Os03g0243800

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0243800| Description = Proteinase inhibitor, PMP and SGCI repeat containing protein| Version = NM_001056065.2 GI:297600638 GeneID:4332225| ...")
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Gene Name

Os03g0243800

Description

Proteinase inhibitor, PMP and SGCI repeat containing protein

Version

NM_001056065.2 GI:297600638 GeneID:4332225

Length

4413 bp

Definition

Oryza sativa Japonica Group Os03g0243800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7652425..7656837

Sequence Coding Region

7652461..7652602,7653515..7653741

Expression

GEO Profiles:Os03g0243800

Genome Context

<gbrowseImage1> name=NC_008396:7652425..7656837 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7652425..7656837 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactccgcctcgccgccctccccgccgccggcgcaggcgtccgccgcagaagccagtggggcatccaatgccagcctgcggtggcgcatccttcgccgcgccctgctcgcgcgctccgcctccacctcccgcgcaccagaggaaacttctaacgatcagcaagataaaaatgatactaacaaaatttccagaaagacatcgcgtggctttgacctgattgagtgtcatatgctgcccatttcacagtcaactaaatcacatggggattcatcaagtagaaatgagaatattgtggaatgccataatgatgttcgtgtctgttacaagctaccttgtgaaggttcacctaaacttaacctagtgtaa</cdnaseq>

Protein Sequence

<aaseq>MDSASPPSPPPAQASAAEASGASNASLRWRILRRALLARSASTS RAPEETSNDQQDKNDTNKISRKTSRGFDLIECHMLPISQSTKSHGDSSSRNENIVECH NDVRVCYKLPCEGSPKLNLV</aaseq>

Gene Sequence

<dnaseqindica>37..178#1091..1317#ggaatcacccgagagatcacacatctcgggctcccgatggactccgcctcgccgccctccccgccgccggcgcaggcgtccgccgcagaagccagtggggcatccaatgccagcctgcggtggcgcatccttcgccgcgccctgctcgcgcgctccgcctccacctcccgcgcaccaggtccccgccgattccttccccttctcctttcccttatcgcctccgcagcaacttttgtatccgcttcgtttcgtttagcgtccggtttcgttcgatctgtccgatccatagaactcgtgaaaaactgaaaactccctcataggggacagcgtggaaggcagctcgcctccactccccgaattataggagccctgatatgcagcaagtgcacgcaagtaggttttttagcatttaactggaagctggaactcttgatttactgcctgatcaatgtttgggggcagtgaatgaaagaactgctctggcatttgtgctctcccgatttgcatttcaccaactcgacattagcatgttcagaaaaaaaaaatctgtggaccaatagcgtgatttcggcttggatgtgcttgtatgagcataaaactccctgcgaagaagttgtggccatctatatgtcatttttgtactgtttaactatgagaaacataaggagtcgaatctacagtccactgttagctttctataggacaaggtacaatagtactggttctctttctttcatagtctggtgatcactggttgctatccattaatgcaactgcttttatttgttaaggctgtgtttagttccacgccaaaattggaagtttgaagaaattggaacgatgtgacggaaaagttggaagtttgcgtgtataggaaagttcgatgtgacggaaaagttggaagtttgaagaaaaaagctggaatctaaacagggcctaataatgattatgtttggttgtcgcaactttaagtttgcttacctcccacatttatacggttttaatagctagtaacgttttcaagtgttaaaaaaaagtttttgttttattaataatatttattttgtttttttcctgattaattttgcagaggaaacttctaacgatcagcaagataaaaatgatactaacaaaatttccagaaagacatcgcgtggctttgacctgattgagtgtcatatgctgcccatttcacagtcaactaaatcacatggggattcatcaagtagaaatgagaatattgtggaatgccataatgatgttcgtgtctgttacaagctaccttgtgaaggttcacctaaacttaacctagtgtaagtagtctactattttcttcactgtcgtctgtcatattgaatgcagttgtttcctaattaatccttctaccatttatctgatgatactgggaacatccaattgtttttctcttcactaagcccttcatgtggatttaacttcatctatcattaagcattccaccaattagattgtttggcaggatttaacttcagctatcattaagcattccaccaattagattgtttggcaggatttaactttagctatcattaagtgttccaacaattatattgtttggcgcacatttttctagtagttgtgtttattattgtagttcttgtttgcagatacagaagagaggattcccttgaactaaatgacattgtagcttctaacagatacaatattgacactactggacttgtgtgtaagtttcctattcaagtgaattgtttttttttttggtttattgtgtggaaaaggaatttaaatgtatgcagaatatgcacgttcagtttcttgtttactgtgtagaactattttctttcctgtccttgttagccttctatgcacataattttgtctgttaagtctaaaagtggtgctctcctatgtaataggctttgaacctgtatctaatgctaaattcacctatattttagcactactgttctcaaggtctataggttgtttatctgcagtaaactacctagctggctagctggcttgataggtaacttactgtgacatcagaagctgcacaccatgctgtcttgtcagtgatcacttgactttgactcctgttgatgatagagttctaatgaatcctatggtgttcgagaaaaaaaaagaggaattctatgcagcaatgctgtacagagttggaagttccgtattgataagactctgttctgaattatcaacttctctatttttcttgcattgcgcgctatatgtgatatccttcatcttatctccagatacctcaagaagtcaagacatgcttacttttacggttgttgtttttttcccctgaaggttgttggccgtcggaagaggtccttgcgtactactgtatcaaccattcggatatgttcaggttggtacttggttgtgaggtgtattactaatgtaacattcgtgcaccaatattaattgttctatatacatatatataactttcttttatggttgatatctgaacttacatagtggattcaagttcctaagtgaatcacgcattcaactaatactggatttggcaaaagcaatttgctgatctgccattcgtattctccttgggaacttgagtacaaattggtactgtcctggagtcatggcttggttgaacaggatcataggggtgcatcatcgatgttacaaaatactgcaggcttttggtacaaattgtagtaatgccatataggtaatgggacgaggctttgattagtatatgtaagcaagctttaagtacaatctcctctagttttcttcctgtgtttgtcggtgacattttgtcattgatgagattaagatgagaaattcagtatgacatggcgaggtgcattagctcatggtttgcgaactatgtgcgttattacaaggtacattatatagttagtaccttgtgatacattttgctctcatgactaacgtgaagagttgtcaattgtttctttgttgtatcatatgaaactctagttatgtatcttccttgtcccatattacctacagggcaatcccttttcacaaaagacaataacaaccaattgcttctttgcctaaattcaatatatgtattatatatctcagataactgaccatttagatttattccaggtccaagaaggtgcttgagcttggatccggttatgggttagctggacttgctattgcagccagcacagatgctgatgaggtcgttatttctgatggaaatccacaagtagttggatgtatcctttagtttcatttacacataggcttctttgcagtattgactaatacggtgcacatgttgtttttgctaattttttgaaacactaggatgtaatggcaaatcagattagattggtccaaacatcacgcttctatggtctttgtaatccattaaccctcagatattcagcagaatatatccatcaatacagaaacttttggtcaaacaaaagttaaatctatggtacttcactgggatgctgggcaggcttcagaaattattagttccttcgatattattgttgcaagtgactggtatgttgtacttcttaatttactattctttgtttcttaccatttatcgcccatggacagtctttttcctgtattgttgatatcctctggtgttaggctttgagcatgacattacgagatgcatctaaccaatcaatactagattttagtaatgtcagggctcctcattagcatctctgtgcggaaaatgtttttagaagctatatcttgcaactgttttttgattgcatagagtttgataggcatccactgaaagcagagaaatgaagagaacttgttttgttccctctgacgaagatgataatttggaactgagttatttctctagttaatacttaaaaatcaggctagataagtcaaatcaaccaccatcaaaatttctcgataatataatataaaatgcaatgtattagtcggttttaccaggaattttatatacttattcacttgtgctgcagcacatttttcaagcaattccatcagagccttgcacgggttgtcaaatccttgttgaagcattcagaaacctcacaggccattttcctgagcccaaagagaggcgattcactcagcaaattcctagaagtaattaaaaagaatggtttgtcttgtgagttgatagagaagtatgatcccactgtatggaatatgcacaaaaaatatgtatcggatgataacagatcctggcccaactacaatgaagagcactgctaccctctattggttagaattaatagtcacagcaaatagttacctccagacatttcgtttgatctatgatgggttcatttgtgatgtaaaagctttagctagtctatgttgtaatttatacattacaatagaagtgggttatcggttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0243800, RefSeq:Os03g0243800