Os03g0261500

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0261500| Description = Heat shock protein DnaJ, N-terminal domain containing protein| Version = NM_001056156.1 GI:115452040 GeneID:4332320| ...")
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Gene Name

Os03g0261500

Description

Heat shock protein DnaJ, N-terminal domain containing protein

Version

NM_001056156.1 GI:115452040 GeneID:4332320

Length

4282 bp

Definition

Oryza sativa Japonica Group Os03g0261500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8552027..8556308

Sequence Coding Region

8552027..8552271,8552793..8552883,8552967..8553027,8553571..8553648,8553784..8553857
,8554582..8554695,8554774..8554881,8555830..8555868,8555939..8556025

Expression

GEO Profiles:Os03g0261500

Genome Context

<gbrowseImage1> name=NC_008396:8552027..8556308 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8552027..8556308 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctctggtatcttccgagcacaagaaatctggaccgtccgttccgtcaccgactcccgtctctcccctctccgtggctctctctctccacgcgacgcgctctctcgtttcgtctcgtcgtcctcccggagcgaccgcctttcgccctccctccatggcgtcgacggatgccgacgaggaccagctcctcaagagcttcctcgccgaggtcagcgaggccgaacgcgacaacgaagtgctcaggattcttggttgcttcaagttaaaccctttcgagcatcttaagttgtcatttgattcatcagcagatgaggtgaagaagcaatataggaagttgtccttgttggttcatcctgataaatgcaagcatccgaaagcacaagaagctttcgcagctctggcaaaagcacagcagctcctacttgatccacaggagagaggatatattcttgatcaagttactgctgcaaaagaagagctgagggcaaagaggaaaaaggagctgaagaaagacagcgcgtcaaagataaagtcccaagtagatgagggaaaatatgaagagcagtatgaacgatcagaagaatttcagaagcagctaataattaaagttcgtgaaattttgacagacaaagagtggcgtcgcaggaaaatgcagatgaggatatcagaggaagaaggaagactgaagaaggatgaagaggaaacaaaagaaatgtggaagaagaagcgggagcatgaagagaagtgggaagagaccagagaccaacgagtctctagctggagggattttatgaagacaggaaagaaggcaaggaaaggtgagatcaaacccccaaagctgaagaccgaggatccgaacaaatcttatgttcagaggccggtgaagcgtgcttaa</cdnaseq>

Protein Sequence

<aaseq>MSLVSSEHKKSGPSVPSPTPVSPLSVALSLHATRSLVSSRRPPG ATAFRPPSMASTDADEDQLLKSFLAEVSEAERDNEVLRILGCFKLNPFEHLKLSFDSS ADEVKKQYRKLSLLVHPDKCKHPKAQEAFAALAKAQQLLLDPQERGYILDQVTAAKEE LRAKRKKELKKDSASKIKSQVDEGKYEEQYERSEEFQKQLIIKVREILTDKEWRRRKM QMRISEEEGRLKKDEEETKEMWKKKREHEEKWEETRDQRVSSWRDFMKTGKKARKGEI KPPKLKTEDPNKSYVQRPVKRA</aaseq>

Gene Sequence

<dnaseqindica>1..245#767..857#941..1001#1545..1622#1758..1831#2556..2669#2748..2855#3804..3842#3913..3999#atgtctctggtatcttccgagcacaagaaatctggaccgtccgttccgtcaccgactcccgtctctcccctctccgtggctctctctctccacgcgacgcgctctctcgtttcgtctcgtcgtcctcccggagcgaccgcctttcgccctccctccatggcgtcgacggatgccgacgaggaccagctcctcaagagcttcctcgccgaggtcagcgaggccgaacgcgacaacgaagtgctcaggtaaatccccccccctctctctctccctccctttcccccctcgtcggccagagcggtttcgatccgtgtccgcatcggcgtagcttcagatccccagccgtgctacactgttcgctccggaattgttcggcgtgtgatgcagcagatgtagaagcagcctcggtgctgaatttccgtgggggttaggggatccagctggttccacttgaaccctaggttagagtcgtacgattggctctcatccataatcagttgtctgcatcctgctctcgaattcagtggctcatggatgtcgattttagctgggatttcatgtttccctttatggaaaccagtatgttgcaaaagaaagaaaaataaacctgcactgtgacgacactacacgctttctgtgttcttgaataccttttcttctcgtggaaattatcagtgcaaaaactaaatgaatttgacataagatttactttatttaaaaaaaaatacatctgcctgcacttcctaacatattcaaaacttatcaggattcttggttgcttcaagttaaaccctttcgagcatcttaagttgtcatttgattcatcagcagatgaggtgaagaagcaatataggaaggtattgagccatttatctgaaaggattcttttcttccaatcctttttttagatctaattgttgtttgttcgtaccatctgtagttgtccttgttggttcatcctgataaatgcaagcatccgaaagcacaagaagctttcgcaggtatgcaatttatccattaacaccagttgcgtagctgtgtagcatgtccaatgataatagtacgtgttatcatacatgtatcgaagaagcattgcactgtattgctataggccagagtttgggttcattttgaaacagcagtcatgggataatttaaccgacaataaacaaagttagctggtaattctacatatcaagattgggagtgtcatcattgcatgtcaaatctaatcactctttgatggaattttttttttgccggaaatgaatacattctttttgttggctttgccagtaactgagaatcaccttggagttagtttttaatattcttataagagatattttttaaaaagaaacaataaaatgcaatgcctacactatctcttactgaggagtttgacttctgtagctagttctaccactaaactcagccacttttttgctcttaaacaactcatatgatttccagtgtcacatcttttttgcttctcacttgctcaatggatgtatatctaattgatggtacctcgtcataaacagctctggcaaaagcacagcagctcctacttgatccacaggagagaggatatattcttgatcaagttactgctgcaaaaggtgcaatgtgattttatttatattgctcttgtattacactattaattcatactatttgagcttcgtaattcgttcaatgaaatataaagggcacggtgcagcaaatttgatgatcttacgtgttaaaaatttcagaagagctgagggcaaagaggaaaaaggagctgaagaaagacagcgcgtcaaagataaagtcccaagtagatgaggtaagacaatctcatgcaaggtggtgtaaactttaatcgtaatttttttggtagtgctgagtaccatatgaatatcaatgtgtaataataatatgctaaacctgaattggtgtaatttggaacaatttttggttttggccaactctgaagtgtaaactatctgaagtttgaaaccccagtctctgcagggatttccttaaccagcagtcagcaatggtcaacctggttggtggctgctgactgcttgttagtgttcccgcggaaggttatttttatgagcttggatgttcatgacttcgttcttacttaatatggataaaaatttctgaaagaaagaagcttctatgcgcactctgacaaaaagatcatttgctgaaattttgacgactttgtagttccatgcttcatgtttgttgaccacattcagtaatagattcttttaggagtcattacatgcttatgattgaactttatagatatataaagaacaaaaacctttcagaaagacaaaatactttatatgtatcatgaaagagccatctgctggaatttcaacagctatgtacgtttggatatcagatgttttcctttgtgcacaacatatgtgtcaatgtgtgattctatgttgccaaaatgacttttgcaagtcacttgtaacatcatattgaacctcattcatgttgaaaaattgagaacgtccactgattggtttgcctatgagtagggaaaatatgaagagcagtatgaacgatcagaagaatttcagaagcagctaataattaaagttcgtgaaattttgacagacaaagagtggcgtcgcaggaaaatgcagatgagggtaaataaagtgctttaaaatttttaaatatcattgattgtgacagtcgatatgagctatgcccatgtgctcctacagatatcagaggaagaaggaagactgaagaaggatgaagaggaaacaaaagaaatgtggaagaagaagcgggagcatgaagagaagtgggaagagaccagagaccaacgagtaagctcgcagttctttgtttaatttgataatcatgttttcacccttatgatatttttgtcatgtgttccacattcataatttagtgcttcagttactttctaatataaaacttgagttccaaaatggaggtttctattctgttccggaatacagaaaatgagtgtgtgaaaaaaaagtcaagttctataaaaagattcaaaatccaatcgagtttcacaaaaaggggaccttagcttatttgattgccttgctatccatgctggctggttgtctactaatctctgcccaaggtcatgctcggcctcacagacagatgtcaatgtgtgtgttggtgcccagtggcaaagccaaaaatccctaggcctgcctctgcccctgttggtgcccttccatctatgtgcttgcctacaaggcccactcacatcagatgattgtctcccgcttgccacacgcagcagctggctgttgcacatgttaggcctgccgtagcaccagttcatcctgctcatctcccaatgccgttcccccactgttgtatattagtgctctgccccttgctgctggtgtaaatccctgctgctgccgcatagtgtggctcaaccatgagatccacttgtaactttaggatgtgttcaaggagttgatcttgtgaactcctattccatctgatacggttcacacaggataccgtggatgtttttttctcagcttaaacgtatgaaagcatgaggctgcatccatgagttgcattagtggtttttatgcatccattatgctaggtttgtagatctgccctaaattccctatcacccaaatccagtacaatgtggtctaatcgtgtctattttacaatgtaagaatgagaccttagatgagtttgtttttctccagatttgattacctgccatgggtactgcctaatatcaatttatttatggcctgtaggtctctagctggagggattttatgaagacaggaaagaaggttagagagtgcacttgagctagtgtatcttgttatgcattaatttgtaacttactgaccccttttataggcaaggaaaggtgagatcaaacccccaaagctgaagaccgaggatccgaacaaatcttatgttcagaggccggtgaagcgtgcttaagaggaatgatgttagtctttgcagccaaagcatatatacagtaaccattcttcttgttacccgatctaagctttatcctatcaaagctcctggcaggctgtaaggttcggttatgccttccgtgttcccactgtagtcagggaacataacacatctttgttagcagaatggcttcatgttctctacatagagttgtattggattaatgtacctcttggatataacacattcctggaaaatgttgaaaaaaatatgtgaaaaagaaactcatcgaattgaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0261500, RefSeq:Os03g0261500