Os03g0247000

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0247000| Description = Clp, N terminal domain containing protein| Version = NM_001056082.1 GI:115451892 GeneID:4332243| Length = 6000 bp| ...")
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Gene Name

Os03g0247000

Description

Clp, N terminal domain containing protein

Version

NM_001056082.1 GI:115451892 GeneID:4332243

Length

6000 bp

Definition

Oryza sativa Japonica Group Os03g0247000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7823191..7829190

Sequence Coding Region

7823511..7823543,7823634..7823761,7827269..7827448,7828494..7828603,7828670..7828705
,7828905..7829116

Expression

GEO Profiles:Os03g0247000

Genome Context

<gbrowseImage1> name=NC_008396:7823191..7829190 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7823191..7829190 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccgccgcccaggccgccgccgcggcgttcctctccttcctctcctcctccccgccgcaccacaccgcgccctcatcctccgtctccttcctggcagcccgtgtgctgcccgcctccctcagggccgctgccgcggggtccccaacttccgcctcccgctcccggggccgaggtgtcgcggccgtcgtcgctcagctccccaccgcgaatccagaggtggcttctggggagaagaagatccggtggtcatcacgagcggtgaggtcatttgcaatggcggagctggaggctcggaagatgaggtacccaaccactggcactgaaggactcctcatgggcatccttgtcgagggaactagtgatgcagcaaaacttttgcgtgctaatggaattacgctgctcaaagtgcgcgaggaggcagcaaatgtgcttgggaaatcagaaatgttctactttagtcctatgcacccaccattgactgaagctgcacaacgagcgcttgattgggctatcaatgaaaaactgaaatcaggtgaagatggagaagtaaccgccaatcatctgctcctggggatatggtcagataaagagtcagctggtcataaagtattggcttcccttggttttgatgatgagagagccaattcactggccaaaacggctggtgaagaggctgctatgagtcctagatag</cdnaseq>

Protein Sequence

<aaseq>MATAAQAAAAAFLSFLSSSPPHHTAPSSSVSFLAARVLPASLRA AAAGSPTSASRSRGRGVAAVVAQLPTANPEVASGEKKIRWSSRAVRSFAMAELEARKM RYPTTGTEGLLMGILVEGTSDAAKLLRANGITLLKVREEAANVLGKSEMFYFSPMHPP LTEAAQRALDWAINEKLKSGEDGEVTANHLLLGIWSDKESAGHKVLASLGFDDERANS LAKTAGEEAAMSPR</aaseq>

Gene Sequence

<dnaseqindica>5648..5680#5430..5557#1743..1922#588..697#486..521#75..286#atcgcttcccctatcaaccctcagaacccctcccctccccccccccccccctcccccgaaaacctccgcccgccatggcgaccgccgcccaggccgccgccgcggcgttcctctccttcctctcctcctccccgccgcaccacaccgcgccctcatcctccgtctccttcctggcagcccgtgtgctgcccgcctccctcagggccgctgccgcggggtccccaacttccgcctcccgctcccggggccgaggtgtcgcggccgtcgtcgctcagctccccaccgcgtaagagcaagctactaatgctcccaaccccactcatcaatgtttatcatgaaatactccttcacttcgggtgtttctcaaagtccctagtccctctcttcgaatttagctcataagagtaaccaattcgattgcgagatttgagttttgtatttttggatcctgccacttttgatacggtgattgacgtttttttcaggaatccagaggtggcttctggggagaagaagatccggtgagtacaatttctcttgatattccggttccatctgtctatattggggagctgacacgggtttaggtggtcatcacgagcggtgaggtcatttgcaatggcggagctggaggctcggaagatgaggtacccaaccactggcactgaaggactcctcatgggcatccttgtcgagggtgaggcaaatgatcttggattatcactgaaatttgttcgcttgcatctctggtgcctaagggggtgaattatttgtgaattgtgatggaaattggaacagatgagtggggaaagagaaaaaatatgatatacaaggctataggggttaaacctttgtagtggcatgaaggttttacaaagatactataatggcattttccttacttaaaatacgtttatacaaaactgtagaagtcagggtaattttggtgcacgtctacatgcctcatgcatgttgaaaaatatggagcagcatgccaaatgcaaacacaatggaatactatcgaataataaatcatctgccttataggttgtaatattcatcatctgagtgcagagttattaagttctcaagttcctattgttctatccatgtacatccgcaatagtgacacctggagtctctagtcatggaaaatataagaaagaaaaaaaaaggccattttaatgtagcctcattggtatttcttccagaatgagtagccaggataacacagtaaactgtctaaaaagtaaacatgcttcaatgtaaaacagttgggagtaagacaacccttttggttcataatgttaacaatgtttagacctttgcttgctgacttatgtagattttgtgtgatggcgtccacaaataaatccaatgtcttctataaaaataagatggagagagactatgataatttaggggtgttggtaaactctgcaattctagcctcaacctttgattggttttcagtggttcagatatgattgttttttttcaggttttattttgatttgttgggacagtagcaaactgcgctgtgctctgagactatgttcacgagcctacataagatataagcctctaaactgtcaggagttcttattgacatcttaaaactgtaattgacgtatataccatgaaagtacccagctgttgaactagcattcgtagttcctttttggtttgctacttcattatgctcatgggactgcacttagtcgcaacttcattgcttacaggaactagtgatgcagcaaaacttttgcgtgctaatggaattacgctgctcaaagtgcgcgaggaggcagcaaatgtgcttgggaaatcagaaatgttctactttagtcctatgcacccaccattgactgaagctgcacaacgagcgcttgattgggctatcaatgaaaaactgaaatcaggttacttctcttttaaatatgaatccatttattgttcaattcttatttaggtccagaagacaatcagttgactgtctttagttttggtctttgatgaaactcatgtctttttcttactgttttggtactcttggacaataggcagattttttttttcatgtttgtagaacagaagtgtttgcatattgtatggttacttccatttttagtgatgttttactattggatttagttgagaaaattatttgattcatggagcacattgtgttgcttaataattctacacttgaatttgttttttattctctcgtagtttacatcttgattcttgagccttactattaattacactttgactatcgtaaatttatagtctatttcatgcaattcgatcagatatatgcatctactgtctccgattcatcggagcaacggtccaaaatatgaattttcacgcaacaccgctggcatatcttgtgatttcatttctggaaagttagttgcattgattatgacttgttctcaataagtcaatatgaagtattggtgagttgctttgcttaatcactaaggattcttggtcaccgctcaatgtggtgtctggcattgttgagctgcaataaccctacaactacatggtgcaaccttcataaattaccaccttccttcagaacgtagtaaatataaaatgctttgtaattctaaacttcttatcctagcatttcagagtcaatacacttgtatgctactggtactagctatatcggttgaatgaaggatgtaattttatttgccatatcatgttcttgtttgattggtttgttcagcagagtttagcttctttcattggctgatattttattgtcttagatatatttatctagtatcttagacaacatttgtcatttctgtggattacgataatcttgtttggtgccatttcttttagacaatttggcatttgtcaaactgcctttgttttcaatttatgttgtaaagagtattattattatgttctgaaaatatggaacaattggcgggagagacatgacagtttaacgtatttttgtctaaccttaatttcatctataaaaccaactatagtgactatgagtaatgctcggatattttatgataagctaaaaccagaaacaaattaaatgatgtgttcgctttcactcctctctagacagttatgttgggctccaatgcaaactaagaacaatgatacagttatgttgagcttcaacgcaaattaagaataatggtacttcattcagttagatgatgtggtccaaactggacatatgatcctccatactgtacaaagttaccgttttcagtaatgatgaatcaagaatagacttattctatttcttttactaacagtggtttctacctattggagtaggcattgcatgcatcaatatgataggtgtaccaataggattgcactaatattctaggacatatgttgttagttttatgactcttttgacattggtcccttggcttgttgaactaatcaccaaatctcctgtttgaaaatccctctccttctttttttttttttgtaaatgatccatatatttatcagatgtctgacgagtgagagaatggctgtacagaaagatcaagtggcatagaagctccagtgaataggacttgtcatggttgaaccattagtctgtatagcaaatatcagaaagtgatattctgtgtctccttcagtacttgtagaccctgcccttatgtctactttatggtgtaacaaatggagtaagcataagccaacaattcacaaacttggttctaaatatttggttgttcattggaatcagtatacttttgatagttgccaaaattatgtcaggattatgttgacactagcgtctcagtttttttttttttgacgaatctcgctaaatttcaaggtaacatgtctgtttgttcaaatttcggtgcaaattgctagtgcaaaatgtatcaagcccacccaaatgtgctatttagtgacttaaaaagcataggagtcctaaaacctacttaataatttctttaaatacatctttgttgcttgatggtgtattgctaagttccttcctgttatggtttgagaaaactaattcagagaatcatacataccagatatgttgcaactagacagtatcttgcatgcaacctagtatcctagatctccgtcagctaatgctgatttctcagcccagcataacatcatttgatgtcattttgcaaaagaaaatactgtttagtgtttaaacagtattgtgtcatttttttttgtgtgtgtgtgaagaggatttaaagctgcagtggtgccttagcaattgtctgcaacgaagcggtacataatgatctgatagtctgatgtattactcttgcactgattatgctgattcagtagctcttagcccatagcagttagtaccataactagcttggtttgacaattctagctccaaattcgtgagatgttatatgcagacataagtaacttatgacagaccaactgtgcagtgttatgccagtttctgtttgtttgaaactccaacatggctaatttaaatggagagaatattggatcaagcatgaagtcagtattgaagcttttctggatgtcattttgccttagagattgtatttttttagaagtatctggaactgaagtcatattcttgcctcttggtacttgaatgtttggtataatactccctctgtctcaaaatataagaatctgacatttcctagtactacgaatctgaactggagtagatatcaactatagtaatagttttaaattgaatcagaacctttacacgaaatgactgttccctggtccaactgtagctacagtcagtctagaagatgcttacagcttagtaggtttattgctacgtgttgggtctaagactactctgaaagtctaaggctagaggcctgggtagtgaattttgactggagttttacgtggaaaggaccattgtacttcaatagatttgttttgtttatgccagctcctccttaattacactttggtttattgatgctaatgcaattataatcgagcatgaataaccttccgcatctctttaactttttttgccaatgtacaatgaggacatatccggtgaaaatgagctaattgttggaaactcgtgaaaattatacctaaaagttttgcaaattcatgaaaaaatactagagataggtgtatttatgaaatacgttctccaattctcaacttcatttaagagaaacaaaaaagacaaatttcgggtgaatagtgtcatgttactattcacctgaaatttgtctttttcgttactcctaaataaagttgagtttggagttgagatttggtgagaatgtatttcatatctacacctatctctaggatttttttttcatgaatttacaaaacttttaagtatgataagcatcgttgctactatagcattctctgatgatttgaattctgattaaaaggtgaagatggagaagtaaccgccaatcatctgctcctggggatatggtcagataaagagtcagctggtcataaagtattggcttcccttggttttgatgatgagagagccaattcactggccaaaacggtaatgctctattttctttcaaaatgtatatgcttcaaagagcgcatatgtaccatttcatggtttctcacatctttaaatcttgtgcaggctggtgaagaggctgctatgagtcctagatagcaaaaggagccttatagtttactactgaacttccctgtgatgcaatgtgcttgcgtttggaacctcaagtaacttcttggcgactccagtatcatggcccacgcattaagttaacttgaagagattgcttctacaagttttagggctttattaagattgttagactgaatgcaatatgtcagactcccctattgcccatacctgtaaaagcagtgcaatgtattttcaaaatgagcatttctgttgcttgctcagctggattggtgcaattctattaaaagatccttttgaaagataaagattttgaacgggttcagagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0247000, RefSeq:Os03g0247000