Os03g0262000

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0262000| Description = Similar to AtPIP5K1| Version = NM_001056159.1 GI:115452046 GeneID:4332323| Length = 3814 bp| Definition = Oryza sat...")
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Gene Name

Os03g0262000

Description

Similar to AtPIP5K1

Version

NM_001056159.1 GI:115452046 GeneID:4332323

Length

3814 bp

Definition

Oryza sativa Japonica Group Os03g0262000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8609656..8613469

Sequence Coding Region

8609790..8609866,8610113..8610175,8610276..8610443,8610548..8610713,8611134..8611244
,8611355..8611548,8611642..8611772,8611877..8611976,8612615..8612921

Expression

GEO Profiles:Os03g0262000

Genome Context

<gbrowseImage1> name=NC_008396:8609656..8613469 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8609656..8613469 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgcagcagggggagtgctgccgccacggctggctcggcgtgggggaggccgcggtgggcggcggcggggaggaggccatccgcaaggggcaccggagctacagcctcatgctcaacctgcagcttggcataagctattcggtggggaagtcgtcggcgctgccgttccagaagctcgccgcgtcggacttcgacccgcgggagaaggtatggacacggttcccgccggaggggtccaagttcacgccgccgcatcactcggtggatttccggtggaaggactactgccctgccgtcttcaggcacctgaggaagctgttcggggtggaccctgcggagtacatgctcgccatctgcggcaacgacacgctccgggagctggcgtccccgggcaagagcgggagctgcttcttcatcacgcaggacgatcggttcatgattaaaaccgtgaaaaagtccgaagtgaaggttcttatccggatgttgcggagttactacgaacatgttcgtcagtataagtccactttactaacaaggttttatggcacacattgcattaagcaagctggctgccccaaggtccggttcattataatgggcaatttttgctgttcggaatataagatccataggcgttttgatctgaaaggttcctcacatggtcggactatcgacaaaacagagcgcaagattgatgaaaccactactctcaaggacctcgaccttcagtatgcatttcggttgcagagattttggtacgaggagcttatgaagcaaattcagatggactgcacattcttggagacacagggcattatggactatagcctattgttaggagttcactttcgtaatgattactcagtgtctaaaataggcatatctcagcacatagctttcccaaaatctactggcaaaagaaaatcatttgaaggtggaagcagtttttgtgagctctgctttgtggaatcaggttgcaaagacagagatttgatagactctcggaagccattcatccagttgggaattaacatgcctgcccaggcagagcgcagctcaaaaaaaatattagataattttctcctaaatgaaagacacttgttcataaccccaccaagtggaggatcatgtgatgtctacctcttctttgggataatcgacattcttcaggactatgatataacgaagaaattggaacatgcctacaagtccttccaggtcaaccctgactacatttctgctgtagacccaaagctatactcgagaaggtttcaggatttcatccgcagggtgttcataaaagagcagtaa</cdnaseq>

Protein Sequence

<aaseq>MPPQQGECCRHGWLGVGEAAVGGGGEEAIRKGHRSYSLMLNLQL GISYSVGKSSALPFQKLAASDFDPREKVWTRFPPEGSKFTPPHHSVDFRWKDYCPAVF RHLRKLFGVDPAEYMLAICGNDTLRELASPGKSGSCFFITQDDRFMIKTVKKSEVKVL IRMLRSYYEHVRQYKSTLLTRFYGTHCIKQAGCPKVRFIIMGNFCCSEYKIHRRFDLK GSSHGRTIDKTERKIDETTTLKDLDLQYAFRLQRFWYEELMKQIQMDCTFLETQGIMD YSLLLGVHFRNDYSVSKIGISQHIAFPKSTGKRKSFEGGSSFCELCFVESGCKDRDLI DSRKPFIQLGINMPAQAERSSKKILDNFLLNERHLFITPPSGGSCDVYLFFGIIDILQ DYDITKKLEHAYKSFQVNPDYISAVDPKLYSRRFQDFIRRVFIKEQ</aaseq>

Gene Sequence

<dnaseqindica>135..211#458..520#621..788#893..1058#1479..1589#1700..1893#1987..2117#2222..2321#2960..3266#atctcgtcatcgatgcgctcccctagaatgagagaaacctaggactagtactgcgtcaccatagaaggcgaatcactactctgccccggatcgaccacccacgccgccgtgattgggagaggagacggacgcgcatgccgccgcagcagggggagtgctgccgccacggctggctcggcgtgggggaggccgcggtgggcggcggcggggaggagccgttctacgtgccgctgcgcaagcggctgtcggtggacggcaaggcatccacggcgccgcggatatgcatctgggagtgcgacggcgaggccggggacatcacctgcgacatcgtcgccgcgccgctccgccgcagctgcagcgccaaggcaatgccgccgccggccccgctcttccggatgatgacgccgccgccgccgaggccgcagagaggggacggggaggaggccaggaggcccggggaggccatccgcaaggggcaccggagctacagcctcatgctcaacctgcagcttggcataaggtgataccaattgctccatccctttctgctcctcctcctaattcctcaaacactctgtcccaatgtttggtttggttttgttctccgtgctgagctgcagctattcggtggggaagtcgtcggcgctgccgttccagaagctcgccgcgtcggacttcgacccgcgggagaaggtatggacacggttcccgccggaggggtccaagttcacgccgccgcatcactcggtggatttccggtggaaggactactgccctgccgtcttcaggtgccacattgcgtcctaatccatgaactcggagaggaattcgttgatttcttggcttctagagtgatgtgattgttgggcatactgctgctgagtgatgccaggcacctgaggaagctgttcggggtggaccctgcggagtacatgctcgccatctgcggcaacgacacgctccgggagctggcgtccccgggcaagagcgggagctgcttcttcatcacgcaggacgatcggttcatgattaaaaccgtgaaaaagtccgaagtgaaggtcagttcatgttcatctttgagataactaggcagttgtgggcatcctccaccttgtattgtcgtggacttttaaccggctttgcctttagcttccttactggactagtcacgttttaattgcattcttcagttaactttctactagttatgtacctggaagcatcacatcatggtcatttcaaactgcttaaacgatccttttctatttcattttgcaacagatgtctatttcctataccaagatggttagaattattgcatattttattatccacctaaaggagttattccataatataaattataaatccaggttaatacattatctaaaaaaatatgggtcaataatgtaaaggggcacatactagtatcacatggtgagtagtgttgtcttactcgtaaacatattggtccacaggttcttatccggatgttgcggagttactacgaacatgttcgtcagtataagtccactttactaacaaggttttatggcacacattgcattaagcaagctggctgccccaaggtaagcgacaattacatgtggatacataactcattttaactctgttaactgttgttatgtttgaatgtacattatttcctccctaaacttatgtcagcgtatacaactaggtccggttcattataatgggcaatttttgctgttcggaatataagatccataggcgttttgatctgaaaggttcctcacatggtcggactatcgacaaaacagagcgcaagattgatgaaaccactactctcaaggacctcgaccttcagtatgcatttcggttgcagagattttggtacgaggagcttatgaagtgagtttcctgctatgttaacacaaatatattgtctgcaatttcatttgaattgagatactaattgtaggtctgatccttcatgtcacataggcaaattcagatggactgcacattcttggagacacagggcattatggactatagcctattgttaggagttcactttcgtaatgattactcagtgtctaaaataggcatatctcagcacatagctttcccaagtaagttatagcacgggttgctgttggtgtttacaaaatctggcttatgaacccagctgataattcaccagctttgatctaatcttagctgcatccctgatcagaatctactggcaaaagaaaatcatttgaaggtggaagcagtttttgtgagctctgctttgtggaatcaggttgcaaagacagagatttgatagactctcggtaactcctcacttcttacttttcttgtgaccgtttgcggtctaatgtgtgcattccaggaatagttgaaataccttttaagctgttctgtaataatcaatccaaatcagttacagcttggtagatcaccttaaacagaacaatgtgacatctattgcccttttcaggttctagtaatccttcacatattgtcaaatatattttcaatatatttttaattattaaaagctactctgttcttctggtaacttctgactgtagctcattagttgtttgtatgcatcttgacaattttgtagcataagtggagttatttaatctgtcgttgacaagtagttcatgctcctactttagtttgggacataatgctaatctccaccagtgtaaggtactttttttctgttgcatttttctaaggtaattttgtgttttctcatcatgatacctactttgttgctcccttcgtagacaacaacgaagaagcatcatggggccttgcttgtttgtttaagtgaaatgtttatataaagagagtgaataatatatggaactttagttattgcatctcatgatctgaatatcaaatatagaaactttttatccgttgggctaatgcaacctctgccttctcatatcaggaagccattcatccagttgggaattaacatgcctgcccaggcagagcgcagctcaaaaaaaatattagataattttctcctaaatgaaagacacttgttcataaccccaccaagtggaggatcatgtgatgtctacctcttctttgggataatcgacattcttcaggactatgatataacgaagaaattggaacatgcctacaagtccttccaggtcaaccctgactacatttctgctgtagacccaaagctatactcgagaaggtttcaggatttcatccgcagggtgttcataaaagagcagtaagaaaaagtcattgggttcaatggtaactatcccactgacttcttacatcatgagatccattggtgaagtttaggctatgatcgtattgccaatcccgagcatgcctgaaacagtgaaaaccgcaaatgatggttggttttaccatacgcacagtattctgaataattggggtcaacgagctccgccgacacgcatgctaatatcggatggatgggagctaaaactatgtatagctcggccttttggaagacctgtaaaccgtaagtgtcgaactccatgattgcaaagctagttagttcttccataccactttttttcatttcctttttgtgttctttctttggcatctccccaagaatctgaagtttttatttgcttcttggggtgctgtgctgaatagcatgatcttccaatggagtgacccgatggaaatcagctatttgtacatgtacatatttgtcgtgtatcagacaaattattactatttacaaactggtgcatcctgtcaaaatctaaaaaagaacgaggatgtccatcttgccttcgat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0262000, RefSeq:Os03g0262000