Os03g0246500

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0246500| Description = Protein of unknown function DUF869, plant family protein| Version = NM_001056079.1 GI:115451886 GeneID:4332240| Leng...")
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Gene Name

Os03g0246500

Description

Protein of unknown function DUF869, plant family protein

Version

NM_001056079.1 GI:115451886 GeneID:4332240

Length

8368 bp

Definition

Oryza sativa Japonica Group Os03g0246500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7790316..7798683

Sequence Coding Region

7793081..7793170,7793912..7794107,7794342..7796697,7796799..7796859,7797845..7798264

Expression

GEO Profiles:Os03g0246500

Genome Context

<gbrowseImage1> name=NC_008396:7790316..7798683 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7790316..7798683 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcgtcgcagctggccatggaagaagaaatcatctgacaaatcatctagcgcagatgcttctcaaaattccaatcaagctgagcaggatgacaaagctccaaaatatgtgcagatttcaccagaaacatatgcacaccttactgaatcagaagaacaagtgaaaaccttaaatgaaaaggtgaaggccttgaatgaggacctctctgcggcacagtctgagatcactactaaagatgccctagtgaaacagcatgctaaagttgctgaagaagctgtatcaggttgggagaaagctgaagcggaggcctcagcactgaagcttcagctagaaactgttacattggctaagctagcggctgaggaaagagctgcccatctggatggtgctctgaaagaatgcatgaagcaagtaaggactgtgaaagaagaaggtgagcagaagctacatgatgtagtctttgcaaaaaccaaacagtgggagaagataaaggccgagtttgaagcaaagttacttgagtttgaacaggagctcattagggctggtgctgagaatgatgcactctcaaggtcactcgaggaacggggagaccttttgatgaagattgatgaggaaaaggctcgagcagaggctgaaatcgaagtcttgaaaaacacaattcagtcaggtgaaagggaaattaattcactgaaatatgaaattcatgttgtttccaaagagcttgaaatccgcaatgaggaaaagaacatgagtgtgcgctcagctgatgttgcaactaaacagcacatggaggatgtaaagaaaatatcaaaactggaagctgaatgccaaagattacggggtcttgttcgaaagaagttaccagggcctgctgcattagctcaaatgaaaatggaagtggagagcttgggcagagattatggagaaagcaggttgcgacgatcgcctgcaaagaattccagcttccatcgtcctatgtcccctatgtcccctgttcctgattatgcatttgaaaacttacagcacatgcagaaagagaatgagtttctgactgcacgtttgttatccatggaagatgaaaccaaaatgctaaaagaggccttggccaaaaggaatagtgagctgcaaacatcaagaaacatgtatgctaagacagcaggcaaactccgtggcttggaagttcaaatgttgactggtagccaacgtaagagtacttcgaatcccaacatggatatccactttgatggtgcactgagtcaaaatggaagcaacccacctagtatgacctccatgtctgaagatggtgttgatgatgaaggaagttgcactgaatcttgggccaatgctctggtctctgagctctcacacatcaagaaagagaaaggagctaagagcagtgtgacagaaggctccaatcggttggaactcatggatgacttcctagagatggagaaactagcctgtttgtcatctgaagcaaatggacatgtcagtactgttgaaaaaatgaagattgatgatacggaagcttctttgtctggtattactgaaagagatggtgttaaagattcgcagtcagttttggcattgccagggactccatctaataaactgcagctgtctgacagctctccactcttgaaactacagtctagaatatcttccttgcttgattctgaatcaccacagaacaatgctggaaatatactagatagtatcagaaatattctaaaggatattgaagatgaggcagattcatcaaatgatagcaagactcatcatggtgacatggttgaagtagctgacaatggatcactaatgaagcattcaagcagcgggagcaagcatgctatggatcaagaactagtcaatgccattttaaagattcaagacttcgttaagtcacttgaccaagaagtgtccaagttccaagggcagtcttcagattgtgatggtttatgtgacaaaatacagcagttctctgcactagtagagaaagctctatcaaatgagaatgttctaaatgacattgttatgacgctgtctcttatcttgtcaggaaccagtgagattaagttcatgatgttgaaagagaacaccaaagaagctgacaataataatttggattatgttgataaagtgactttacttgaaaataaagtgcagcttgagccactaaaggacagcatttctggtccttgccttcctcgttcatcttctgatccggagattgaaggtcctactgactctggatgtgatgtcaagactgctgtgcagatatgctcatcagaggaattcgagcaacttaaatctgagaagttgaatttggaggcagaattatcaaagtgcaatgaagttatagaagagacaaaatttaggtttaaggagttggagaagagccttgaagagttgacatccaagttggttgccagtgagaaatcaaacagcttggctgagacacagttgaagtgtatggctgaatcctacaagtcacttgagtcaaggaaagctgaattagaaaacgaaataaaagtgctgcagtccaaaatagaagttttgacagctgaacttgatgatgaaagacaaaatcatcaggaggatataacaagatatagagatctcgaggagaagattgaaaggtatgagaacgagaggaattcaatgtgtgtggatgaggatgcagataccaaagcaaagcaggagaaagagatcgcagctgcagcagagaaacttgcagaatgccaggagacgatattgattcttggtcgccaactacaatctatgcgtcctccagcagaatcaatgggttcctcgccaaaccagcgaatggaagatttcctgcaggacgcggctggaacaaccgaaggtgttgaatactcacagaagccaacaggtcaactggatacagatcaggaaatgcatgcatcaggaaatgaatccccagtgaatgggtacaagacacacaatgccccctctgaagcggacggaagccctttcctttcaccaaacggatccaagcgcccaaagcatagatcgagatcatcttcctcaatttctaaccaattgcccgagaaacaaaaccggggtttcagtcggttcttcgccaaggaaaagatctaa</cdnaseq>

Protein Sequence

<aaseq>MDRRSWPWKKKSSDKSSSADASQNSNQAEQDDKAPKYVQISPET YAHLTESEEQVKTLNEKVKALNEDLSAAQSEITTKDALVKQHAKVAEEAVSGWEKAEA EASALKLQLETVTLAKLAAEERAAHLDGALKECMKQVRTVKEEGEQKLHDVVFAKTKQ WEKIKAEFEAKLLEFEQELIRAGAENDALSRSLEERGDLLMKIDEEKARAEAEIEVLK NTIQSGEREINSLKYEIHVVSKELEIRNEEKNMSVRSADVATKQHMEDVKKISKLEAE CQRLRGLVRKKLPGPAALAQMKMEVESLGRDYGESRLRRSPAKNSSFHRPMSPMSPVP DYAFENLQHMQKENEFLTARLLSMEDETKMLKEALAKRNSELQTSRNMYAKTAGKLRG LEVQMLTGSQRKSTSNPNMDIHFDGALSQNGSNPPSMTSMSEDGVDDEGSCTESWANA LVSELSHIKKEKGAKSSVTEGSNRLELMDDFLEMEKLACLSSEANGHVSTVEKMKIDD TEASLSGITERDGVKDSQSVLALPGTPSNKLQLSDSSPLLKLQSRISSLLDSESPQNN AGNILDSIRNILKDIEDEADSSNDSKTHHGDMVEVADNGSLMKHSSSGSKHAMDQELV NAILKIQDFVKSLDQEVSKFQGQSSDCDGLCDKIQQFSALVEKALSNENVLNDIVMTL SLILSGTSEIKFMMLKENTKEADNNNLDYVDKVTLLENKVQLEPLKDSISGPCLPRSS SDPEIEGPTDSGCDVKTAVQICSSEEFEQLKSEKLNLEAELSKCNEVIEETKFRFKEL EKSLEELTSKLVASEKSNSLAETQLKCMAESYKSLESRKAELENEIKVLQSKIEVLTA ELDDERQNHQEDITRYRDLEEKIERYENERNSMCVDEDADTKAKQEKEIAAAAEKLAE CQETILILGRQLQSMRPPAESMGSSPNQRMEDFLQDAAGTTEGVEYSQKPTGQLDTDQ EMHASGNESPVNGYKTHNAPSEADGSPFLSPNGSKRPKHRSRSSSSISNQLPEKQNRG FSRFFAKEKI</aaseq>

Gene Sequence

<dnaseqindica>2766..2855#3597..3792#4027..6382#6484..6544#7530..7949#gcgtctctcctccttcccccaccaccaccgccaccgccactccattgatgctagatagggagcaggggcgagaggtgggcagccgcattaccaaaccgggagacgccgcctcgagctagtgctcgttgcagcagcaggaggaggtggtggtggtgggattccagagggaagaagaaaaggttgcgggagcaaaaggggaggagggaggcgagggccgaggggaaaaagggagaggagtgggggtgaatcatccaatccacagtccagctcctggtgtgcagtgcggcgctgatcggttgaggaggtgtgagcggcaaggtacgcgtggccgtcgtcgtctccgccgccgccgaagccaccgacacgccggccgggtcgatcggagccgcgggtcagatccagttcacgccggaattgcggcggattccggcgaccgtgaccccgccggatctgcattccgcgtggagcctccccgagccgcgccctcgcctcccgtaaggctccgaatccctttgctgcgtgcctgcttaattttttcccgtgtttttccttcgttgttgctaatttgcagccctgtgattgcgcgtctgtgttcctgcaatgcttgcgatttttgttttttggtctggattgtttccaggaaattatgctttgtttgaggcttttacgtcggttttatttttgaactttgaacagtagtactagtgagaagtgcgctgcgagctccctgttcaatccgctccatctgaaaatttcactgtttattcttatttccagtttctgactttttttttcccgttcaccggtcttcttctttttttgccctcccggactttgcgcttcgtgtttccttgtcttgtttgggccaaagaaactactagtactattatgatcaatgggcagtgaaatcaaatcgcgcggtgtcggttcggcaacgcactgtcgcgcttgcgagggtggaatcaccgcgtcgtgctcgccctgttcgggcgcttcccttgtccttgccgttctcgcgctccgtctttaccccctcctcgacgagttcttcttccccccgaacattcaatcccatccgatggaacacatggtacagatttaacccgtgaaagaatccggcaagtacggccagcttcacttcatccggtgggggtggaatgattgatagaagtagcggccggggagtagtagtacagcgctgccactgcgagattagtaaaaggagatggtagaaaaaggacaaccccacttgagcccgcaaggacgagggatttattagtagtagtgagtaggctgaagtatagcgcatctggtggctcaagcccaaatctgcccagcaaataccgccattaatgggcgtatcatgatgcttagagagtggtactggtactagtagtagctctccgcttttactccggctcacgcgcgcgtcctcgatacgacgactcctactgctagcagatgggacggaatgactgatgatgaggagcagcagtgcagcacagtaagaaaccaatggatccttcttccttgacacggggcaaggcgagcagcagtaggtgtccggtcatctcggcggaggcttccgttccgtccggcctaaccctccggatgggcttaaataaacattcgctgtcccacgccggcgatttactctcgcgggcgtcttaggtggcagccttaactgactctctcttcgccgagcgacagtggcgcgcgattgccgtatcgcgtcaagctctacagcctggtgatgctgcatgctgcggccatgcgcgcggtgatggtccacggcgtggatagagagatactggccgccttaattaagccgctctgtgcgtgtgtgtgtcatgagtgcgagaagtacatggcacggcgattacttcccgcgttcgacgttctggcatgacggtgatcggatccggtccggtggtctgcgctgtgcgccgccaacttggtcgctcgtgggggccgccgccgccgcgtgtgctgactgtagtattagtaccctttgttcttgcttcaaaggttggatttcttatgacggaattagtagtggcctgggcttgtcctatcctatactactgttctaggtctattgtaacagaaacctctgcttctggatcatcgggtgtgtgtacacgtcgccagtggatggaatgtatgactatggagccgtgaggtacgcgtggtttatgtaccttgcactttgatgagtgataaaggggtggttgattatattattgtactactcaccatatatggtggaattattgtgcactgaagtgtgtattatacttgcccaaccactcgtctttcactgttcctatgactttttactatatgcaatttgggttctttccagcagtatcaattatagaagttgtatggggtgcgcaggaaaatgtttacttattttggtggttagttcttttgtctggagctatatgttggttgcatgatatatctttcttttattttcaaaacacacatcgcctcgtgtcttcttttcagaactgttaatcctgaaacttttcattggtgtacaagaaaaacgtttattttgatgtgggttacttcatttttctaaaacattacatctgatgacatgtctatctactgttttacctttgtattgttgtcagagttggtgacaatataattagcttcagataatttgtccacctttatgctggatatagatacttactcgtcacaattggcttatcttgatatttaccttatcgttagatacattgtgcctgatggatcgtcgcagctggccatggaagaagaaatcatctgacaaatcatctagcgcagatgcttctcaaaattccaatcaagctgagcaggtttgtgttgctttcggtgttcacctgtagttagaatccttgagaaatgccattttacttggaggaagtcccaatcacaaactgtgacttattaatgccattttattaagcaaccctgcttgtacctgtgggtgctgcaaaatttgaagttatggaaagtactgggttgcaacgaggccattttttttttgactaaaacgaggccatttattagctattggactggtttatttgcattttgtccatttatatttaaaatgaaaataactattcatgtttgtggtagattcgttcatgattgattttgtatttgctgatttagttttatataggccctctctgatgctcaattaaggactacactatatcactcacatagtattttgtttcattttctttcacccactgtaccgcagaaagacataatttttttttctacatataattttgtcaaagagcaactcattgcatttttgtttgtggcacacaaaatttattagggaaaatttagattatgacatattttgctaactgctaaagtacatactgctgtgtggagtcagtagaatacccataggggacatcggtattaccagttcatttgatatttgtttgcatttattcttatctctaaagctgacattataaatggaattgtctactggtgcatcctgaaagttttccaattttaccttacctttacatgtttatttcttctaatgccatgtttccacttttcaggatgacaaagctccaaaatatgtgcagatttcaccagaaacatatgcacaccttactgaatcagaagaacaagtgaaaaccttaaatgaaaaggtgaaggccttgaatgaggacctctctgcggcacagtctgagatcactactaaagatgccctagtgaaacagcatgctaaagttgctgaagaagctgtatcaggtgcacagaggatcactatgttcttttactcttcctatttgagtagaataacttactaactactacttttattttcataaaccttgtgctagtggatgttggtataggtggtactgctctctttaaagtggaaacagaattcggccattcatatgttttcttaaaggttgaatgatttataaaactgctacagtagatgtatttttgatgggctatatgctttgtcatgtttaggttgggagaaagctgaagcggaggcctcagcactgaagcttcagctagaaactgttacattggctaagctagcggctgaggaaagagctgcccatctggatggtgctctgaaagaatgcatgaagcaagtaaggactgtgaaagaagaaggtgagcagaagctacatgatgtagtctttgcaaaaaccaaacagtgggagaagataaaggccgagtttgaagcaaagttacttgagtttgaacaggagctcattagggctggtgctgagaatgatgcactctcaaggtcactcgaggaacggggagaccttttgatgaagattgatgaggaaaaggctcgagcagaggctgaaatcgaagtcttgaaaaacacaattcagtcaggtgaaagggaaattaattcactgaaatatgaaattcatgttgtttccaaagagcttgaaatccgcaatgaggaaaagaacatgagtgtgcgctcagctgatgttgcaactaaacagcacatggaggatgtaaagaaaatatcaaaactggaagctgaatgccaaagattacggggtcttgttcgaaagaagttaccagggcctgctgcattagctcaaatgaaaatggaagtggagagcttgggcagagattatggagaaagcaggttgcgacgatcgcctgcaaagaattccagcttccatcgtcctatgtcccctatgtcccctgttcctgattatgcatttgaaaacttacagcacatgcagaaagagaatgagtttctgactgcacgtttgttatccatggaagatgaaaccaaaatgctaaaagaggccttggccaaaaggaatagtgagctgcaaacatcaagaaacatgtatgctaagacagcaggcaaactccgtggcttggaagttcaaatgttgactggtagccaacgtaagagtacttcgaatcccaacatggatatccactttgatggtgcactgagtcaaaatggaagcaacccacctagtatgacctccatgtctgaagatggtgttgatgatgaaggaagttgcactgaatcttgggccaatgctctggtctctgagctctcacacatcaagaaagagaaaggagctaagagcagtgtgacagaaggctccaatcggttggaactcatggatgacttcctagagatggagaaactagcctgtttgtcatctgaagcaaatggacatgtcagtactgttgaaaaaatgaagattgatgatacggaagcttctttgtctggtattactgaaagagatggtgttaaagattcgcagtcagttttggcattgccagggactccatctaataaactgcagctgtctgacagctctccactcttgaaactacagtctagaatatcttccttgcttgattctgaatcaccacagaacaatgctggaaatatactagatagtatcagaaatattctaaaggatattgaagatgaggcagattcatcaaatgatagcaagactcatcatggtgacatggttgaagtagctgacaatggatcactaatgaagcattcaagcagcgggagcaagcatgctatggatcaagaactagtcaatgccattttaaagattcaagacttcgttaagtcacttgaccaagaagtgtccaagttccaagggcagtcttcagattgtgatggtttatgtgacaaaatacagcagttctctgcactagtagagaaagctctatcaaatgagaatgttctaaatgacattgttatgacgctgtctcttatcttgtcaggaaccagtgagattaagttcatgatgttgaaagagaacaccaaagaagctgacaataataatttggattatgttgataaagtgactttacttgaaaataaagtgcagcttgagccactaaaggacagcatttctggtccttgccttcctcgttcatcttctgatccggagattgaaggtcctactgactctggatgtgatgtcaagactgctgtgcagatatgctcatcagaggaattcgagcaacttaaatctgagaagttgaatttggaggcagaattatcaaagtgcaatgaagttatagaagagacaaaatttaggtttaaggagttggagaagagccttgaagagttgacatccaagttggttgccagtgagaaatcaaacagcttggctgagacacagttgaagtgtatggctgaatcctacaagtcacttgagtcaaggaaagctgaattagaaaacgaaataaaagtgctgcagtccaaaatagaagttttgacagctgaacttgatgatgaaagacaaaatcatcaggaggatataacaagatatagagatctcgaggagaagattgaaaggtgaaactgaaaatttttttttattattgattaatagttggtacaaagatatcactgccctctgctaggtttttcttcttacttaatccattgacatgaaggtatgagaacgagaggaattcaatgtgtgtggatgaggatgcagataccaaagcaaagcaggtatgaacaacaaactttggatcttctacttcccaatatctttgcttaatgagtaattttacagtccttgagaggtaccaataggtaccaacatttttagtgcaaattttggtacctcttagtaccggaggtaccagattttaaacaagaaaatgtggtaccttccggtacctcgtcaatgactgtaaaatcactcttgtttaatacttcccctgtcccaaaatataagcacatatgtgttagagaaaaaaaaatgtcattgacaagcgcccaagtcctagaaatgccatcgacaagtatgagtttcaagaaatgccatcgtacaaacgattttgtcccaaaaatgtcatcgccgttagggtttcgtccattccacgccgttaagttctataggatgaatagtgtatttaacggcgcggaatagacggaaccctaacggcgatggcatttttgggacaaaatcgtttgtacgatggcatttcttggaactcacacttgtcgatggcatttctgggactaagatgcttgtcaatgacatttcatggattatctaaaaaaaaacacttttggagtttttcacgggatcaaggaaacatgtgaaattaaatgggggatgattgtgctttgttgagatgaggaattagatagagaaattaaatgtgaggtagctatgattttgaacaatacaagttgctatattagatagagaaattatcttcgagatagggctgctgatacattttgttcatgtgttgtttattattattcttgtagaaatgctttcgctatacattttcatttgtaaatacaggaaaaagtatgatactattagatcacttactagtcaaatcaataggctgaatttagattcatactaacttatttcaggagtacttagaactgtactgtgcgcaaaactgatattttctggaaattccaggcatttgactgacactgacagcacattcgtttaaaatgttgacaggagaaagagatcgcagctgcagcagagaaacttgcagaatgccaggagacgatattgattcttggtcgccaactacaatctatgcgtcctccagcagaatcaatgggttcctcgccaaaccagcgaatggaagatttcctgcaggacgcggctggaacaaccgaaggtgttgaatactcacagaagccaacaggtcaactggatacagatcaggaaatgcatgcatcaggaaatgaatccccagtgaatgggtacaagacacacaatgccccctctgaagcggacggaagccctttcctttcaccaaacggatccaagcgcccaaagcatagatcgagatcatcttcctcaatttctaaccaattgcccgagaaacaaaaccggggtttcagtcggttcttcgccaaggaaaagatctaaaaaaagctgcttgcaagatgctagcgttggcctgctgattctttactgtgaatgacgggatgatgcaagccacgagttttctgtagagctacttgtgtattcttcgaggtgacgccttcagttgctggaataattcttcttcgctcgaagtcgagcggttaaggccagatttatttgtgagaatgtttagccatccgtacctccgtcccgctagagtgttctgggttgccgtgtgtttgaaacctcactgagacctcactgtacatgtgcttacttgcatgaagataatcgttgttggtttgtgtgtcagtgtcacacacctcttgtgaattaacctgtgtagtttgctcaaaccaagcttgctgtacagttaacctggattaatccgaaggttatttgttgtgcttgttgaccattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0246500, RefSeq:Os03g0246500