Os03g0243700

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0243700| Description = Glycoside hydrolase, family 10 protein| Version = NM_001056064.1 GI:115451856 GeneID:4332224| Length = 1590 bp| Def...")
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Gene Name

Os03g0243700

Description

Glycoside hydrolase, family 10 protein

Version

NM_001056064.1 GI:115451856 GeneID:4332224

Length

1590 bp

Definition

Oryza sativa Japonica Group Os03g0243700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7650773..7652362

Sequence Coding Region

7650783..7650866,7650946..7651092,7651167..7652141

Expression

GEO Profiles:Os03g0243700

Genome Context

<gbrowseImage1> name=NC_008396:7650773..7652362 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7650773..7652362 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagatcacggtcgcgagcggttcgcttcagccgttcacgtcggatcagtggtccatgcaccagaaagacacgatccggaagaggaggaagcggatggctaccatccacgttgccgatcagcaaggcggccgcgtggttggcgcgtccgtgtccgtgagacaaaccgccaaggacttcccgttcggctcggccatcgcctccaccatcttggggaaccaagcctatcagaaatggttcgtggatcggttcaacgcggcggtgttcgaggacgagctgaagtggtactctacggagcccatgtcggggcagctgcggttcgacgtgccggaccagatgctggcgttcgtgcggtcgcaccgcgtgatggtgcgagggcacaacatcttctgggagaaccaggacgcgacgccgagctgggtgaagggcctgtcaccggacgacctccgcgccgccgtcaacggccggatccagaacctgatgacccgctaccgcggcgagttcgcgcactgggacgtgaacaacgagatgctgcactacaacttctacgagcagcggctgggcgccaacgcgtcggtggagttcttcagcgtggcgcaggacgccgacccgctcgccacgctcttcatgaacgagttcaacgtgatcgagacctgcgacgacgtgtcctccaccgtggacacgtacgtggcgaagctcaaggacctccgcgcggggggcgccgtcctggagggcatcggcctggagggacacttcctcaagcccaacatcccgctcatgcgcgccgtgctcgacaagctcgccacgctcggcctgcccatctggttcaccgagatcgacatcagcaaccggtacgacgcgcagacgcaggccgtctacctggagcaggtgctcagggaggcgtactcccacccggccgtcaccggcgtcatgctgtggacggcgctgcaccccaacggatgctaccagatgtgcctcaccgactggaacctcaacaacctccccgtcggagacgtcgtcgaccgcctcctgcaggagtggcagacggggcaggccgccggcccgaccgacgcgcacggcgcctacagcttcagcggattcctcggggagtacatcgtctccgtcacctacgccaacagcacgtcgcaggccaccttctcgctctctcccggcgacgagaccaggcacatcaacatccagatatga</cdnaseq>

Protein Sequence

<aaseq>MKITVASGSLQPFTSDQWSMHQKDTIRKRRKRMATIHVADQQGG RVVGASVSVRQTAKDFPFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMS GQLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNL MTRYRGEFAHWDVNNEMLHYNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIET CDDVSSTVDTYVAKLKDLRAGGAVLEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWF TEIDISNRYDAQTQAVYLEQVLREAYSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNL PVGDVVDRLLQEWQTGQAAGPTDAHGAYSFSGFLGEYIVSVTYANSTSQATFSLSPGD ETRHINIQI</aaseq>

Gene Sequence

<dnaseqindica>11..94#174..320#395..1369#caagacccctatgaagatcacggtcgcgagcggttcgcttcagccgttcacgtcggatcagtggtccatgcaccagaaagacacgatccggaaggtaacgttttcgtttagacgtgaaaatatataatgcgagattgcgactctgataacctgatctgttttggttcaagcagaggaggaagcggatggctaccatccacgttgccgatcagcaaggcggccgcgtggttggcgcgtccgtgtccgtgagacaaaccgccaaggacttcccgttcggctcggccatcgcctccaccatcttggggaaccaagcctatcaggtacgtgcagcgtcgcgtcagtgcaaagaaagtgtagaaaaacgtggctaaaatggtgtatggactggtggcagaaatggttcgtggatcggttcaacgcggcggtgttcgaggacgagctgaagtggtactctacggagcccatgtcggggcagctgcggttcgacgtgccggaccagatgctggcgttcgtgcggtcgcaccgcgtgatggtgcgagggcacaacatcttctgggagaaccaggacgcgacgccgagctgggtgaagggcctgtcaccggacgacctccgcgccgccgtcaacggccggatccagaacctgatgacccgctaccgcggcgagttcgcgcactgggacgtgaacaacgagatgctgcactacaacttctacgagcagcggctgggcgccaacgcgtcggtggagttcttcagcgtggcgcaggacgccgacccgctcgccacgctcttcatgaacgagttcaacgtgatcgagacctgcgacgacgtgtcctccaccgtggacacgtacgtggcgaagctcaaggacctccgcgcggggggcgccgtcctggagggcatcggcctggagggacacttcctcaagcccaacatcccgctcatgcgcgccgtgctcgacaagctcgccacgctcggcctgcccatctggttcaccgagatcgacatcagcaaccggtacgacgcgcagacgcaggccgtctacctggagcaggtgctcagggaggcgtactcccacccggccgtcaccggcgtcatgctgtggacggcgctgcaccccaacggatgctaccagatgtgcctcaccgactggaacctcaacaacctccccgtcggagacgtcgtcgaccgcctcctgcaggagtggcagacggggcaggccgccggcccgaccgacgcgcacggcgcctacagcttcagcggattcctcggggagtacatcgtctccgtcacctacgccaacagcacgtcgcaggccaccttctcgctctctcccggcgacgagaccaggcacatcaacatccagatatgaccatacgtatgtacacggtacacctcctcggtgtatatggcttcaagctctgctgacatcgtgacatactgacatgtcgtcacgtatgtgtaatgggtgacagtgtactgtcacgacttgtaggttgtaattgtggttacggaggtcagttaaccataaattggttcgattgaaccatgtacatgtacctggctcgggccggagactcgaacgaaccacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0243700, RefSeq:Os03g0243700