Os03g0255000

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0255000| Description = FAR1 domain containing protein| Version = NM_001056125.1 GI:115451978 GeneID:4332288| Length = 3185 bp| Definition ...")
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Gene Name

Os03g0255000

Description

FAR1 domain containing protein

Version

NM_001056125.1 GI:115451978 GeneID:4332288

Length

3185 bp

Definition

Oryza sativa Japonica Group Os03g0255000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8242559..8245743

Sequence Coding Region

8243169..8245583

Expression

GEO Profiles:Os03g0255000

Genome Context

<gbrowseImage1> name=NC_008396:8242559..8245743 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8242559..8245743 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgatcatccgtgacaggcgggcggatgataagtggaaggtggagttcgttgagttggagcataaccatccgtgtacacctgacatggtgaggttcttgaaggcttacagggaaatgcctgactcagctaagaagaaggccaagatttctgatgagatggatgatagggtggagaaatcgctgagcgagattgctgagaccaggaagttcccaactcggcccaagcggagtgttggtggtggagcctctgttggtgggttcaggtttagtagaagcgacagttttgtgcagcggtttggggatgatgaccttattgcactgaagaagtttattgaggcgatgcagcgcaagaagccaaactttatccactactgggatcttgatcaggaaactcatgtgaagaattttttctggactgactcgaggtcccaggcacaataccgttattttggtgacgtcattacacttgacgtgatgtatttacagcattcgcgtgctagccttccattggccacaatccttggggtgaacaaccatggtcaccttgttctgcttggttgtggtctgctttgcagtgacaagaaggaaaactatgtttggctgttgaagaggtggttgggctgtatgaatggcaagccaccagaggcgatcacaaccacctattcagatgccgttgcagaagctgtggctgaggtgttgccaaatgcgaggcaccgtttctgtttttggcatatcttgaaaaaactccaagagaatgtcggacgcacaaatgagaaagaggcaatttccttgagattcaaggaggttgtttatgacacagtcacacttacagactttgagagagagtgggggcccatggttgagcagtacaagctcaaagacaatgactggttctctgctttgtacagctgccggaaacaatgggcacctggttatgtcaaccattcattttgggctggcacttctgctattaggaaggtcgagaaaccagatccatactttgatggcgtggtgacaactaaaactaccctaccagttttccttgagcaatacgagactactctgagagggaagctggaaagggaggcatatgatgatttgcgctcctattactctaggctcacttcgctgtcgggattaccctttgaggaacaactcatggagctctacacagtacctatgttccaagcattccaagacgagatcaaacaattaatacacgtgatttgtaaagaggtagacaggagtggaaattcaattacctacatggctagtgagttgatacagggaaagaaggtcaactatacagttgtctacaacagtgctgacaaggatgtctggtgcatttgtcgctcctttccgtcacgaggcatcctttgcagccatgctctctccgttcttaagcaagagaatgtgttaatgctgccatcaaagtatatcctcaatcgttggagaaaggattttagagtacttcatgcaactgcaagttccagttctatatcatctgatagagatttgagcattttcaatgatctctatgtccgtggccacgagtatttagaagatgtcattgacattggagccagagaacctgagctcaaagagtttgtgttgacagttatgaaggaagcgaaggacaaactagttaggcctgaccatattcatcaagctgatcagcgggttgatgtaaatatgtcagtgactggccaagtgtccgcagatagaggagtagatgtgaacatttcatcaaatagcacatccctgattcagggagacagaagggttgatacaaatgtgacctcaaacaccacagccatggttcatggtcatggggattccatgacatcaaacaccacagctatgattcgtggggatagaagagttgagatgaagatcccaacgccccaccttattcatggagacggaagaattgacatgaacatggcatcccctctcttgatgcagagggacagaagagttgacatgaacatggcctccccacacatgatacagggggacagaagagttgatatgaacttggcatcaccacactttatacaaagcgacagaagggttgatatgaacctggcatcttcgcatctgatacaaggggacagaagagttgatatgaatatgacatcccctcacttgatacaaggtgacaccagagtggatatgaatatggtatctactgctcagaatggaatgcactcttttgatttggtgaatgtgaacctagaaagtggtcctttgccaatggctgcaactgatttcatgcaaatgcatcagcacccacccgtttaccatccaaaacaactcctcaatatgagagatcaggtgatggacacaaataagaggcccaatatggaaacaaacacatactttatgggaggtggaatgcatgtgggatag</cdnaseq>

Protein Sequence

<aaseq>MLIIRDRRADDKWKVEFVELEHNHPCTPDMVRFLKAYREMPDSA KKKAKISDEMDDRVEKSLSEIAETRKFPTRPKRSVGGGASVGGFRFSRSDSFVQRFGD DDLIALKKFIEAMQRKKPNFIHYWDLDQETHVKNFFWTDSRSQAQYRYFGDVITLDVM YLQHSRASLPLATILGVNNHGHLVLLGCGLLCSDKKENYVWLLKRWLGCMNGKPPEAI TTTYSDAVAEAVAEVLPNARHRFCFWHILKKLQENVGRTNEKEAISLRFKEVVYDTVT LTDFEREWGPMVEQYKLKDNDWFSALYSCRKQWAPGYVNHSFWAGTSAIRKVEKPDPY FDGVVTTKTTLPVFLEQYETTLRGKLEREAYDDLRSYYSRLTSLSGLPFEEQLMELYT VPMFQAFQDEIKQLIHVICKEVDRSGNSITYMASELIQGKKVNYTVVYNSADKDVWCI CRSFPSRGILCSHALSVLKQENVLMLPSKYILNRWRKDFRVLHATASSSSISSDRDLS IFNDLYVRGHEYLEDVIDIGAREPELKEFVLTVMKEAKDKLVRPDHIHQADQRVDVNM SVTGQVSADRGVDVNISSNSTSLIQGDRRVDTNVTSNTTAMVHGHGDSMTSNTTAMIR GDRRVEMKIPTPHLIHGDGRIDMNMASPLLMQRDRRVDMNMASPHMIQGDRRVDMNLA SPHFIQSDRRVDMNLASSHLIQGDRRVDMNMTSPHLIQGDTRVDMNMVSTAQNGMHSF DLVNVNLESGPLPMAATDFMQMHQHPPVYHPKQLLNMRDQVMDTNKRPNMETNTYFMG GGMHVG</aaseq>

Gene Sequence

<dnaseqindica>611..3025#gggggagggttcggagaggcctcgctcctcccgcgccgcgcgtgcgcgaaaccctagctttgaggtggaggtggtggtggaggaggaggaggaggatgaggaggaagcggctgtggctgcggctaggcgtgtcaagagggaggtcgcggatgacctgaacggggagcccgcggaggaggaggatgacgacgaggaggaggtggtggtggaggaggacgaggaggtggttgtcgcctccgacgaggagggcggcgacggggaggcggacggcggcggcgaagtggctgtggccttcgagccgcgcacgctggaggaggccctcgttccgcgcgtgggtgcggtgttcgactctgtggacgaggccttctcgctctacaagacctacgcctaccgcacaggcttccacgcggtgcgccggacctgccacaactacgaggggctccgctaccgctctacctttacctgcactcatggtggcaaggcccgggctgacgccagcccgtctgatggctcaggcgcccgctacccactccgcagcagcaagcgtgcggccaacgcccaggagaagagggctcgtcgcggtgcggctgagaagacaggatgcaaggcgatgttgatcatccgtgacaggcgggcggatgataagtggaaggtggagttcgttgagttggagcataaccatccgtgtacacctgacatggtgaggttcttgaaggcttacagggaaatgcctgactcagctaagaagaaggccaagatttctgatgagatggatgatagggtggagaaatcgctgagcgagattgctgagaccaggaagttcccaactcggcccaagcggagtgttggtggtggagcctctgttggtgggttcaggtttagtagaagcgacagttttgtgcagcggtttggggatgatgaccttattgcactgaagaagtttattgaggcgatgcagcgcaagaagccaaactttatccactactgggatcttgatcaggaaactcatgtgaagaattttttctggactgactcgaggtcccaggcacaataccgttattttggtgacgtcattacacttgacgtgatgtatttacagcattcgcgtgctagccttccattggccacaatccttggggtgaacaaccatggtcaccttgttctgcttggttgtggtctgctttgcagtgacaagaaggaaaactatgtttggctgttgaagaggtggttgggctgtatgaatggcaagccaccagaggcgatcacaaccacctattcagatgccgttgcagaagctgtggctgaggtgttgccaaatgcgaggcaccgtttctgtttttggcatatcttgaaaaaactccaagagaatgtcggacgcacaaatgagaaagaggcaatttccttgagattcaaggaggttgtttatgacacagtcacacttacagactttgagagagagtgggggcccatggttgagcagtacaagctcaaagacaatgactggttctctgctttgtacagctgccggaaacaatgggcacctggttatgtcaaccattcattttgggctggcacttctgctattaggaaggtcgagaaaccagatccatactttgatggcgtggtgacaactaaaactaccctaccagttttccttgagcaatacgagactactctgagagggaagctggaaagggaggcatatgatgatttgcgctcctattactctaggctcacttcgctgtcgggattaccctttgaggaacaactcatggagctctacacagtacctatgttccaagcattccaagacgagatcaaacaattaatacacgtgatttgtaaagaggtagacaggagtggaaattcaattacctacatggctagtgagttgatacagggaaagaaggtcaactatacagttgtctacaacagtgctgacaaggatgtctggtgcatttgtcgctcctttccgtcacgaggcatcctttgcagccatgctctctccgttcttaagcaagagaatgtgttaatgctgccatcaaagtatatcctcaatcgttggagaaaggattttagagtacttcatgcaactgcaagttccagttctatatcatctgatagagatttgagcattttcaatgatctctatgtccgtggccacgagtatttagaagatgtcattgacattggagccagagaacctgagctcaaagagtttgtgttgacagttatgaaggaagcgaaggacaaactagttaggcctgaccatattcatcaagctgatcagcgggttgatgtaaatatgtcagtgactggccaagtgtccgcagatagaggagtagatgtgaacatttcatcaaatagcacatccctgattcagggagacagaagggttgatacaaatgtgacctcaaacaccacagccatggttcatggtcatggggattccatgacatcaaacaccacagctatgattcgtggggatagaagagttgagatgaagatcccaacgccccaccttattcatggagacggaagaattgacatgaacatggcatcccctctcttgatgcagagggacagaagagttgacatgaacatggcctccccacacatgatacagggggacagaagagttgatatgaacttggcatcaccacactttatacaaagcgacagaagggttgatatgaacctggcatcttcgcatctgatacaaggggacagaagagttgatatgaatatgacatcccctcacttgatacaaggtgacaccagagtggatatgaatatggtatctactgctcagaatggaatgcactcttttgatttggtgaatgtgaacctagaaagtggtcctttgccaatggctgcaactgatttcatgcaaatgcatcagcacccacccgtttaccatccaaaacaactcctcaatatgagagatcaggtgatggacacaaataagaggcccaatatggaaacaaacacatactttatgggaggtggaatgcatgtgggatagtttcttgtctagagacccactatgtaatcttttctgtttggaaaggagatgcctttccttattttatattgatatgtatgttcctacagcaggcagcaactaatcaattaggttgtagtaattgcagattaatcttgcagtgctggtagctttgttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0255000, RefSeq:Os03g0255000