Os03g0286800

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0286800| Description = Similar to WD and tetratricopeptide repeats protein 1| Version = NM_001056310.1 GI:115452348 GeneID:4332480| Length ...")
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Gene Name

Os03g0286800

Description

Similar to WD and tetratricopeptide repeats protein 1

Version

NM_001056310.1 GI:115452348 GeneID:4332480

Length

3178 bp

Definition

Oryza sativa Japonica Group Os03g0286800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9944084..9947261

Sequence Coding Region

9944179..9944298,9944910..9945161,9945682..9945825,9945907..9946581,9946674..9946916

Expression

GEO Profiles:Os03g0286800

Genome Context

<gbrowseImage1> name=NC_008396:9944084..9947261 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9944084..9947261 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtcgccagcgaggccgcttgtcgtcgggcggctagctgcttctttgaggtcggcaggcaagagatcggctcctccaccccgcgcgcctcctcgcgccgaatcagcggctccgagggcctagtgatgcggatgcatcagtatggaaagttgcgaggccatgatggttgtgttaatactgtcagcttcaatcctgctggtaacctccttgtgtctggttcggacgacatggacatcatattatgggattggcttgctaaaacacaaaggctcatttacccttctggccatcaagaaaatgttttccatgctcgtgtaatgccatttacagatgatagcgccattgtaactgttgctgctgatggtcaggttagagtgggacaactgaacgagggtggtgaagtcacaaccaaacaaattggggtgcacgatgatcgtgcacataagttggccattgaaccaggaagtccttacatattttacagttgcggggaagatggtttggtacaacattttgacttgcggaatgattcaccaatgaagctcttcagctgctattcattctcaaatagcaggcgtcgtgtaaggcttaataccattgccattgacccttggaaccctaattatctttcaattggtggttctgatgagtatgtgcgggtatatgatttgaggagaatccagttgggtgcttcaaatgacatgaaccaacctgtagataccttctgccctaagcaccttatgggtgggaaggtccacataactggtattgcatactcctacgcaagggagatacttgtctcttacaatgatgaacatatctatttattccaaaacaatatgggtcttggtccaaatcctgaatcagcgcaagcagagttcttggacaggcttgagcagccacaggcatacacaggccacagaaatttccgaactgttaagggagtcagtttttttggaccgaacgatgaatatgtcttgagtggatcggattgtgggaatgtatttgtatggagaaagaagggaggtgaactattgaggatgatgcatggtgacaaaagtgtagttaattgcattgaaccccatccacattttccgttcctagctactagtgggattgacaaaactgtcaagatttggacaccttcagcaaataaagtgatgtcgctgcctaaaaacgcaaagcaaataatagcttccaacaagcgggcgagagaaattgatgcatctcgaccggagctgacgctttcatccgacctcatcatgcatgttttgaggttgcagaggagacagtctgaattgtacagggagcatgaaccagctactgcagatttggcaagtgatgatgatgagtctttcttcgctgggtttgatgatgccaataggaatgtaagatctaactctgatccaagggaatgcattgtgacatga</cdnaseq>

Protein Sequence

<aaseq>MAVASEAACRRAASCFFEVGRQEIGSSTPRASSRRISGSEGLVM RMHQYGKLRGHDGCVNTVSFNPAGNLLVSGSDDMDIILWDWLAKTQRLIYPSGHQENV FHARVMPFTDDSAIVTVAADGQVRVGQLNEGGEVTTKQIGVHDDRAHKLAIEPGSPYI FYSCGEDGLVQHFDLRNDSPMKLFSCYSFSNSRRRVRLNTIAIDPWNPNYLSIGGSDE YVRVYDLRRIQLGASNDMNQPVDTFCPKHLMGGKVHITGIAYSYAREILVSYNDEHIY LFQNNMGLGPNPESAQAEFLDRLEQPQAYTGHRNFRTVKGVSFFGPNDEYVLSGSDCG NVFVWRKKGGELLRMMHGDKSVVNCIEPHPHFPFLATSGIDKTVKIWTPSANKVMSLP KNAKQIIASNKRAREIDASRPELTLSSDLIMHVLRLQRRQSELYREHEPATADLASDD DESFFAGFDDANRNVRSNSDPRECIVT</aaseq>

Gene Sequence

<dnaseqindica>96..215#827..1078#1599..1742#1824..2498#2591..2833#aagctcgacgccggctaaacccgcggaaatccccttccgctttgtctcgtttcctcctcctgccccctcggcactgcaccgccgcagcttccaccatggccgtcgccagcgaggccgcttgtcgtcgggcggctagctgcttctttgaggtcggcaggcaagagatcggctcctccaccccgcgcgcctcctcgcgccgaatcagcggctccgaggtgcccctttctcggtttttaatcccatatgatcctggtgtctgatttcttggaaccttctaggtgttgatcttgtagagttcgcaagtcactaaggaagtaataaggccgcgtatttttgcccgtaagggaggatggatcatgatggccgtattcgtgaatcgtgaagtactatttgatactacttgttcttgttcgtaacagttcagtttgcataggcattatggagttaatgctgtaaaattcatatcttacgactttatgagtccgccgatacgaattgagtactgtcagggtccatggattaggcacacttaaattgataatattgtttggataaattttgattatactaccgtttcatttgtttgtaacttgtagaacattttctggatgtttcattgaagtctgatcatactagtttattgtgattgttattgttgttcaagaatgtgtatatgtatgattggagtacttcctgagataaattactaaagtcatgtgacaacctttctgatttttttttttttgtaattgcttctttctataacaccgaatatctcattgtcatgttggactagttacaattcttctttcctccaattgtttagggcctagtgatgcggatgcatcagtatggaaagttgcgaggccatgatggttgtgttaatactgtcagcttcaatcctgctggtaacctccttgtgtctggttcggacgacatggacatcatattatgggattggcttgctaaaacacaaaggctcatttacccttctggccatcaagaaaatgttttccatgctcgtgtaatgccatttacagatgatagcgccattgtaactgttgctgctgatggtcaggtttgtatctatcaacatctgagttgtgttctaatagtaatactaatttaataccaccatgttattcgcaattattcccataagcatgttgtgcggttacttttgtgttctccacaagtcgtagcaatcagcttcatgttgcatggaacattataataattgtattcgtttactggtacatgcactatttggaaagagacttagatctctgaattgcatgcaattactaagagaaagactaggtttttttttgcgtataacatagtaagtttgcaacaaaaaaaaccatagatatatctaacccttttacttgtagtttattttcttattttgtttgcaatggatgtagttttgaagtaaacctatatctctgtttttacacttgttggttatattggaaatgacttctctaccaatcaactgaaaatattagtagataaagtgataaacacattagcatattttacttttctgttatttgcaatccgatataatttttgataacatgccatatacccaggttagagtgggacaactgaacgagggtggtgaagtcacaaccaaacaaattggggtgcacgatgatcgtgcacataagttggccattgaaccaggaagtccttacatattttacagttgcggggaagatggtttggtacaacatgtatgtcactcaaaacaattttctgcaattgtggcaactgttttgtgatagcatgtacattgaacatttatttctttacagtttgacttgcggaatgattcaccaatgaagctcttcagctgctattcattctcaaatagcaggcgtcgtgtaaggcttaataccattgccattgacccttggaaccctaattatctttcaattggtggttctgatgagtatgtgcgggtatatgatttgaggagaatccagttgggtgcttcaaatgacatgaaccaacctgtagataccttctgccctaagcaccttatgggtgggaaggtccacataactggtattgcatactcctacgcaagggagatacttgtctcttacaatgatgaacatatctatttattccaaaacaatatgggtcttggtccaaatcctgaatcagcgcaagcagagttcttggacaggcttgagcagccacaggcatacacaggccacagaaatttccgaactgttaagggagtcagtttttttggaccgaacgatgaatatgtcttgagtggatcggattgtgggaatgtatttgtatggagaaagaagggaggtgaactattgaggatgatgcatggtgacaaaagtgtagttaattgcattgaaccccatccacattttccgttcctagctactagtgggattgacaaaactgtcaagatttggacaccttcagcaaataaagtgatgtcgctgcctaaaaacgcaaagcaagtaagttgtattgacataagtaatgttggacttgtatttatccatttccttttttttatgttttacgttatttttattttgtcccttaatagataatagcttccaacaagcgggcgagagaaattgatgcatctcgaccggagctgacgctttcatccgacctcatcatgcatgttttgaggttgcagaggagacagtctgaattgtacagggagcatgaaccagctactgcagatttggcaagtgatgatgatgagtctttcttcgctgggtttgatgatgccaataggaatgtaagatctaactctgatccaagggaatgcattgtgacatgaaaggaactgaagatttacagcctgccccttatacttttagcctgcagcctgatgccctgatataccatgctatgctgcatatgcagggcttagcaaacgatgcaacaagaggaacacagatactcatgatacgtgccggcaagattaaacggttaggacttaagagtgtgacgacctaccttgatagtgttgtaaaccaggagtgttactgggtgttttcatctcatgtacttagtctagtattagtaaaaaataatcactttgctggcaaggaaatgcgcatgtaattatggagtactccgtatatttgagaatttctatggcgatgctaagcgtgcaacattc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0286800, RefSeq:Os03g0286800