Os03g0259400

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0259400| Description = Similar to Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin reductase)| Version = NM_001056147.2 GI:29760068...")
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Gene Name

Os03g0259400

Description

Similar to Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin reductase)

Version

NM_001056147.2 GI:297600681 GeneID:4332311

Length

1444 bp

Definition

Oryza sativa Japonica Group Os03g0259400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8457516..8458959

Sequence Coding Region

8457516..8457775,8457858..8458061,8458153..8458390,8458499..8458648,8458735..8458959

Expression

GEO Profiles:Os03g0259400

Genome Context

<gbrowseImage1> name=NC_008396:8457516..8458959 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8457516..8458959 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcctgctgctcaggagctgctgctgcaagaagtgccgcagcctcgccgcaccggcgcggccctcatcgtgggcgccaccggctacatcggccgtttcgtcgccgaggcctgcctcgacagcggccgcgacaccttcatcctcgtccgccccgggaacgcctgccccgcgcgcgccgcctccgtcgacgcgctccgccagaaaggcgccgtcgtcatcgagggctgcgtcggggggaaggaggggaggaagtccgtggaggcggcgctccgcgcgcgcggcgtcgaggtggtgatctcggtgatgggcggcgccagcatcctcgaccagctcggcctcatcgaggccatccgagctgcaggcacggtcaaaaggtttctgccgtcggagttcgggcacgacgtggacagggcgcggccggtgggggcggggctgaggttctacgaggagaagcggctggtgcggcgggcggcggaggcgtcgggcgtgccgtacaccttcatctgctgcaactccatcgccggctggccctaccacgacagcacgcacccgtccgagctgccgccgccgctcgaccgcttccagatctacggcgacggcgacgtcagagctttcttcgtggctggaagcgacattggtaagttcaccatcagggctgcctacgacgcccggagcatcaacaagatcgtgcacttccgtcccgcctgcaatctcctcagcacgaacgagatggcgtcgctgtgggagagcaagatcggccggacactgccacgcgtgacgcttaccgaggaggacttgatcgccatggctgcagatgacatcatcccggagagcatagtcgcttcactgacgcatgacatttttataaacggttgccagacacatttctacatagacgggcctagagacattgaaatctcaagcctttaccctgatattcccttcagaacaatagacgaatgcttcgacgactacatacatgtcctcaacctagcagaggaagctaaagaagaggaggagaagaagaacgcgccaacagttgggagattggcaataccacctacttgtgcttag</cdnaseq>

Protein Sequence

<aaseq>MAPAAQELLLQEVPQPRRTGAALIVGATGYIGRFVAEACLDSGR DTFILVRPGNACPARAASVDALRQKGAVVIEGCVGGKEGRKSVEAALRARGVEVVISV MGGASILDQLGLIEAIRAAGTVKRFLPSEFGHDVDRARPVGAGLRFYEEKRLVRRAAE ASGVPYTFICCNSIAGWPYHDSTHPSELPPPLDRFQIYGDGDVRAFFVAGSDIGKFTI RAAYDARSINKIVHFRPACNLLSTNEMASLWESKIGRTLPRVTLTEEDLIAMAADDII PESIVASLTHDIFINGCQTHFYIDGPRDIEISSLYPDIPFRTIDECFDDYIHVLNLAE EAKEEEEKKNAPTVGRLAIPPTCA</aaseq>

Gene Sequence

<dnaseqindica>1185..1444#899..1102#570..807#312..461#1..225#atggcgcctgctgctcaggagctgctgctgcaagaagtgccgcagcctcgccgcaccggcgcggccctcatcgtgggcgccaccggctacatcggccgtttcgtcgccgaggcctgcctcgacagcggccgcgacaccttcatcctcgtccgccccgggaacgcctgccccgcgcgcgccgcctccgtcgacgcgctccgccagaaaggcgccgtcgtcatcgaggtgattagagtttaaaattaaccaacttagttaagcgcgcggaaatgaacacatatttggattcatggcgtgtgtgctcgtgacagggctgcgtcggggggaaggaggggaggaagtccgtggaggcggcgctccgcgcgcgcggcgtcgaggtggtgatctcggtgatgggcggcgccagcatcctcgaccagctcggcctcatcgaggccatccgagctgcaggcacggtcaaagtacgtacactacacattttacatacgagcgcgtgcatgcgcgcgtcgcacaactcggatttttggcacgtaaagtttggtctgcgcggtgcgtgtgcgtgggtgcagaggtttctgccgtcggagttcgggcacgacgtggacagggcgcggccggtgggggcggggctgaggttctacgaggagaagcggctggtgcggcgggcggcggaggcgtcgggcgtgccgtacaccttcatctgctgcaactccatcgccggctggccctaccacgacagcacgcacccgtccgagctgccgccgccgctcgaccgcttccagatctacggcgacggcgacgtcagaggtacgtagtacacgctcatgcttgcgccgcatgatgaaattcaccttcgatgcgattttgccaacggtgtgctgcatgcgcgcgcgtgcagctttcttcgtggctggaagcgacattggtaagttcaccatcagggctgcctacgacgcccggagcatcaacaagatcgtgcacttccgtcccgcctgcaatctcctcagcacgaacgagatggcgtcgctgtgggagagcaagatcggccggacactgccacgcgtgacgcttaccgaggaggacttgatcgccatggctgcaggtttggccacctaaaagaatactctcgcgctctaaatggaattttgtcatggtgtatgatctattcatcattttgactgcagatgacatcatcccggagagcatagtcgcttcactgacgcatgacatttttataaacggttgccagacacatttctacatagacgggcctagagacattgaaatctcaagcctttaccctgatattcccttcagaacaatagacgaatgcttcgacgactacatacatgtcctcaacctagcagaggaagctaaagaagaggaggagaagaagaacgcgccaacagttgggagattggcaataccacctacttgtgcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0259400, RefSeq:Os03g0259400