccagttgctggtgatgttgtcatctacactgcagataatagtaatacccattgtgtagatgaggtgactgaaggtgaaagactcaccctaactctttggttcaccagagacagtgcttatgacgaggacccaaagctcctttcctttctttctcagacatcactgaactatgaaccagttcatcagagttcttatattcctttgccagcctctgatataatgtattggtttgcctatgaccattctggttttgacgtacgatgtgctagagtgcacattcttgggttctctttccactcaagcattgatgaagacaataaatctgttgcacctgctgaagatgaccctatagagttgcttgggaagccagtacgacttggtaggggagatgatgtctttgacaaagtttttgccaatggcttgcatgctcttcaggtatctacatactttcactttttaagtagttttagtctgcagatcatgtccattagattacaatag</cdnaseq>

Protein Sequence

<aaseq>MSAAAASPPPPAAAGEHLRFHLRGFLSPETCKELEFVHRSCGTA GYRPSVVSTSLPHLAATGCGHLLLPFVPVRERLRDAVESAFSCHFDLFIEFTGLISWC KGASIGWHSDDNKPYLRQRAFTAVCYLNDHGKDYKGGILQFQDGEPSFITPVAGDVVI YTADNSNTHCVDEVTEGERLTLTLWFTRDSAYDEDPKLLSFLSQTSLNYEPVHQSSYI PLPASDIMYWFAYDHSGFDVRCARVHILGFSFHSSIDEDNKSVAPAEDDPIELLGKPV RLGRGDDVFDKVFANGLHALQVSTYFHFLSSFSLQIMSIRLQ</aaseq>

Gene Sequence

<dnaseqindica>2101..2538#1659..1709#1460..1555#984..1056#216..418#26..121#actccacacttccacaactccgaccatgtccgcggccgccgcttcgcctccgcctcccgccgccgccggcgaacacctccgcttccacctccgcggcttcctctccccggagacctgcaaggtatataccttcttccccttttggcctctccgcctgaatcatctcaaaggctctccgaaccatggctttggtgcgacgggaatcgcgtgcgcaggagctggagttcgtgcaccggagctgcggcacggccgggtaccgcccttcggtggtgtcgacgtcgcttccgcacctggctgccaccggctgcggccacctcctcctcccgttcgtccccgtccgcgagcggctccgcgacgccgtcgagtcggccttctcctgccacttcgacctcttcatcgagttcaccgggctcatcaggtgctgagcaatcacgtgatgtgcatgtgcattcattgccgactcgattctagtacgttcgcagcttgacgtccacatcgaaatggttgctgttcgtagttgaggaatttagtgtgcagtgtaagttcggaattgcttgccgttacgatgccatgcatattcagtgaatgggtggtagagtgagtttccaggttgctgaagcaccgtaggtcaagtggaaatatcactgggtttgtgggatttcctgtcctgttaagtatccagcgagacacatttgagttctattgtggaatcgtggtaattttcatgggaaaacttttcctaaccattgttatgacagcttttcctaactattagtacatgggaaaacattgagatctaaaaacagcccctcttattgttctagcaactgcataagaatgaacagtatgttttaccatataaaaacgtcatcaccttactcacttgcttcccgaaagctagttcaagagttcttctctgaaaatactcgacagttgacactaaaatgctattcgtattggaatcctgtctgttgggtctgcagttggtgcaagggagcttctattgggtggcacagtgatgacaacaaaccttatcttaggcaaagagccttcacggtgagggtcaatctatctttgggtatttagtcaacttttatagttgttttcatgtctacatattgttttgtctgttccaacaaactgtatttcatgcaagcattcatttcggtgcttctgatattgtgaattgcattttttttgtatgattatctagttaatcttattttgtatgagtaatttatctctgtttgtgggactatctaggtcctgtccaaaatatactcttccattttctcagttgttgtagttgtttatatttcaatgcggccctttttactcaaatgtactgttctcagttcttttttttgactaacactcttctcagttcttgttctgaccctttttccttctgaattaaaatatggcatggaatgcaccatttccatctttcaatcaaaaggcagtgtgctacttaaacgatcatgggaaggactataaaggtggaattttgcagtttcaggatggtgaaccttcctttattactccagttgctggtgtaagctaatgcattttgatttacagtttgcatgcatgcattttttttaataattaaatgaatatatattcttggaatttctgagaagtactgttgttttcaggatgttgtcatctacactgcagataatagtaatacccattgtgtagatgaggtacatttctgtttcctgcatgggccagttgattgtttctgtactgggttcatgcctattcttttcattggcattgtttgtcacattttctgttttcacttggataatcagcaagatgttagtatatctgttactattattgttgttttgatgaatcaaataaaattatttgtttgagtgtgctctaagttgcaacaggtaattgaggctacattttgttatcaatgatttagtcctaatttatgtctatccttttcccttgcaccttgttttttgtaaacaatcaattcatatgtggccaaagtattatcttgtcaagggattttatttttcttctgaggttgatgcgtgccctttcttgtttattaataaagtgcagctatttttgcaggtgactgaaggtgaaagactcaccctaactctttggttcaccagagacagtgcttatgacgaggacccaaagctcctttcctttctttctcagacatcactgaactatgaaccagttcatcagagttcttatattcctttgccagcctctgatataatgtattggtttgcctatgaccattctggttttgacgtacgatgtgctagagtgcacattcttgggttctctttccactcaagcattgatgaagacaataaatctgttgcacctgctgaagatgaccctatagagttgcttgggaagccagtacgacttggtaggggagatgatgtctttgacaaagtttttgccaatggcttgcatgctcttcaggtatctacatactttcactttttaagtagttttagtctgcagatcatgtccattagattacaatagtcaaactttattatcctttactgcacgtgtaagatgcctttatttcaatgttatagtctaaatcttcatgagaatgctataacaacagaaaattctgtggttgtattagagaatgacattcctcaaataagttgacatcttttagaaaatacaaataaaaaattatttatgccccattagaatatgctttttttttctaattcctttacaaaaggaactgtttcctatgatattcctgctttccaaacatggcattcaaatgtgttatatcctgttctgttaagcgtgtcagtgttctatgatttgcaaatctctgaaacaggtggtgcagttttactactggaaagcacctgagctgtcagcaaagaggaaacaaacttctggtggttcaggaacagtctgctgtcctgttagtcaatccagaggaacaaaactaccattgccatgcaaccatggccttgaacaaaccatatttggatcacataagaatgtagagattgattttgaatggagtgattttgaattagccgtatctatgtgggagaattattcagaagaattgcagagaaagctgttgacatttttgccatattggctgtccagtgaggccatttttattgtcagttcctgttctccccaggtatgcactgaagggaactaaatgttgacctgataatttcaatacattaatagtaataacgtcgcgatgatgttacctagaattagtttcaaattatagtgttttttttctttgaaaagaacgatgtgtcaagaatgttggatttatctagctttgcattttggagagcttttatatggcatgttaaagcctcattttacctttcataacttgcttgccagaattttcattataattttattctgttatatgcaatttttattcaaatggacacgtacacaactctgtactgaattacaacctttttccagaagcagtaactaatagccgtcttcaccgacacatgcttgattatcatagatcaaattttcttttcattgtctcttttaaatgaaaataccagcttagaaacccccaaagtctctctctctctctctctctctccaaaggttatatgtgaatgcttggcaatactgaagaaccctgatgccgatatgcaaaggtcactactagcttttagagttttaagccttctttgtaaattatacatggcataatcgatggtcctctggcaagaagttgtatgaatcagatctaatggataccatactgaacatctcttttcctagtctagtaggatggtctcggccttgtctcaaatttctttagtagatcaatcacatgccatgcttaaatactttcctatttcctttccggtcctcttcccttgcgtgccacaataatgcattcaaatttgatacaaatatcttagccaagctaattctccgttttgtggttttgcatctgcctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccacttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatctggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgcaagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtaacaataggagtgcatgcattcaggttagacaagtttcatcgattatgcaaacatgttttgttctatattactgtgacataaaagcggaaactttgtgtcaaatgatgttaacctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaagtcgatgccattgacctgaaattccatgaaacagtgataaggaagtactctttttgtggatccttcagaacttaatatcgaggcaacttctgtataaccttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactgacgctcctaatggtatgatgcccaacagcaatcttccacttcgctgttgatttcttcattgcctcatccatatcctagatagtagaccccataaaataaaatattaaaacaattttgctcagcaacctaggaatagcttttttttgttcttaagcattgatgactgttccattccaaatgcgcaccttaagtagattagttatgtatttttgtcgaggtgccactcctctccagtcataatgatggtctttagggcgagtccaatatttcagctgaaatggagttgtgtcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0238700, RefSeq:Os03g0238700