Os03g0254400

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0254400| Description = Patatin family protein| Version = NM_001056121.1 GI:115451970 GeneID:4332284| Length = 1495 bp| Definition = Oryza ...")
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Gene Name

Os03g0254400

Description

Patatin family protein

Version

NM_001056121.1 GI:115451970 GeneID:4332284

Length

1495 bp

Definition

Oryza sativa Japonica Group Os03g0254400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8203641..8205135

Sequence Coding Region

8203641..8204753,8204839..8205135

Expression

GEO Profiles:Os03g0254400

Genome Context

<gbrowseImage1> name=NC_008396:8203641..8205135 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8203641..8205135 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggcggaggagatgcaggtggagaggatgcaggaggaggtggagggaggcggcgcggatacggataagctcagctacgagattttctccatcctcgagagcaagttcctgttcgggtacacggacccgcaccagctgtggctgcccaaggcgccggcggcgcaggcgtcggcggcgacggccgtgccgtcggggaaggcggcgcagcgtgggaaggtgtgcgtgctgtgcgtggatggcggcggcggcgggctgcgggcgctgctctccggccgcgcgctggcgcacctggaggccgcgctccggcgcgcgtcgggcgacccggacgcccgcgtcgcggactacttcgacctcgtcgccggtacgggcgccggcggcgtgttcgccgcgatgctgttctcgacgcactcgcgcggcgcgcctctgttccacgccgatgacacatggcgcctcgtggctgaccacgctccccggctcttccgcaaggccgtcggcggctcgacgtcgctcttctgccgacccaagaagcggcccctcgcggcgccgacggcggcgctggacgcggccatgaagacggcgttcggcgaggagctcaccctgcgggataccatcaagcccgtgctcatctcctgctacgacctcaagtcgtccgcgccgctcgtgttctcgcgcgccgacgccctggagagcgagagctacgacttccgcctctgcgaggtcggccgcgcggcgtggtcggaggccggccgattcgagcccgccgaggtcgcgtcggtcgacggcgccacgtcctgcgccgccgtggacggcgggccgatcatgggcagccccgccgccgccgcaatcacgcacgtgcttcacaacaagcacgagttcccgttcgtgcgcggcgtcgaggacctcctcgtgctctccatcgggggatgctccgccggtggcacgggggccgcggccgacgccgacctccgacgcttgcgccgctggggtcccaaggattgggcgcgccccatcgcgcgcatcgccgccgacggcgccgccgacctcgtcgaccacgccgtggcgcgcgccttcgggcagtgccgctcgtccaactacctgcgcattcaggcgaaacgggagagcatgccgccgtgcgggccggacggggagtacgacccaaccccggcgaacgtgcacgcgctgctcgcggcggcggacgagatgctgaagcaccggaacgtggagtcggtgctgttcgaagggaggcgtgtcggcgagcagacgaacgcggagaggctggactgcttcgccgccgagctcgtcgccgagcatcgcagcaggggctcccgtattggccccaccgtggcgttcaagcaggcgccgcggaagcagccgccggcggcggcggtggcggcgatgggctga</cdnaseq>

Protein Sequence

<aaseq>MEEAEEMQVERMQEEVEGGGADTDKLSYEIFSILESKFLFGYTD PHQLWLPKAPAAQASAATAVPSGKAAQRGKVCVLCVDGGGGGLRALLSGRALAHLEAA LRRASGDPDARVADYFDLVAGTGAGGVFAAMLFSTHSRGAPLFHADDTWRLVADHAPR LFRKAVGGSTSLFCRPKKRPLAAPTAALDAAMKTAFGEELTLRDTIKPVLISCYDLKS SAPLVFSRADALESESYDFRLCEVGRAAWSEAGRFEPAEVASVDGATSCAAVDGGPIM GSPAAAAITHVLHNKHEFPFVRGVEDLLVLSIGGCSAGGTGAAADADLRRLRRWGPKD WARPIARIAADGAADLVDHAVARAFGQCRSSNYLRIQAKRESMPPCGPDGEYDPTPAN VHALLAAADEMLKHRNVESVLFEGRRVGEQTNAERLDCFAAELVAEHRSRGSRIGPTV AFKQAPRKQPPAAAVAAMG</aaseq>

Gene Sequence

<dnaseqindica>1..1113#1199..1495#atggaggaggcggaggagatgcaggtggagaggatgcaggaggaggtggagggaggcggcgcggatacggataagctcagctacgagattttctccatcctcgagagcaagttcctgttcgggtacacggacccgcaccagctgtggctgcccaaggcgccggcggcgcaggcgtcggcggcgacggccgtgccgtcggggaaggcggcgcagcgtgggaaggtgtgcgtgctgtgcgtggatggcggcggcggcgggctgcgggcgctgctctccggccgcgcgctggcgcacctggaggccgcgctccggcgcgcgtcgggcgacccggacgcccgcgtcgcggactacttcgacctcgtcgccggtacgggcgccggcggcgtgttcgccgcgatgctgttctcgacgcactcgcgcggcgcgcctctgttccacgccgatgacacatggcgcctcgtggctgaccacgctccccggctcttccgcaaggccgtcggcggctcgacgtcgctcttctgccgacccaagaagcggcccctcgcggcgccgacggcggcgctggacgcggccatgaagacggcgttcggcgaggagctcaccctgcgggataccatcaagcccgtgctcatctcctgctacgacctcaagtcgtccgcgccgctcgtgttctcgcgcgccgacgccctggagagcgagagctacgacttccgcctctgcgaggtcggccgcgcggcgtggtcggaggccggccgattcgagcccgccgaggtcgcgtcggtcgacggcgccacgtcctgcgccgccgtggacggcgggccgatcatgggcagccccgccgccgccgcaatcacgcacgtgcttcacaacaagcacgagttcccgttcgtgcgcggcgtcgaggacctcctcgtgctctccatcgggggatgctccgccggtggcacgggggccgcggccgacgccgacctccgacgcttgcgccgctggggtcccaaggattgggcgcgccccatcgcgcgcatcgccgccgacggcgccgccgacctcgtcgaccacgccgtggcgcgcgccttcgggcagtgccgctcgtccaactacctgcgcattcaggtgagcaaattctcccactgcattgcgcatttcgaacgaacgttccctcggattaaccctggtacaaattctccgccatgatcaggcgaaacgggagagcatgccgccgtgcgggccggacggggagtacgacccaaccccggcgaacgtgcacgcgctgctcgcggcggcggacgagatgctgaagcaccggaacgtggagtcggtgctgttcgaagggaggcgtgtcggcgagcagacgaacgcggagaggctggactgcttcgccgccgagctcgtcgccgagcatcgcagcaggggctcccgtattggccccaccgtggcgttcaagcaggcgccgcggaagcagccgccggcggcggcggtggcggcgatgggctga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0254400, RefSeq:Os03g0254400