Os03g0245500

From RiceWiki
Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0245500| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001056074.1 GI:115451876 GeneID:433223...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0245500

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001056074.1 GI:115451876 GeneID:4332235

Length

1269 bp

Definition

Oryza sativa Japonica Group Os03g0245500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7730895..7732163

Sequence Coding Region

7731103..7732047

Expression

GEO Profiles:Os03g0245500

Genome Context

<gbrowseImage1> name=NC_008396:7730895..7732163 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7730895..7732163 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtttgcttcctgcgtcgccgtatgcctcgcgttcgccgttctcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagcagcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgtcgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcggcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggaggggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcgtgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacgacacgcagtccgacagccagaacttcctcgagacgctggagctggtggacgagggcgacatgcgcatcctcgacaagggcggcgagctggcgtggaaggccagcgacgagccgcgcgccgcgcagcactgcgggatgccaggctcccccggtctcgcctcggcgttcccgccgttcgcccagccgatcggccacggcagcagcgacctgccgttcgggttcgggaacggtgaccacgtcgctggcaacggcatcggcggcggcgccgtggcgcagccggagctccccgtggcgccagtgccgcagccggagcttccgttggcgccggtgccgcaggaggctgatctcggtggcgccgccggggtggagccgcagggacagggcgtggggcagacgtcgttcggattcggcgcccagccgctggtggacaacagcccgtacgacagcggcgcatggaagcaggtgggcggatgcagcctcaccgccatcggagttggcttcattctcaacgtcgccattgccatgggcttgggccactga</cdnaseq>

Protein Sequence

<aaseq>MGFASCVAVCLAFAVLLPWHATATSPTGTIQRETKQQILASIPP HWQENPVLFLTSPSGKYTAYFLRSQTAPGAGGLGADFCYVEVLDTSDPGAEGRSVWES ECLAVSTVNTCSLVFSWKGLEVFDGSNSVWHTHDTQSDSQNFLETLELVDEGDMRILD KGGELAWKASDEPRAAQHCGMPGSPGLASAFPPFAQPIGHGSSDLPFGFGNGDHVAGN GIGGGAVAQPELPVAPVPQPELPLAPVPQEADLGGAAGVEPQGQGVGQTSFGFGAQPL VDNSPYDSGAWKQVGGCSLTAIGVGFILNVAIAMGLGH</aaseq>

Gene Sequence

<dnaseqindica>117..1061#acacaaagcccaatcagaaatcacaaagcacaacaaaacctcattgcatctagctagcttttctgtctcctgaatttctgatcagccagcgaaaacccaacgcaagcttggtcaccatggggtttgcttcctgcgtcgccgtatgcctcgcgttcgccgttctcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagcagcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgtcgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcggcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggaggggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcgtgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacgacacgcagtccgacagccagaacttcctcgagacgctggagctggtggacgagggcgacatgcgcatcctcgacaagggcggcgagctggcgtggaaggccagcgacgagccgcgcgccgcgcagcactgcgggatgccaggctcccccggtctcgcctcggcgttcccgccgttcgcccagccgatcggccacggcagcagcgacctgccgttcgggttcgggaacggtgaccacgtcgctggcaacggcatcggcggcggcgccgtggcgcagccggagctccccgtggcgccagtgccgcagccggagcttccgttggcgccggtgccgcaggaggctgatctcggtggcgccgccggggtggagccgcagggacagggcgtggggcagacgtcgttcggattcggcgcccagccgctggtggacaacagcccgtacgacagcggcgcatggaagcaggtgggcggatgcagcctcaccgccatcggagttggcttcattctcaacgtcgccattgccatgggcttgggccactgaaatactgaattcggagaattcgagggcatatatggtagcttcggtgcttggatgatcacgtacagttacgtagtggtttctttgaaattaatggtgatttaactctggcacaagaagccagcggatgtgcgtgctgtgtgtactggtgtgttgcaggtggtgctttttctgggtgtttggttgtattagtatcgtgtttggaaattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0245500, RefSeq:Os03g0245500