Os03g0238600

From RiceWiki
Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0238600| Description = Similar to Purple acid phosphatase| Version = NM_001056035.1 GI:115451798 GeneID:4332195| Length = 2654 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0238600

Description

Similar to Purple acid phosphatase

Version

NM_001056035.1 GI:115451798 GeneID:4332195

Length

2654 bp

Definition

Oryza sativa Japonica Group Os03g0238600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7371854..7374507

Sequence Coding Region

7371919..7372116,7372831..7372987,7373103..7373210,7373327..7373454,7373566..7373694
,7373778..7373845,7373963..7374194

Expression

GEO Profiles:Os03g0238600

Genome Context

<gbrowseImage1> name=NC_008396:7371854..7374507 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7371854..7374507 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggaggagcagcagcagagcgtgcgcggccatggcgacggccgccgtctttgcgctgctggccgcgacggcgacggcgtcggggctcgtacgggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactggggccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaagctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactggcgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgcagaagccatggtacctggtgctgggaaatcatgactacaggggtgatgtgctagcacagcttagcccagtcttgcgaaagatcgaccagcgattcatttgcatgaggtcgttcattgttaatgcagagattgtggatttcttctttatcgacacaactccatttcagctgaaatattggactcgccctaaagaccatcattatgactggagaggagtggcacctcgacaaaaatacataactaatctacttaaggatatggatgaggcaatgaagaaatcaacagcgaagtggaagattgctgttgggcatcataccattaggagcgtcagtgaccatggtgacaccaaggagcttctgcaacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgaccactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttatgatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccctccacctatatcactgaagcatga</cdnaseq>

Protein Sequence

<aaseq>MARRSSSRACAAMATAAVFALLAATATASGLVRVEHPAKSDGSL SLLVVGDWGRKGTYNQSRVAEQMGKVGEKLNIDFVISTGDNFYEDGLTGVDDQAFEES FTDIYTAKSLQKPWYLVLGNHDYRGDVLAQLSPVLRKIDQRFICMRSFIVNAEIVDFF FIDTTPFQLKYWTRPKDHHYDWRGVAPRQKYITNLLKDMDEAMKKSTAKWKIAVGHHT IRSVSDHGDTKELLQLLLPVLKVNGIDFYINGHDHCLEHISSRDSPIQYFTSGGGSKA WRGVLQPNSDKLQFFYDGQGFMSLQINQDQADFIFYDVSGNILYKWSKSKANYLQPST YITEA</aaseq>

Gene Sequence

<dnaseqindica>66..263#978..1134#1250..1357#1474..1601#1713..1841#1925..1992#2110..2341#ggagcctctcgttaccgagagagagagagagagagagagagagggcagtgcaggtgtcgctggccatggcgaggaggagcagcagcagagcgtgcgcggccatggcgacggccgccgtctttgcgctgctggccgcgacggcgacggcgtcggggctcgtacgggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactggggccggaagggcacgtacaaccaatccagggtcgccgagcaggtaaaaccaaacgccccctcctcctccgtcggccgcgatccgtttcctcgcttcccgggatttaactctagttgttaaattttgctctaattgctgcggtaaatccatggtttgagctggccgttttaaggtcctaaccgcgcattacgggctcggataattggattggatggaaaagagagagagagagtgaggagacggcgagatgggggggagggagtccagatgggattcggtttggcagttgatggcgtgtgcgtacagtgctgggttggttggttggttgcttgcttgcttcgccagttggcatttcgtcgcgtatggtttaaactgacgaagtcgccggtgacgacgccgcgatggcgtgggcttcttttggtcttctgcccgccggtatgggcgcgcggccgaatgaaggaatgggaggggagaatatcagagtagaactgccaatacgcagatgcccatattaccgaactggccgatgtgatcagaaactattctcttgttgtgtgctcgagcaattaacagtttacctccagtgaaatggctaccttcatttctgggattagcagcggacagttttcagaagacatctcttgaccattattttctatttgtattattaaagtgaatactttttttaaaactgaaggtattattttttaaatagcaaagacaaacaatattaagtatggacaatttatcatgcagatggggaaggttggggagaagctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactggcgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgcagaagccatggtacctgggtaagctttctgcttcttgtcacttatgtcaccaataacatttaccaagtacccctgttacgaaatatgctaatatgttatttgaacgtgtactaaaacatgaacatttcttcagtgctgggaaatcatgactacaggggtgatgtgctagcacagcttagcccagtcttgcgaaagatcgaccagcgattcatttgcatgaggtcgttcattgttaatgcaggtaggaaaaaaaatgcagtatttggttactacttggatatgatgatagagttctgaactgtaacgtgcaaaacaacgctaactttgtatgatctgtcatcaacctttttttttcagagattgtggatttcttctttatcgacacaactccatttcagctgaaatattggactcgccctaaagaccatcattatgactggagaggagtggcacctcgacaaaaatacataactaatctacttaaggtgcgcatttggaatggaacagtcatcaatgcttaagaacaaaaaaaagctattcctaggttgctgagcaaaattgttttaatattttattttatggggtctactatctaggatatggatgaggcaatgaagaaatcaacagcgaagtggaagattgctgttgggcatcataccattaggagcgtcagtgaccatggtgacaccaaggagcttctgcaacttctacttccagttctgaaggttatacagaagttgcctcgatattaagttctgaaggatccacaaaaagagtacttccttatcactgtttcatggaatttcaggtcaatggcatcgacttctacatcaatgggcacgaccactgcctggaacacattagcagcagagacaggttaacatcatttgacacaaagtttccgcttttatgtcacagtaatatagaacaaaacatgtttgcataatcgatgaaacttgtctaacctgaatgcatgcactcctattgttacagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttatgatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccctccacctatatcactgaagcatgaggcagatgcaaaaccacaaaacggagaattagcttggctaagatatttgtatcaaatttgaatgcattattgtggcacgcaagggaagaggaccggaaaggaaataggaaagtatttaagcatggcatgtgattgatctactaaagaaatttgagacaaggccgagaccatcctactagactaggaaaagagatgttcagtatggtatccattagatctgattcatacaacttcttgccagaggaccatcgattatgccatgtataatttacaaagaaggcttaaaactctaaaagctagtagtgacctttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0238600, RefSeq:Os03g0238600