Os03g0246900

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0246900| Description = Similar to LOB domain protein 16| Version = NM_001056081.1 GI:115451890 GeneID:4332242| Length = 1640 bp| Definitio...")
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Gene Name

Os03g0246900

Description

Similar to LOB domain protein 16

Version

NM_001056081.1 GI:115451890 GeneID:4332242

Length

1640 bp

Definition

Oryza sativa Japonica Group Os03g0246900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7816387..7818026

Sequence Coding Region

7816387..7816845,7817658..7818026

Expression

GEO Profiles:Os03g0246900

Genome Context

<gbrowseImage1> name=NC_008396:7816387..7818026 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7816387..7818026 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcgggaggcggagccagcagcgcgctcggcggcggcggcggcggcggcggaagcggaggaggaggaggagggccgagcggcggcggcggtggaggaggcgggccgtgcggggcgtgcaagttcctgcggcgcaagtgcgtgagcgggtgcatcttcgcgccctacttcgactcggagcagggcgcggcgcacttcgcggcggtgcacaaggtgttcggcgccagcaacgtgtccaagctgctcctccagatcccggcgcacaagcgccccgacgccgtcgtcaccatctgctacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgcccacatcttcgccctccagcagcaggtggtgaatctccaggccgagctgacctacttgcaagcccacctcgccacgctggagctgccgtccccgccgccgctgatgccggcgccgccgcagatgccgatgccggcgccgttctccatctcggacctcccgtcgtcgacgagcgtcccgaccaccgtcgacctctcagctctcttcgacccgccgccgcagccgcaatgggcatcgccgctccagcagcagcagcaccaccaccaccagcaccatcatcaccaacagcagcagcaccagctccggcagccctcatatgccacgctggccagggcgccgtccggcatgacggcggcggcggagagctcgggaggaggaggaggaggcggcggtggagaccttcaggcgctcgcaagggagctcctggatcgccacaggtccgcagtgaagctcgagcagccgccgccgccgcactctagatcatga</cdnaseq>

Protein Sequence

<aaseq>MSSGGGASSALGGGGGGGGSGGGGGGPSGGGGGGGGPCGACKFL RRKCVSGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLQIPAHKRPDAVVTICYEA QARLRDPVYGCVAHIFALQQQVVNLQAELTYLQAHLATLELPSPPPLMPAPPQMPMPA PFSISDLPSSTSVPTTVDLSALFDPPPQPQWASPLQQQQHHHHQHHHHQQQQHQLRQP SYATLARAPSGMTAAAESSGGGGGGGGGDLQALARELLDRHRSAVKLEQPPPPHSRS</aaseq>

Gene Sequence

<dnaseqindica>1182..1640#1..369#atgagctcgggaggcggagccagcagcgcgctcggcggcggcggcggcggcggcggaagcggaggaggaggaggagggccgagcggcggcggcggtggaggaggcgggccgtgcggggcgtgcaagttcctgcggcgcaagtgcgtgagcgggtgcatcttcgcgccctacttcgactcggagcagggcgcggcgcacttcgcggcggtgcacaaggtgttcggcgccagcaacgtgtccaagctgctcctccagatcccggcgcacaagcgccccgacgccgtcgtcaccatctgctacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgcccacatcttcgccctccagcagcaggtactactaccacttgcttaactccatgatttgatttccaacgagtttgatatcgactgatcgatccatcggcttgattgattgattgatagtattgtttgatttgcttggaaaatccttggtctacttctgctgcgtgcatgcatgcatggaccgatcgatgcgtatggatctggatcgtcgtcttgtcctcaagctagctcatcagcagttggggggacaagacgattttctggagtaggcgtgtttctttctcgagaaaggcaaggtctctttccatggaggaaaccaacacggccaagccaagcaacgagcagtgcgaaaaagaggctaacacgccaagcgtgtaaccaggagactgtttccctgcatctggtagtacctgccatgaatgatatgcaagtctcatccgtcgccgtccgcgtcgtccgatctcgatcgatctctatcgacgggatcgatatatgatcgtacgttcaccgtctggccgcgtgtgaaatcttgggctctgaacaatccacgaagtggtgggagtacttgtgcttggttttcgatctgacctctcgaaagaacagccctagcgccaatctctagtcctagaaatccaaactttgagttctttttctaccaatcatttgatgatctgtttgcacaattcaactcgttaatttcatctcgttattattattacatgcatgtgatctactatatgtgattgcgtgatttgaaccttgcacgtactaacagttttttctgtactgatgcatgtacgtttctgccacgtacgatcttgtgatcatgtactcccacaggtggtgaatctccaggccgagctgacctacttgcaagcccacctcgccacgctggagctgccgtccccgccgccgctgatgccggcgccgccgcagatgccgatgccggcgccgttctccatctcggacctcccgtcgtcgacgagcgtcccgaccaccgtcgacctctcagctctcttcgacccgccgccgcagccgcaatgggcatcgccgctccagcagcagcagcaccaccaccaccagcaccatcatcaccaacagcagcagcaccagctccggcagccctcatatgccacgctggccagggcgccgtccggcatgacggcggcggcggagagctcgggaggaggaggaggaggcggcggtggagaccttcaggcgctcgcaagggagctcctggatcgccacaggtccgcagtgaagctcgagcagccgccgccgccgcactctagatcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0246900, RefSeq:Os03g0246900