Os03g0249200

From RiceWiki
Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0249200| Description = Class I peptide chain release factor domain containing protein| Version = NM_001056093.1 GI:115451914 GeneID:4332255|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0249200

Description

Class I peptide chain release factor domain containing protein

Version

NM_001056093.1 GI:115451914 GeneID:4332255

Length

3889 bp

Definition

Oryza sativa Japonica Group Os03g0249200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7925200..7929088

Sequence Coding Region

7925245..7925524,7926887..7926946,7927552..7927634,7927727..7927791,7927858..7927891
,7927995..7928065,7928528..7928618

Expression

GEO Profiles:Os03g0249200

Genome Context

<gbrowseImage1> name=NC_008396:7925200..7929088 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7925200..7929088 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccgccatgcggagcaccaccttcctgcgactcggcttccgccaggtctcctccctcctgttccatggcccctcgtcgcctgcccccaccgtgggtctcgccctcggcgtgggccggggcgcgctggtccgcctccggtgctcggcggctgaggccggcgacgacgggggcaggaaggtgtcggcgcgcctggcgctgacccagcaggtgcttcgcgacgccgaggagcgcgccgcttcggccggctccgaccccgcccccaagatcactttggatcatgttactcttaactttgcaagaagtgggggggctggtggtcagaatgtcaataaagttaacacaaaggtcgacatgcggttcaatgtaaaagaggctcagtggcttggtgagagaatcaaagaacggatattacaaacggaaaagaaccggataaataaagatggggagcttgtgatatcttctacaaaaactaggacacaaaagggaaacattgaagatgctttgcagaaaatacaggcaatcattgatgctgcatcctatgtacctccacccccttcagaagagcaaaagaagaaggttgaaaaaattgctgcagccgctgaaaggaagagacttcagaagaagaaagtgctttcgcagaaaaaggaatttaggaggaacaggactagctgggattga</cdnaseq>

Protein Sequence

<aaseq>MATAMRSTTFLRLGFRQVSSLLFHGPSSPAPTVGLALGVGRGAL VRLRCSAAEAGDDGGRKVSARLALTQQVLRDAEERAASAGSDPAPKITLDHVTLNFAR SGGAGGQNVNKVNTKVDMRFNVKEAQWLGERIKERILQTEKNRINKDGELVISSTKTR TQKGNIEDALQKIQAIIDAASYVPPPPSEEQKKKVEKIAAAAERKRLQKKKVLSQKKE FRRNRTSWD</aaseq>

Gene Sequence

<dnaseqindica>46..325#1688..1747#2353..2435#2528..2592#2659..2692#2796..2866#3329..3419#gtggcccccaatttccgtcgctcggcgtcctccacacgaaggctaatggcgaccgccatgcggagcaccaccttcctgcgactcggcttccgccaggtctcctccctcctgttccatggcccctcgtcgcctgcccccaccgtgggtctcgccctcggcgtgggccggggcgcgctggtccgcctccggtgctcggcggctgaggccggcgacgacgggggcaggaaggtgtcggcgcgcctggcgctgacccagcaggtgcttcgcgacgccgaggagcgcgccgcttcggccggctccgaccccgcccccaagatcactttgggtaataatctgcaactccactattgcccctaatttgtgttacacatatgcttggtaatgatgctcaatcgatgtcctacatatgaagaattgaaacgtcaaatcctaacaaacagctggtgttggtattcatattgtattggtcaaacggaaaattcagtagcttaggctaatatctctactccgaagtactatgtgtaaacggtcgatgagtctgctcggtgagaattggggatctcatatctcatcattatctctgcctagccagtagcccctatcgagttatacttcgtgactcaggtgtatattctacttcctacatccatttcgtgctaaggataattttgacagcttaacggtatatgttggttagaggtgacaatgtggtgaattctagctatgaacaagatttgacttgcattttgttaatcctgtttgttgacagtaaccaatagtttgaaaagcatgctaatagctaaattagcttaagaagcacctaggtttgctgctgtatggctatacatactaagacaaaatctgttagagaacactcaaaatttatgttgtttgttggtagacatcgtaaaaacgtgttatgtccgaacgacactctaatttagtggaggacactttcggttcaattggagattgaaattcctcaaaaagccgagaatgcccctaggatcaaaaccttttgagctaagactggagcgaggatggaatataatgtatgcaagtaatgtacttggggtgatggcaaatttagagttgcataatttctaaatttttactctaacaccatgtttgaagcatgtggtcctaggggcattatcgtctttcttaagaatgtatctatccaattgagccgaaaatgtcctctagaaaattaccagttttttaggatgtttttcatccgtgacacattttttcgatgtctatcagcaaattacacaaatttcgggtgtactgtagcaaaattggcgctactaataataagaaagactctgtacaatactctctatctagcagtagcatgtctctgtaaatttttgaaaggaatatctctataaattgatctaacaggtattggaacatcttgtctaactgttgctatgtgatagtaaaagttgaatgcacattttgttatatgttgatcaagatgtttcaatgtaaatggttttgtacacatctcctcacatagtacattttctattcctgattgacgtgtatttaatgtacatagacttgaaaggatgaaataaagatatgaggaattgataagctgcaagcttattaatagattgtgttaatacttgcattatttgtcaacctgttttgagatctaccctgtttatggttgcagatcatgttactcttaactttgcaagaagtgggggggctggtggtcagaatgtcaataaaggtttcttgctttcacttcctaatctgtttgtttgcgtgaatcattgttttcatacttcctcttttcgtaatactataacattggttttccttttgcacaacatttttttattaatattgggtgtgttcacttgggcagttaggatgaggttttcagtcacgcgtgaaacgagaaagctcatcagcacatgattaattacgtaataactaatataaatttgaaaaaaaaatggatccatttgattttttaaaaaacttttatatagaaatttttgcacaaaactcaccgtttagcagtttgggaaacatatgctaacggaaaaaaaaaagaaggttgctcgttcgatttttctgaaaagaacttagccttacttcagcattgaccaagggattggtctggtatttttaaaatgttcaaaaatttagtagcatattttatttgctactcagcatgattacatgattgttttttggttctaaagcatacaccttgtcttcagaattttcaaataatgaccataatgccctgctatccaatcaatgttccgtgttttcccccatttatgttcgcctctttgttctaaaatacttgatatcgattttcagttaacacaaaggtcgacatgcggttcaatgtaaaagaggctcagtggcttggtgagagaatcaaagaacggatattacaaacggtataaaaaaaatcttcctcttttgcaaatcttcattgtcattttttctgtattgtctcaagaggttgtttatatttgcttggtatacacaggaaaagaaccggataaataaagatggggagcttgtgatatcttctacaaaaactaggacacaaaagtaaatgttactcagttcttttgattgtcttgtttggacagcaactgacacaatttatccttttaggggaaacattgaagatgctttgcagaaaatacaggtatgctttactcatttcagttctttgtcaggaagtaatttgcagaggcttcatgttattgtgctcccctagctttttaactaaacaagtatctccttaacaggcaatcattgatgctgcatcctatgtacctccacccccttcagaagagcaaaagaagaaggttgaaaaaatgtaagctgctattttttcttccatctgctcccttcaatttccgttgttttcagttattttatttctttagaaagtccaatgcagtcatcattacttctgcaatgtgctgatgatgtttgatattttattatccagttgtagattaataatactatttgtgtaattgaatgcaccaagtgtgtatagatctgctttcttaaaaaaatgtaacaagtgtgtgcaagtagctacatacgcttctataaaagataccgcattactctccaaagtgcaaacagttagtagcggttgagattagccaacctttgaacttgtgcaatgttagtttttaggagatcaaagaaacatttttgcatatgcgaactctgaatctttgtagtcatatctctagctcacacttgagaactataaattgtcgaattacactcgtttattcagttgctgctgtgtatttcatttcagtgctgcagccgctgaaaggaagagacttcagaagaagaaagtgctttcgcagaaaaaggaatttaggaggaacaggactagctgggattgactgcaagttattttgcttaaaatcatacctgtatttcgtgcccttttgaggtgatcaagcttcccgcatggtaaacccttattgctttccctgccttaatccccattttttggtcccaaaatgttcctatcactaatatcaatgtgatagtaactcaggttctgacaactagtatttgctccgcgtggttcttgagcgtggagatagggctcacctgatccttgtggcagtaaatatccatgcgcgacaggaacaagttccaaaccggtgaagacgtattggtgaatatggcgagtttcagagccagtttttgctccatcaattggaaggtagcatctgacgggaaaacactgccttttgtcctaaaatgcactgtttgtcagtggtcctgatccctgaacttatcacatgcatcacatgctactgtaacaatcattcacccaattataaagtgtttgcgtgcctgtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0249200, RefSeq:Os03g0249200