Os03g0281500

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0281500| Description = Similar to Resistance protein candidate (Fragment)| Version = NM_001056278.1 GI:115452284 GeneID:4332446| Length = 2...")
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Gene Name

Os03g0281500

Description

Similar to Resistance protein candidate (Fragment)

Version

NM_001056278.1 GI:115452284 GeneID:4332446

Length

2988 bp

Definition

Oryza sativa Japonica Group Os03g0281500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9683469..9686456

Sequence Coding Region

9683675..9686194

Expression

GEO Profiles:Os03g0281500

Genome Context

<gbrowseImage1> name=NC_008396:9683469..9686456 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9683469..9686456 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaccgttcttgagatgctcgtgcagctcgccgtcgttgtcacggtgctatgcgccgccgtgcgagcgtacaccccggcggacagctacctcttcctctgcggcacgtccgggaacgccaccgtcgatggccggacgttcgtcggggacgctggtctgccggcctcggtgctgatggcgccccagagcaccgaggccaacatgccggcgaaccaggtcactggcgccggcgacgactcgccggcgctgtaccagtcagcgcgcgtgttcacggcgccggccaactacgcgttctccgctaagcctggccgccacttcgtccgcctccgcttcttccccttccggtaccagtcttacgacctcgccgcggacgcggcgttcaatgtgtccgtgcagggcgtggtgttcgtcgacgggtacacgcccaagaacggcacggccgtggtcagggagttctccgtgaacatcaccggtagggcgctggtgatcgcgttcacgccgacgggcaagaaggtggcgttcgtcaacgccatcgaggtggtgtcccatcccgacgagctcatcggcgacaccgcgccgatggtgaatccgcggaaccagtcccagtacaccgggttgacggcgaaggcgctggagacggtgcaccggatcaacatgggagagcccaaggtcacgccgaacaacgacacgctgtggaggacatggctgccggactggaccttcctgcacgagagcagcttcgcggcgcacaatcaagtgtctccggcgatgatcaagtaccaaagtggctacgcgacctcgctgacggcgccctccgcggtgtacaccaccgtgacggagttgaacacgacggcggcgatggtcggcaacacgcaggcgcagctcaacctgacgtggaagttcaacgcaccggccgtctcggactacctcctccggctccacttgtgcgacatcgtcagcaaggcgacgctcggtgtggtgttcaatgtctacgtcggccagtggcgggttctccaagactacgagtcttccggcgacacgttcagccttcttgccacgccgctctataaggacttcgtccttgccgccagtgatgcggcgaagggtacaatcacggtgagcatcgggtcatcgacggcaaccaacgcgttgcccggcggcttcctgaacggcctcgagatcatgagaattgtcgggagcaccggctccatcgacggcgccacgtcgccgcgcggctcaaagatcaagaccgggatcatcgccggatcggccgtgggcggggcggtgttggcgattgctctcgggtgcgtcgccgtcaggatgctgcggaggaagaagaagccggtgaagcagccgtcgaacacctgggtgccgttctcggcgagcgcgctgggcgcccgctctcgcaccagcttcggcaggagcagcatcgtcaacgtcgtcacgctggggcagaacggcgccggcgccggcgccgggtaccgcttcccgttcgcggcgctgcaggaggcgacgggcgggttcgaggaggagatggtgatcggcgtgggcgggttcgggaaggtgtacaggggcacgctccgggacggcacgcaggtggccgtgaagcgcgggaaccggctgtcgcagcaggggctcaacgagttccgcacggagatcgagctgctgtcccagctgcgccaccgccacctcgtctcgctcatcggctactgcgacgagcgcggcgagatgatcctggtgtacgagtacatggcgaagggcacgctccggagccacctgtacggctccgacctgccgccgctgccgtggaagcagaggctggaggcgtgcatcggggccgcgagggggctgcactacctgcacaccggctcggccaaggcgatcatccaccgggacgtcaagtcggccaacatcctcctcgacgacggcttcatggccaaggtcgccgacttcgggctgtccaagaccgggccggagctggacaagacgcacgtcagcaccgccgtcaagggcagcttcgggtacctcgacccggagtacttccggcggcagatgctgacggagaagtccgacgtctactccttcggcgtcgtcctgctcgaggtgctctgcgcccgcgccgtcatcgacccgacgctgccccgggagatggtgaacctggcggagtgggcgacgcggcggctcagggacggcgagctcgaccggatcgtggaccagaaaattgccgggacgatacggccggactcgctcaagaagttcgccgacaccgccgagaagtgcctcgcggagtacggcgtggagcggccgagcatgggggacgtgctctggtgcctcgagtacgcgctgcagctgcaggtggcgtcgccggacagctctgtcacgacgcttcagcgcagctcgtcgatctcaagcgtcgtgacagacgccaccgtgagtgcgaacctgggggacctcgacggcatgtccatgaagagagtattctcaaagatgctcaagagcgaggaagagggcaggtga</cdnaseq>

Protein Sequence

<aaseq>MATVLEMLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVD GRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAK PGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGR ALVIAFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRI NMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVY TTVTELNTTAAMVGNTQAQLNLTWKFNAPAVSDYLLRLHLCDIVSKATLGVVFNVYVG QWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNG LEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIALGCVAVRMLRRKKKPV KQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGG FEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLV SLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTG SAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYF RRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQ KIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQ RSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGR</aaseq>

Gene Sequence

<dnaseqindica>207..2726#aggctcagttctcctgttggtagcagttgccttccctgttcctagcttcacatcgtcgtcgtcaagctgcaggtttctgaacaagagatcgtcacccatgcggccatggtggggcaacctactctgatcagcttggctctggttctattctagcctagagcgcgttgatcaatcgccgatgctctggcggccggagttcttgcgccatggcaaccgttcttgagatgctcgtgcagctcgccgtcgttgtcacggtgctatgcgccgccgtgcgagcgtacaccccggcggacagctacctcttcctctgcggcacgtccgggaacgccaccgtcgatggccggacgttcgtcggggacgctggtctgccggcctcggtgctgatggcgccccagagcaccgaggccaacatgccggcgaaccaggtcactggcgccggcgacgactcgccggcgctgtaccagtcagcgcgcgtgttcacggcgccggccaactacgcgttctccgctaagcctggccgccacttcgtccgcctccgcttcttccccttccggtaccagtcttacgacctcgccgcggacgcggcgttcaatgtgtccgtgcagggcgtggtgttcgtcgacgggtacacgcccaagaacggcacggccgtggtcagggagttctccgtgaacatcaccggtagggcgctggtgatcgcgttcacgccgacgggcaagaaggtggcgttcgtcaacgccatcgaggtggtgtcccatcccgacgagctcatcggcgacaccgcgccgatggtgaatccgcggaaccagtcccagtacaccgggttgacggcgaaggcgctggagacggtgcaccggatcaacatgggagagcccaaggtcacgccgaacaacgacacgctgtggaggacatggctgccggactggaccttcctgcacgagagcagcttcgcggcgcacaatcaagtgtctccggcgatgatcaagtaccaaagtggctacgcgacctcgctgacggcgccctccgcggtgtacaccaccgtgacggagttgaacacgacggcggcgatggtcggcaacacgcaggcgcagctcaacctgacgtggaagttcaacgcaccggccgtctcggactacctcctccggctccacttgtgcgacatcgtcagcaaggcgacgctcggtgtggtgttcaatgtctacgtcggccagtggcgggttctccaagactacgagtcttccggcgacacgttcagccttcttgccacgccgctctataaggacttcgtccttgccgccagtgatgcggcgaagggtacaatcacggtgagcatcgggtcatcgacggcaaccaacgcgttgcccggcggcttcctgaacggcctcgagatcatgagaattgtcgggagcaccggctccatcgacggcgccacgtcgccgcgcggctcaaagatcaagaccgggatcatcgccggatcggccgtgggcggggcggtgttggcgattgctctcgggtgcgtcgccgtcaggatgctgcggaggaagaagaagccggtgaagcagccgtcgaacacctgggtgccgttctcggcgagcgcgctgggcgcccgctctcgcaccagcttcggcaggagcagcatcgtcaacgtcgtcacgctggggcagaacggcgccggcgccggcgccgggtaccgcttcccgttcgcggcgctgcaggaggcgacgggcgggttcgaggaggagatggtgatcggcgtgggcgggttcgggaaggtgtacaggggcacgctccgggacggcacgcaggtggccgtgaagcgcgggaaccggctgtcgcagcaggggctcaacgagttccgcacggagatcgagctgctgtcccagctgcgccaccgccacctcgtctcgctcatcggctactgcgacgagcgcggcgagatgatcctggtgtacgagtacatggcgaagggcacgctccggagccacctgtacggctccgacctgccgccgctgccgtggaagcagaggctggaggcgtgcatcggggccgcgagggggctgcactacctgcacaccggctcggccaaggcgatcatccaccgggacgtcaagtcggccaacatcctcctcgacgacggcttcatggccaaggtcgccgacttcgggctgtccaagaccgggccggagctggacaagacgcacgtcagcaccgccgtcaagggcagcttcgggtacctcgacccggagtacttccggcggcagatgctgacggagaagtccgacgtctactccttcggcgtcgtcctgctcgaggtgctctgcgcccgcgccgtcatcgacccgacgctgccccgggagatggtgaacctggcggagtgggcgacgcggcggctcagggacggcgagctcgaccggatcgtggaccagaaaattgccgggacgatacggccggactcgctcaagaagttcgccgacaccgccgagaagtgcctcgcggagtacggcgtggagcggccgagcatgggggacgtgctctggtgcctcgagtacgcgctgcagctgcaggtggcgtcgccggacagctctgtcacgacgcttcagcgcagctcgtcgatctcaagcgtcgtgacagacgccaccgtgagtgcgaacctgggggacctcgacggcatgtccatgaagagagtattctcaaagatgctcaagagcgaggaagagggcaggtgaaggattgaagcaagaaatgttctagtatactagcatctggtacacaataggattgcgtatatctcaattttgatcttatatgcatgtaaatttcaacaaatgatgtacatttttttttttgcatgtaggagaaagatgcactaaactgcattatggtacagtgataggataccacagttggcaatgtaggagtatatcacgccagtaaacacaatgcaaatgcaaagcaacacaccagtaataacgagtatatattctcacg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0281500, RefSeq:Os03g0281500