Os03g0259700

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0259700| Description = Protein of unknown function DUF1630 family protein| Version = NM_001056150.2 GI:297600685 GeneID:4332314| Length = 2...")
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Gene Name

Os03g0259700

Description

Protein of unknown function DUF1630 family protein

Version

NM_001056150.2 GI:297600685 GeneID:4332314

Length

2673 bp

Definition

Oryza sativa Japonica Group Os03g0259700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8466408..8469080

Sequence Coding Region

8466486..8466680,8467768..8467960,8468073..8469079

Expression

GEO Profiles:Os03g0259700

Genome Context

<gbrowseImage1> name=NC_008396:8466408..8469080 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8466408..8469080 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttgccgcctggccagcgccggtgccgggccgccccatggagcttccaatcggcagcgcggctctgcgggtgcacctcccgcccgcggccgacgaccctggcccgccgcccgcgctgctgccggcgaacccgtcggtgccgtacggcctcttccacgacgccgacctgtttgcggctttccgcggcctgcttctccacctatggacgctctgggagctcatggtggttggcgagcctgtactggtggttgcaccgtctccacctcaatgctcggaggctgtggctgggcttgttagccttgttgctccgctcttgtacagcgtggatttccggccgtacttcaccatccatgatccagatttcgctcgcctgaatgcgcttgctgaaggcgaggtttttcctccgatggtgcttggtgtgaccaacttgtttttcttgaagagtcttaagagcattcccaatgtcgtgtccgtggggagcccaaacccgaattccactagggtgctcccagtgggtggccagtcccacggatcaggcaatgggatcaatgggacgcctgggaagctcaagcttgacaaactcgcaatcaacaagttttctccgactggcctattgaattccatcaaattaagaagagaaggccctctttgcctcatgacagagcacaaggaggctctatggagcacatatgtgtcaaccacaaagcctgatacttctgttctaaataggcttattgatgcgggcgtatcaccgaggattgaggaatccatgtcggttgtcaacaatgagatattgcggcgacatttcttggagctaacaaccaacttccttgcacctttcgggccatatctgagaaccaccacgccatcagaaggaagctctccttttgtcgatccaccattattgcctccatttcatgcagatgaatttgtcaatggtctggctgctagaggtgcagggaaatttttgtccaaaaggatgaagtccaattggttggacctgtataggagatttttggaaggtcccaactttatgccttggttccggcaaaggcgtgctgcagcagagcaagaacagcagaggctctggaggcaggctcgcatgaatgttgacattgaaaagctaatgtcaaagttgtctgaattggagagaattgattcttttaatgctattgagcggtatcttctacgtgagatggagaattctagaacaggtgctactgaatcagtaacagtgtgtgagaaattgaagggagacctccgagcagcattcagtgtcctcccaaaggacatgcagcaactcctgctctctaaccctaaaagggctttgctgcttcaaggtagcaacgaaaagatcccagggttagatggcattgtctcccagacaagtttgtag</cdnaseq>

Protein Sequence

<aaseq>VAAWPAPVPGRPMELPIGSAALRVHLPPAADDPGPPPALLPANP SVPYGLFHDADLFAAFRGLLLHLWTLWELMVVGEPVLVVAPSPPQCSEAVAGLVSLVA PLLYSVDFRPYFTIHDPDFARLNALAEGEVFPPMVLGVTNLFFLKSLKSIPNVVSVGS PNPNSTRVLPVGGQSHGSGNGINGTPGKLKLDKLAINKFSPTGLLNSIKLRREGPLCL MTEHKEALWSTYVSTTKPDTSVLNRLIDAGVSPRIEESMSVVNNEILRRHFLELTTNF LAPFGPYLRTTTPSEGSSPFVDPPLLPPFHADEFVNGLAARGAGKFLSKRMKSNWLDL YRRFLEGPNFMPWFRQRRAAAEQEQQRLWRQARMNVDIEKLMSKLSELERIDSFNAIE RYLLREMENSRTGATESVTVCEKLKGDLRAAFSVLPKDMQQLLLSNPKRALLLQGSNE KIPGLDGIVSQTSL</aaseq>

Gene Sequence

<dnaseqindica>2401..2595#1121..1313#2..1008#cgttgccgcctggccagcgccggtgccgggccgccccatggagcttccaatcggcagcgcggctctgcgggtgcacctcccgcccgcggccgacgaccctggcccgccgcccgcgctgctgccggcgaacccgtcggtgccgtacggcctcttccacgacgccgacctgtttgcggctttccgcggcctgcttctccacctatggacgctctgggagctcatggtggttggcgagcctgtactggtggttgcaccgtctccacctcaatgctcggaggctgtggctgggcttgttagccttgttgctccgctcttgtacagcgtggatttccggccgtacttcaccatccatgatccagatttcgctcgcctgaatgcgcttgctgaaggcgaggtttttcctccgatggtgcttggtgtgaccaacttgtttttcttgaagagtcttaagagcattcccaatgtcgtgtccgtggggagcccaaacccgaattccactagggtgctcccagtgggtggccagtcccacggatcaggcaatgggatcaatgggacgcctgggaagctcaagcttgacaaactcgcaatcaacaagttttctccgactggcctattgaattccatcaaattaagaagagaaggccctctttgcctcatgacagagcacaaggaggctctatggagcacatatgtgtcaaccacaaagcctgatacttctgttctaaataggcttattgatgcgggcgtatcaccgaggattgaggaatccatgtcggttgtcaacaatgagatattgcggcgacatttcttggagctaacaaccaacttccttgcacctttcgggccatatctgagaaccaccacgccatcagaaggaagctctccttttgtcgatccaccattattgcctccatttcatgcagatgaatttgtcaatggtctggctgctagaggtgcagggaaatttttgtccaaaaggatgaagtccaattggttggacctgtataggtaaaccctaagaatatttatttggtgatacagttttaccttttcattttttgaattgcttggaatgagaggatcaggagctaactttctttattgcgtgtcaccactacaggagatttttggaaggtcccaactttatgccttggttccggcaaaggcgtgctgcagcagagcaagaacagcagaggctctggaggcaggctcgcatgaatgttgacattgaaaagctaatgtcaaagttgtctgaattggagagaattgattcttttaatgctattgagcggtatcttctacgtgagatggaggtaactgtctttctgatgctttcttgaataaagtttaactcgcttatcgtgatttcctttcccatatctaccaagtgttgattgttgaaatttattaacatggtagcccatatttgttcatatctagctatctatgtagcagttacttgcggaaattttagataatccttaactcttgtatgtggctatgacaaaggtaactgcagaaaaaaaaatgtacggcataacttaaaagaaatgtcgaccagcgggggaatgaccacccccacggcttttcattaagaagaagcctcaaccaaactggccgagaaaaaccacgaacctgctgcataacttagtggactatattttctgacagccatcctgctctgaatttgccatctgattaaccgcaggaatattacgtgtgaaaatctgcattacagtgatttacatttagtaacttgaacattacgttttggccaatcagaacctgtgcttggtgcattagacagtttatttgaactaaagatgaattgtaatacaaggcgtttttttagtatgaaacattatactgtatggagtggttgccttgccttgcacaaaattaaggctaaaatgttgacagaattagatgttcagatcatggagtcctggattattagcttgatgttgattccattgggattctgctctgtgtttattttgtgaataaccacctttgttctggcactactgcattatcttgtaatgaagcaatatagtatgagtgaacttatgtactcaatattgatccaatgcaacctccttcagcaatagatcttgtttgccagatgtcttccatctcatcctttgtgtagacaaaagttttactcaccatttaggagtattgctttatttctgcctgctttaccctgtagtagtttgattgctgtagttattttcctgactaagcagagctacaacttggtgggtggaaaattcaccactactagttgaaagaatgattatcttccgcatttatctattctgttagtcagtcattagtgttcttttgcactttatcctttgaagattctgatgttagttttcgatccttgacctgcagaattctagaacaggtgctactgaatcagtaacagtgtgtgagaaattgaagggagacctccgagcagcattcagtgtcctcccaaaggacatgcagcaactcctgctctctaaccctaaaagggctttgctgcttcaaggtagcaacgaaaagatcccagggttagatggcattgtctcccagacaagtttgtagcactttgttttccctgtaaaaatacttttttgtgattcttttgccccacatatagtccaaaatcaactcattttttat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0259700, RefSeq:Os03g0259700