Os03g0275900

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0275900| Description = Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11)| Version = NM_001056246.1 GI:1...")
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Gene Name

Os03g0275900

Description

Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11)

Version

NM_001056246.1 GI:115452220 GeneID:4332412

Length

5682 bp

Definition

Oryza sativa Japonica Group Os03g0275900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9380070..9385751

Sequence Coding Region

9380196..9380603,9383170..9383286,9383422..9383847,9383936..9385165

Expression

GEO Profiles:Os03g0275900

Genome Context

<gbrowseImage1> name=NC_008396:9380070..9385751 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9380070..9385751 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgaggaagcgaagccgaaccctaacgccgacgcggcgcctgctgcagcggaggcagcagcgtcttctccgccgccgctttcgagctcggagtcggcggaggggaaggataaggaggaggagaaggaggaggaggaggaggaggaggcgggggatttggtggagaagctggtggagttggtggaagagatcgccgccatctcggacttcaggaatgcataccggcggcagttctgcaacctgtcgcggcggatccggctgctcgcgcccatgctggaggaggccaaggaggggccgcggccgctgccggatgtgtcgtattccgctctccggcggctcagggaggcgctcgctgactccagggagctcctccggctcggcgtcagcggtagcaagatctccctggttcttgagagagagaaaataatgaagtctttccaggatattactgcaaggcttgaacaagccttaggtttaatctcatttgatgaacttgacatatcagatgaagtaagagaacaggttgaattggtacatgctcagttcaaaagagctaaagaacgatctgatccatctgatgatgatctctttaatgatttggtgtccgtctacaactcaagcaccagtgctaatgttgacccagatattctccagaggttatctgacaagttgcagcttgccactatatcagacctcaatcaagaatcattgatcttgcacgagatggctagtggcggtgatcctggtgccgttgttgagaagatgtcaatgctgctaaaaagaatcaaggattttgtgcagagtcgagatcctgaaatgggaaccccagtaaatacgacagaactttcgggaaaagacaacatggcatctctgattgttccggatgatttccgttgccccatatcgctggatttaatgaaagatccagttattgttgccactggacagacttatgagcgaggatgcatagagagatggttggaggctgggcatgacacctgtccaaagacacagcagaagcttcccaataaatctctaaccccaaattatgtcttacgcagccttatagctcaatggtgtgaagcaaatggtatggagccaccaaaacgtgctgctcaacatcataatgcaccagcatcatgtaccgctgctgaacatagcaacgtcgttgagcttcttcagaaattattgtcacaaaacctagaagaccagcgtgaggctgcaggtatgcttcgtcagcttgccaagcgcagtcctgaaaatcgtgcttgtataggagatgctggtgctattcctattcttgttagcctgctatctataactgatgttagcactcaagagcatgtagttactgctctcttgaatctttcgatatatgaagagaacaaggcaagaataatcacctctggagctgttcctggagtagttcatgtgttgaagaggggaagcatggaggctcgggagaattcagctgccacactgttcagtctttcactagtagatgagaacaaaataacaattggggcttctggggcaattccagctcttgtgcttctgttgagtaatggaagtcaacggggtaaaagggatgcagctacagccctatttaacctgtgtatctatcagggcaacaagggcaaagctgttagagctggattgatccctgtactattaggactagtcactgagactgaaagtggtatgatggatgaggcccttgctatattggcaattctctcgagccatcctgagggcaagactgcaattagttcagccaacgccattccaatgctagttggagtaatcagaaatggatcagcaaggaacaaggaaaatgctgctgctgttctggtgcatctctgcaatggtgaacagcagcaacagcatcttgctgaagcgcaggagcagggaattgtgaccctgttggaggaactagccaaaagtggcacagacagaggaaagaggaaagcaatccagcttcttgagcgaatgaatcggtttcttatgcagcaaagtcaagcccaagcccaagcagaggccatggcacaagctcatgcgcatgcacagtctcaagctcaggttcaggctcttaacgaagctcaatctcaggtagagatgcaggtggagcaattgttgcttccaactacttcacatctttctgatagacgagacggttga</cdnaseq>

Protein Sequence

<aaseq>MDEEAKPNPNADAAPAAAEAAASSPPPLSSSESAEGKDKEEEKE EEEEEEAGDLVEKLVELVEEIAAISDFRNAYRRQFCNLSRRIRLLAPMLEEAKEGPRP LPDVSYSALRRLREALADSRELLRLGVSGSKISLVLEREKIMKSFQDITARLEQALGL ISFDELDISDEVREQVELVHAQFKRAKERSDPSDDDLFNDLVSVYNSSTSANVDPDIL QRLSDKLQLATISDLNQESLILHEMASGGDPGAVVEKMSMLLKRIKDFVQSRDPEMGT PVNTTELSGKDNMASLIVPDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDT CPKTQQKLPNKSLTPNYVLRSLIAQWCEANGMEPPKRAAQHHNAPASCTAAEHSNVVE LLQKLLSQNLEDQREAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSITDVSTQEHV VTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKITI GASGAIPALVLLLSNGSQRGKRDAATALFNLCIYQGNKGKAVRAGLIPVLLGLVTETE SGMMDEALAILAILSSHPEGKTAISSANAIPMLVGVIRNGSARNKENAAAVLVHLCNG EQQQQHLAEAQEQGIVTLLEELAKSGTDRGKRKAIQLLERMNRFLMQQSQAQAQAEAM AQAHAHAQSQAQVQALNEAQSQVEMQVEQLLLPTTSHLSDRRDG</aaseq>

Gene Sequence

<dnaseqindica>127..534#3101..3217#3353..3778#3867..5096#aatctccaacctcgtctacacttctccaaatccccccacggcgcatcgcccgctcgccctcgccgccaccaccacccgcctccggccaccgcacactagggcggcttgagccccagcgccgccgccatggacgaggaagcgaagccgaaccctaacgccgacgcggcgcctgctgcagcggaggcagcagcgtcttctccgccgccgctttcgagctcggagtcggcggaggggaaggataaggaggaggagaaggaggaggaggaggaggaggaggcgggggatttggtggagaagctggtggagttggtggaagagatcgccgccatctcggacttcaggaatgcataccggcggcagttctgcaacctgtcgcggcggatccggctgctcgcgcccatgctggaggaggccaaggaggggccgcggccgctgccggatgtgtcgtattccgctctccggcggctcagggaggcgctcgctgactccagggagctcctccggctcggcgtcagcggtagcaagatctccctggtgcgtttctcgcttgaggctcgttgttttgttgccatatttggtcgttaaaagattacatttcttctgcttatggcctttcgagtttatttaggatttaataggagaatttgcctcaagaattggagcggattttagtgcgttcatactccaaacttcgtattagcacttccaattgtcccctgtgatatgaccattttagataactctttgacatgatctactgtatctctacatttttaaaatattttgttgtttcttaattgttattttgtggttgtgaagtaagctcaagcttaataatacatgctgaaggttggaccaggttttgttatacctgggtgtcaaatcaatgccgggccagagcagttgatgctgtttagcaacaagcttgtcaaaaacattatctcattatatttttccttttcgctggtgggtcagagtgaaatcggcctcaaccatggtataggaactaattctgtcacataagttgtaacgagcttaatttctgacgcaattttgtgcgcagctagactaaaattcaattgaaactagagatgtatttgataaacagtcttgtttcgatcttttatattattaggagaggtcagtaaggatccactaagtttgtactggacaccaataatttgccacgttaattgcagaaaaagagaaatatctgcaccgttagattgtggttaggtcaagattacaatggggtagatttatcatataattttatacaatgtagagttgcatctatggaaacaaacatgtatatgaaattctgctcttttataatctatagttgcacacaaaattgcacgggaaaatccgctagtgtatacaagtgtattttgtatatatatataatataataaattatttgatgggcaatattttatagcatcatggttggttagttttaaggttccgctcggtgttttaggttctcattgcaaaaacatctctgtgggggattgaaaaattcttttcttttttacttttcagcagatttttgctgcatttgaacgaattttcagtgcatccaaacaagtttccttttttttaccagattcacttcatacaggatctacttgtaaaaatttcgaatcaaaatttcaaagtctggtcctactagggcatttatagtatagaagctcaataaactatatttccctgatttgtaaagaaagctcactgtgaagttactgcacattaaccctggtcccaccagggcatttatagtatataagctcaataaacatcattttttctgacttgtaaagaaaactctgtgaagttactgcacattaaccctggtcccactagggcatatattgagttaccataaatgttaatttccatacctgggttgctctttgcagctgaaaagaaaaactgattgcactcgtgcatttatcttgtaaccttcgtcagaatgatgtgctgtgttccccctcccaggatcgttatcctcgtcccgggaatatggggacaatcttatccctgccttgttaaaacctttcaaaagtagtgtcactcatgaacctgggagctttggtgacatgtaactacaaaggaaaaaagaaatgtaccaagaaaaatgcatttaatatggatctgtagcatcggacttgttcaaaagaatagctctttactttattctgtactgttgctcgtggactaacagttctgttacacaaaacataattgtggttattacaatgaagatgaactattcacagaagtgctttgttctacttgaattaaaaaagaagagaaaaatcacatgctgattacatttgacattcctattaaagttcttacgcagatgattaagtgaagaaattctcttagtaatcgctaatgtagaagttatacgtagaggtctcatcgtctaaatttcttctgggttctcatcaactgttcttcttcttttcctttttggagtgcgagcatcgcctgctgtgtttttttgcccaatgatcggtacattggaacctgctcatgaaaaaaaaaaactgaaatatagtctggtacatgcactgctgaccttggctatcatgggccacaaacacatgtggtaaggatagtgtggttattgcaagctatgagcagcgagagatgcaaatttcacatttcttgggtggatctaaaatggtagtttctggagttccatattgatgttgtaactgatttacatcaacttttttttttcaatatgtcaattgcagatttgtggttgaaaattttacgaattaggggtccctattgtaatgcataactactacaaatattagcttttcaaactaccaaacagtgttttttgcaaaaaatttctatatggaagttgttttaaaaatcatattaatccatttttcaaaaaacaaattagttaatacttaattaatcatgcagtagtacatatttcgttttgcgtgccggggaggaggggttctcctcctcctgaacgcagccttagtaaacaccggacattgaggaatgcaacgtttttagtagacagtcatgtgcatttcctaaccataagggtttgattttgcaggttcttgagagagagaaaataatgaagtctttccaggatattactgcaaggcttgaacaagccttaggtttaatctcatttgatgaacttgacatatcagatgaagtaagagaacaggtaggctaacatattcatgagtattttttttccatttagtaaaagaactattggagtgagatatttttagtattttttttattttgttttgttcaattttgcaaacttgttaacatgtgtgtggctattgtgcaggttgaattggtacatgctcagttcaaaagagctaaagaacgatctgatccatctgatgatgatctctttaatgatttggtgtccgtctacaactcaagcaccagtgctaatgttgacccagatattctccagaggttatctgacaagttgcagcttgccactatatcagacctcaatcaagaatcattgatcttgcacgagatggctagtggcggtgatcctggtgccgttgttgagaagatgtcaatgctgctaaaaagaatcaaggattttgtgcagagtcgagatcctgaaatgggaaccccagtaaatacgacagaactttcgggaaaagacaacatggcatctctgattgttccggatgatttccgttgccccatatcgctggatttaatgaaagatccagttattgttgccactggacaggtagttgattaacctatgtctactttcaatacgcatgcctcccatttgtatttggacttacaataattccttcaatatgcacatgcagacttatgagcgaggatgcatagagagatggttggaggctgggcatgacacctgtccaaagacacagcagaagcttcccaataaatctctaaccccaaattatgtcttacgcagccttatagctcaatggtgtgaagcaaatggtatggagccaccaaaacgtgctgctcaacatcataatgcaccagcatcatgtaccgctgctgaacatagcaacgtcgttgagcttcttcagaaattattgtcacaaaacctagaagaccagcgtgaggctgcaggtatgcttcgtcagcttgccaagcgcagtcctgaaaatcgtgcttgtataggagatgctggtgctattcctattcttgttagcctgctatctataactgatgttagcactcaagagcatgtagttactgctctcttgaatctttcgatatatgaagagaacaaggcaagaataatcacctctggagctgttcctggagtagttcatgtgttgaagaggggaagcatggaggctcgggagaattcagctgccacactgttcagtctttcactagtagatgagaacaaaataacaattggggcttctggggcaattccagctcttgtgcttctgttgagtaatggaagtcaacggggtaaaagggatgcagctacagccctatttaacctgtgtatctatcagggcaacaagggcaaagctgttagagctggattgatccctgtactattaggactagtcactgagactgaaagtggtatgatggatgaggcccttgctatattggcaattctctcgagccatcctgagggcaagactgcaattagttcagccaacgccattccaatgctagttggagtaatcagaaatggatcagcaaggaacaaggaaaatgctgctgctgttctggtgcatctctgcaatggtgaacagcagcaacagcatcttgctgaagcgcaggagcagggaattgtgaccctgttggaggaactagccaaaagtggcacagacagaggaaagaggaaagcaatccagcttcttgagcgaatgaatcggtttcttatgcagcaaagtcaagcccaagcccaagcagaggccatggcacaagctcatgcgcatgcacagtctcaagctcaggttcaggctcttaacgaagctcaatctcaggtagagatgcaggtggagcaattgttgcttccaactacttcacatctttctgatagacgagacggttgataagcaggatgttattcatagttagtgggtttcttttttattcatagtcagcggcttgtttttttggctgaggctagcagttggaagatcgcctgcaatgcctagcgtggaggtgtgtggtttttgttaagcaattagaatcaggaagtgccattagcgtgattctagggccatgagcttcttgacaattgagttttgaggtcgtggaactgttaacctgtgtgccgtttgtacaatgcacccagtgatgaatgttgggaccctcgagttttagggaggtgccattctacttgtacccggtgcctattacaggactggtctgtggcttccaaggttgataattttacttgcctgactcacagtttcagtgaattgtttgttcactttgttaagccaagatttccctacatagctatccataatctattgcatggctggagcatggagggcttttcatatggaatgctctttcttcagttggtttaagcttcaggtctgatctacatttctcagctatcatgtacaccctctattctcaaatataaatatttctagaagttttagcagaaattaagattaaggtcag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0275900, RefSeq:Os03g0275900