Os03g0274000

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0274000| Description = Oxysterol-binding protein family protein| Version = NM_001056236.1 GI:115452200 GeneID:4332402| Length = 5283 bp| D...")
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Gene Name

Os03g0274000

Description

Oxysterol-binding protein family protein

Version

NM_001056236.1 GI:115452200 GeneID:4332402

Length

5283 bp

Definition

Oryza sativa Japonica Group Os03g0274000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9269482..9274764

Sequence Coding Region

9269772..9269887,9270668..9270761,9272158..9272274,9272744..9272816,9272892..9273010
,9273126..9273247,9273334..9273510,9273746..9273890,9274015..9274193
,9274299..9274548

Expression

GEO Profiles:Os03g0274000

Genome Context

<gbrowseImage1> name=NC_008396:9269482..9274764 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9269482..9274764 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatccaaggacgggagtggagccgcctcgtcgggaggcggcgggggcttcttctcctcgatcgccgccggcgtgcgcagcttgggcaccgccgtccacaaatctgtcaacgggttggtcggctatgaaggacttgaagttattaacccagatggaggcacagaagatgcggaagctgaggctttgagagggcgatggaaacaagaggatcgtgatagttattggaagatgatgcacaagtacataggggcagatgttacatcacttgtgacacttccggtcatcatttttgagccaatgacaatgcttcagaaaatggcagagttgatggaatactgtgaacttttagacaaagcagatgaatgcgaagacccgtacatgcgtatggcatatgcctctgcatgggctgtatcggtctactttgcataccagcgtacctggaagcctttcaatcccatccttggggagacatatgagatggttaaccaccagggtatttcatttattgctgagcaggtaagccatcatcctccgatgggtgccgctcactgtgaaaatgcacattttacatatgacatcacctccaagttgaagaccaaattcttggggaactctctggaagtttatccacttggaaggactagagtgtcacttaagaagtccggtgtcaagctggaattggtaccaccactcacgaaggtcaacaacttgatatttgggcgtacttgggttgattctcctggagagatggtattgacaaacctgacaactggagacaaagttgtgcttttattccagccatgtggctggtttggggctggtcggtacgaggtggatggctatgtgtatagtgcagctgaagaacccaaaataatgataactggaaagtggaaccagtccatgagttgtcagccatgcgatcaagaaggcgatcctcttccaggaactgagctaaaggagatatggagagttgctcctactccaccaaatgacaagtaccagtacacgcacttcgcgcacaaaataaacagcttcgatacggcgccgaagaagctattggcatcggactcccgattgaggcctgatagatatgccctcgagaagggtgacatgtcaaaatcaggttcagaaaagagcaggcttgaagagcaacaaagagctgagaaaagaacacgagaggccaagggggagcaatttactccaagatggtttaacaggaccgatgaaatcgcccctacaccctggggcgagctggaagtgtatgaatacaatggaaaatacaccgagcaccgcgctgccattgacagctcaagtgtggccgacgacgatacagacgtcacttcgatcgaattcaacccgtggcagtacagtagctcatcttcccaatga</cdnaseq>

Protein Sequence

<aaseq>MGSKDGSGAASSGGGGGFFSSIAAGVRSLGTAVHKSVNGLVGYE GLEVINPDGGTEDAEAEALRGRWKQEDRDSYWKMMHKYIGADVTSLVTLPVIIFEPMT MLQKMAELMEYCELLDKADECEDPYMRMAYASAWAVSVYFAYQRTWKPFNPILGETYE MVNHQGISFIAEQVSHHPPMGAAHCENAHFTYDITSKLKTKFLGNSLEVYPLGRTRVS LKKSGVKLELVPPLTKVNNLIFGRTWVDSPGEMVLTNLTTGDKVVLLFQPCGWFGAGR YEVDGYVYSAAEEPKIMITGKWNQSMSCQPCDQEGDPLPGTELKEIWRVAPTPPNDKY QYTHFAHKINSFDTAPKKLLASDSRLRPDRYALEKGDMSKSGSEKSRLEEQQRAEKRT REAKGEQFTPRWFNRTDEIAPTPWGELEVYEYNGKYTEHRAAIDSSSVADDDTDVTSI EFNPWQYSSSSSQ</aaseq>

Gene Sequence

<dnaseqindica>291..406#1187..1280#2677..2793#3263..3335#3411..3529#3645..3766#3853..4029#4265..4409#4534..4712#4818..5067#atccgcgcctcgccttgcttgatttgcctcgcctgccctttttctcgcgcggccgcctccgagatttctcctcctcctcctcctcctcgactcgactcgactcaccccccactgaaatcttcctcccaccaccgcgccgcgacgtcgcacgcccccgcggccgccgccgacgtcgctgtacccccaaaccctagccccgctagcgggagcggtcgagcacacacgcacgcgcgcgcgcgcgcgcggagttctctctctctcctgttgaccacctgcagatcgcccgcgcgatgggatccaaggacgggagtggagccgcctcgtcgggaggcggcgggggcttcttctcctcgatcgccgccggcgtgcgcagcttgggcaccgccgtccacaaatctgtcaacgggtgagtcttccccacccccctcgcgccggtctctcagttgcttgcaaccccgtgccctctcagatcccgacctgagctcccccgatttgttcacccccactttgggctgatcggttttaggattgaggccttctcgccctcgtgatctggcgcttcagcgcctgattcaagctggtgggcgttgatctctgccggcgggggttctagacgagttttgaaccgcgtcgtttcattgaatttcaagctctgggctttactgatcgtagtatgatgtggcgtcagttgattgccaacttataattcttgttactgagttatcttctgtacagactcctaagatatatagtggtatgatctgcgtgttaaatatgccaatccatcagcccttcaggctcatacttagtacgacgaagtgaataattggttataaaagctcagtcatttattttctggatgctgtagtatataccagccgctagcatgaattgtgatttacagtctatttttaactcttcaacctaaataagataagatgtgtgatgtggtctgtacttaattctcatgtcacatttttagttaatgaaacccaccttttacatgcatagcatttggtgcctctttgctttactttattagtatttcttctgttttagtcttgaattcttcttcaacttgcacatttattggatgtgtgctaagctctgttgtcaagggactgtttttagctggaaaaacagtttgtcatgcattttgtaacgagcagttatgtgctgtacataggttggtcggctatgaaggacttgaagttattaacccagatggaggcacagaagatgcggaagctgaggctttgagagggcgatggaaacaagaggtgagaatcactgaaatgtcaacaaaatagtaattttatttcttgaaatacaagcatgttattagactgaccattgtactagtttatgtgtatgtcaattgtgtaattttgaattaactacggtcaacaaatggtaatgtcatgtatggaaagaaaagcatatactttttttatacaagctgtggcatatgtattacagacactattctggatatgtgttcaccaatcaccatcctgcaagtggcagtaaaaaatagttaggatgaaaatgtttgagaacttttcgtagctaagtttcttagcacacccattgcctatattttggagaaattatatataaagtttcaggtttttattggagaaattggctaatggtatttctgtaatctgtacttcttttactcatacaacctgttcttaataacatctaatgttgggggctgctttagtgttatatacttgtctttatgttctcaaaagcctttgtacgacaaatgttggacatgctcgacaaaattgtactatgtttggcattagtggtaagcatttacatgttttaacctttgcacataacaataatttttattaaaaaataaaccttcttttacctcatattagtgaattcttactactcttggtgaggatactcttaagtcttaactagctagattccactgttttgtgcagcacaacactgaaacgcaagctagctttcaacgtttatttactgagtgacagattatttctgttgcattagcttataagtatgttctaatatatgggagtttcaaaacccctaaagcacgcgtaacaaagctgtagttttctcgtctctatttccagatttatcttgtatgtgcccacagctgtcatttgtatatcatgtgcactcttcacaattccttcatgctgcagcagttttacttggattaagatttgggatttcacatgcacactgatgtgattaaatgtctgccaaaaaactgacttgtttagtcgattatatcctgcctgaattattgaacctgctggatacttactgatgtcgtatttataatttttatggttcgttcatgattcatgatccatatagggacgtgttgagattctattttatattgttcaagtagacatgtagtatgtaacatcattattcaaaagttgaaccctagttctacttgtgatgagaaacaggcaatttgcattacttgcagttggcttcatcaaacaataatttttgtgcattttgtgccaaaatgtgtgataaccttcagttgggcttgaattggcatactagatctttctagaggatgattggaacacctttgtatttcagctgcacagtgttctcgtgtatatcccttcatatgctcttgacattccaattaatctgcaggatcgtgatagttattggaagatgatgcacaagtacataggggcagatgttacatcacttgtgacacttccggtcatcatttttgagccaatgacaatgcttcagaaaatggcagaggtttgtactgttaaactcacatttagagcgcagtagcctgtgttcgtcttctcatcctgtgcattggcagaatgttacgttcatttgcttagcgtagtatgttccccaacatattagcatgctgccccttggaaaactattaatctggtgagaactcaaagttgccatatagtctttgtcttgtttcttgggcataaaatctaagctattattattgttcactgaagcatatatgttatatagtcatggactgtaaagcaacaatttcttgttcacaggatacttgttatatctgtatgtcaaaagtcaaataataaaattcaggaacaagatacttttgtgagaatctattgttaattactgttgcaagctataatttggccagtcatccttttgtgcatccatactcttcctgttaaagtcttaatactcgattgctaatgatgttagctgcatgttctgaatgcagttgatggaatactgtgaacttttagacaaagcagatgaatgcgaagacccgtacatgcgtatggcatatgcctgtaagttttgcaccttcccttgtgagcaatgcctttaatatccttgttgtttgatcttttaacttaacttttcagctgcatgggctgtatcggtctactttgcataccagcgtacctggaagcctttcaatcccatccttggggagacatatgagatggttaaccaccagggtatttcatttattgctgagcaggttagtgatatcaccattgcagaaaccttctgcaaacatcttctgccagccaatgatgctggttccacagttctttactgcatgccatcgataatttttcattttattttctcaggtaagccatcatcctccgatgggtgccgctcactgtgaaaatgcacattttacatatgacatcacctccaagttgaagaccaaattcttggggaactctctggaagtttatccacttggaaggtaattttgtcaaactgtgattgtttcaggattatgaataaaccagctctttatatcctaaatggttttttgtttctgcatcacaggactagagtgtcacttaagaagtccggtgtcaagctggaattggtaccaccactcacgaaggtcaacaacttgatatttgggcgtacttgggttgattctcctggagagatggtattgacaaacctgacaactggagacaaagttgtgcttttattccagccatgtggctggtttgggtatgataacactaatcctgactgtctactgcaatcttcagccttgaattaatattgtaattttatgtttccttcgttttagaattacattgaatgttcctgattcctgatttagttgggaaggtggtggtattaattcaaatatatatttttttatctcttgcctttgcctttgtagtgtatccaaagctttaagttcataatgcttaatttctgagtttactcttcattgtagggctggtcggtacgaggtggatggctatgtgtatagtgcagctgaagaacccaaaataatgataactggaaagtggaaccagtccatgagttgtcagccatgcgatcaagaaggcgatcctcttccaggaactgagctaaaggaggtcagaatttcttcggatgtccattattacacagaacatttgttatataaaggcaaagctaattaatacttctataataactgtggatatcttctcaactcttcaacattatactttgtcccagatatggagagttgctcctactccaccaaatgacaagtaccagtacacgcacttcgcgcacaaaataaacagcttcgatacggcgccgaagaagctattggcatcggactcccgattgaggcctgatagatatgccctcgagaagggtgacatgtcaaaatcaggttcagaaaagagcaggtaattgctcattttgtcctaaacctgcgttgttttaggtgtttaatttgaggcatgtggcaaccatccaattatcttgacatttcatttcgtggaaactttcaggcttgaagagcaacaaagagctgagaaaagaacacgagaggccaagggggagcaatttactccaagatggtttaacaggaccgatgaaatcgcccctacaccctggggcgagctggaagtgtatgaatacaatggaaaatacaccgagcaccgcgctgccattgacagctcaagtgtggccgacgacgatacagacgtcacttcgatcgaattcaacccgtggcagtacagtagctcatcttcccaatgattttcgtagggtctgaaactgcacatccgtatttttattatccaatatgcttccaggccttgctttgcacgctgattcatctcagcagagttttcgtgcctttgtagtattatgaccttcactttttcccttcttcatgcttctactgttcaggaagtgatggtgtattcgatgtagtccatatactgtcgttgttaatctagcgaaaattacaac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0274000, RefSeq:Os03g0274000