Os03g0292100

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Revision as of 12:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0292100| Description = Protein phosphatase 2C family protein| Version = NM_001056337.2 GI:297600764 GeneID:4332509| Length = 7224 bp| Defi...")
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Gene Name

Os03g0292100

Description

Protein phosphatase 2C family protein

Version

NM_001056337.2 GI:297600764 GeneID:4332509

Length

7224 bp

Definition

Oryza sativa Japonica Group Os03g0292100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10214215..10221438

Sequence Coding Region

10214215..10214697,10214837..10215184,10215344..10215655,10216875..10216982,10221196..10221438

Expression

GEO Profiles:Os03g0292100

Genome Context

<gbrowseImage1> name=NC_008396:10214215..10221438 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10214215..10221438 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcctgcacggtcgccatcccgagctcgccggtgttctcgccgtcgcgccgcccgctctcctgcaaggccgcgtccgcgtccgcctcgccggagtccgtatccgtcgccgcgtcctcgccggcgcaggccgcgccccccgccgggtcgccgctccgccccttcgcgctgcgcgcccacctgcgcgaggaggccacgccgtcgccccagccgtcggccgccgcggctgcggcggtctccgcccctgcggggtccgtgcttaagaggcggcgcccggcccctctcgtggttccggtgtgcggcggggcggccgctgccgccgccgccgcggcggtggccgcggtggaatcggatccgaggaacgaggtggaggaggacggcgaggagttcgcggtgtactgccggaggggaaaggggaggagaagggtggagatggaggaccggcatgtggccaaggtcgccctcggcggagaccccaaagtggccttttttggtgtattcgatggccacggcgggaagagcgcggcggagttcgtcgccgagaacatgcccaagttcatggccgaggagatgtgcaaggtggacggcggcgacagtggcgagactgaacaggcagtgaagcggtgctacctgaagacggacgaggaattcctcaagagggaggagagcgggggcgcctgctgcgtcaccgctttgctgcagaaaggtggcctcgttgtgtctaatgccggagattgccgtgccgtgctcagccgcgccgggaaggcagaggcgctcacctctgatcaccgggcctcgcgcgaggatgagagggaaagaattgagaatctgggtggattcgtggtgaattaccgaggaacatggcgagttcagggatccttagcagtgtcaagaggcatcggtgatgcacacctcaagcagtgggtggtgtctgatccagacaccacaactctgggtgttgattcgcagtgcgaattcttgattcttgcctctgatggtttgtgggacaaggtggagaaccaggaggcagttgacattgccaggccgctttacatcagcaacgacaaagcttctcgcatgactgcttgcaggaggctcgtcgaaactgcggttactaggggctcgactgacgatatcagcattcgctctggccggcgcatcgcaacgaccgagcagctccagcaagctcgggcatcccatgatggtgagaggaagaagatccaatatgtgtgtgacatatggggcccacttgagatcggagacgagagtgccagtggtggttgggcgagggccagtcgcaacgccgtcaagctcttgctcgtcggccgccgccgagctcatcgagctactcctatacctccgctgctgcctgttgaagcatcgcctccattcgaggctatcatcgggggtggagaagggaggtggagaggcagcgtcgccaagctctcgcccgtggccaccaccaccagccacggtctacagctcttctcatag</cdnaseq>

Protein Sequence

<aaseq>MSCTVAIPSSPVFSPSRRPLSCKAASASASPESVSVAASSPAQA APPAGSPLRPFALRAHLREEATPSPQPSAAAAAAVSAPAGSVLKRRRPAPLVVPVCGG AAAAAAAAAVAAVESDPRNEVEEDGEEFAVYCRRGKGRRRVEMEDRHVAKVALGGDPK VAFFGVFDGHGGKSAAEFVAENMPKFMAEEMCKVDGGDSGETEQAVKRCYLKTDEEFL KREESGGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIEN LGGFVVNYRGTWRVQGSLAVSRGIGDAHLKQWVVSDPDTTTLGVDSQCEFLILASDGL WDKVENQEAVDIARPLYISNDKASRMTACRRLVETAVTRGSTDDISIRSGRRIATTEQ LQQARASHDGERKKIQYVCDIWGPLEIGDESASGGWARASRNAVKLLLVGRRRAHRAT PIPPLLPVEASPPFEAIIGGGEGRWRGSVAKLSPVATTTSHGLQLFS</aaseq>

Gene Sequence

<dnaseqindica>1..483#623..970#1130..1441#2661..2768#6982..7224#atgtcctgcacggtcgccatcccgagctcgccggtgttctcgccgtcgcgccgcccgctctcctgcaaggccgcgtccgcgtccgcctcgccggagtccgtatccgtcgccgcgtcctcgccggcgcaggccgcgccccccgccgggtcgccgctccgccccttcgcgctgcgcgcccacctgcgcgaggaggccacgccgtcgccccagccgtcggccgccgcggctgcggcggtctccgcccctgcggggtccgtgcttaagaggcggcgcccggcccctctcgtggttccggtgtgcggcggggcggccgctgccgccgccgccgcggcggtggccgcggtggaatcggatccgaggaacgaggtggaggaggacggcgaggagttcgcggtgtactgccggaggggaaaggggaggagaagggtggagatggaggaccggcatgtggccaaggtcgccctcggcggagaccccaaagtggtaagctccacacgacttctccgttcgattcgcgtaaaataagttcacacttctcttcgatcaggagagggttttggggagacttcgtagatttcttcttctgtactaaaatttctggaatttattttcgattgtgtaggccttttttggtgtattcgatggccacggcgggaagagcgcggcggagttcgtcgccgagaacatgcccaagttcatggccgaggagatgtgcaaggtggacggcggcgacagtggcgagactgaacaggcagtgaagcggtgctacctgaagacggacgaggaattcctcaagagggaggagagcgggggcgcctgctgcgtcaccgctttgctgcagaaaggtggcctcgttgtgtctaatgccggagattgccgtgccgtgctcagccgcgccgggaaggcagaggcgctcacctctgatcaccgggcctcgcgcgaggatgagagggaaagaattgagaatctggtaagtggtgcctgcacttgccattctcgctttcttgcatcatttcctgcactagctaagtagacctttgatgatgttggcttgttgcagagtgttttaatctgagttctgagctatcatgagttgaagacttatgtgcttttcttctgtcaatttcagggtggattcgtggtgaattaccgaggaacatggcgagttcagggatccttagcagtgtcaagaggcatcggtgatgcacacctcaagcagtgggtggtgtctgatccagacaccacaactctgggtgttgattcgcagtgcgaattcttgattcttgcctctgatggtttgtgggacaaggtggagaaccaggaggcagttgacattgccaggccgctttacatcagcaacgacaaagcttctcgcatgactgcttgcaggaggctcgtcgaaactgcggttactaggggctcgactgacgatatcagcattgtgatcatacagctgcagcaattctcaagataattttaacttgtcgttggagggagagactgaactcacactccagcttattagcacagcggtggtaaaatgtgtggaagagcagggtattcagatagcataattttaacttgttgaagggagactgaactcgctccagcttagcgcactaacagagcggtggtaaagaagtgtggaagaggagggtattcagatagtatgtcacttggcaagcaaaattttaggagcttgcactattttgctggggttccaacattcaattctttttattcatagcaccattctttctgtaaactgattcaattcattctttgattctaatgtaataaggcgagttactactcacctcatactgtaaggctactatttgcctctgtacatggttagttggtatggatagtttctctgagattttaattgattcaatacacagcagcttaagatatcctttaatatttatctgagtcgcactagctttgttaagatgtttctatttcttggcccagtatgggtgtgttgtgttgcttgttgggttggctgaaagcctgtaggcaaaatttgagtctttaaaccgcaaacataatacatagataaacattttactgcaaacaatacaaatataaatattttaccgataaattatttatgattactttgtttatattttgccaaggctgctccaatctgaacaaacacccctagctaagcttaaatgcaaagcatagtatggaaattacttcgcatacgacctcatactatataccctaagggtttttttttttttttacttcgccatggaatctacatcatctctgagcataaaagaatagtttgagatgattggcatacttgctcagtgctctctgatggtgactgaatgaacattgaactaagggtgtctttggttgggattttgaacttgcttttgtttttgcaaaagccaaaagcaaccaaagggctcaaaagccatagctgcttctacccaaaagctgcttttgctctagtacaaattgaaagcacctccaccccctgcttttagctgtttttgggttaagtttttacccacctgatattggttatgatgtataccggttcgttcttttcttccccgtcgcttctcaatgtgtcgttcctcacgcgctgctttgccctagggttggggcatcgccgcccctccgcccgtcgccagcgctctggccggcgcatcgcaacgaccgagcagctccagcaagctcgggcatcccatgatggtgagaggaagaagatccaatatgtgtgtgacatatggggcccacttgtaagcgggactagttgtttcaaacgccacagctgttgaaccaaacgagcttttccaaaggccacaacccatatttcacatctgcttttcgaaaagctacaacccacagctactttttaaaagccacagcccaaccaaacacaccctaagctttgctagaccacttttgttattcaagaagtttgaacttaatatcagattaggaatctacatttgattttgcaagctttagcttcgctgagatcacacaagttctataagaattttttttaaagataatgggaagcttttagccttttattaaacttaatcaattaagtacattaaggtgatagaactgtacttagaatgcacatagcatcaactggaaataattcaattcataaaggaaattgaaaactatctaacctttcctcggtcattgcacgagtgtattcttcacatgctaatgtactgaagtatatggatcacaaggaacaagatgttgagagcatttgatccataatgtatttgcacttatcattatctaaaaaaaaagtttgcacttatatccataggggaaaatgagccatttcccaaccgtagcagaatcttccgctaggacaattgcacttagtacgttgtagagtggatcgaatgatgataatatcatctccttttgaaaccttcaaggcctgtttagttggtgaaataaaaatttttgggtgtcacatcggacgtttgactggatgtcggaaggagttttcggacacgaatgaaaaaactaatttcataactcgcctgtaaaccgcgagacgaatctgttgagcctaattaatccgtcattagcatacgtgggttactgtaacacttatgactaatcatggactaactaggctcaaataattcgtctcgcgatttacatgcaaattgtgtaattagtctttctttttatttatatttaatgctccgtatatatgtctaaagattcgatgtgatgtttttgagaaaagtttttggggaactaaacagcccccaaacataatgacaattttgaaaagaccaggtagtatgacgtttacgtacagctactaccgtctgttctgctccggagactgaatcttcaggcgtgttgcacccggcaggccgtgtgcacatgattggcactgattaaccgaaccagttttctgtttcgacgaggcgatgcatttggacgcgagacgagaaatcaaattatggaagcaatgactgaaacggcaacggccgcgacttccccccatgatccaccgggctaagcaacacccagaattgtttctgcttccaaatgaaatgcgcgttcaattatcaacacaagaaaacagccaatccgcgttgaatgcgatggatttgtatatatcgagtaaacgattctttgtctgaaaatattatcgacaaagcaattactagcttgtgccaattattagtgccgcttttagtttgcaagtcaatcggcatgcgtcatttcgaaagaatgttttatatgactatgattcgtttatttctctctttctttctttttctaaaattttgattcgcacatggccatgtgtgctcggaccgaaaactttcagtcaagttatttttcttttcaagttaaatgttcgtggaggccattagtagctgtaaacacatgcttctgctgtgaacttagtcccgtgtgattgtgtgaaaaggagattaaaacggcgatgcgtgtttctgtcattaacgtgtcgagcttcgtctactttgaccaaagtttcttatcggacattcaagtggtaaagggactggggagagaagaaattggaactcgcaggaaacgcagttggtgaagctctgaagtctgaactgaatacacaaagctgatcttctgaacctgaactaagatctgatatctcaacggtgtctctttctcaatcccaaccctctgaaatcagattgttcagctagttttagaaaatgtgaagaaccaatgccttcgtaaatatgtcacacacctttttcaaaacttttcatacaaatttggctgatctccaaagccttgcacgtcatatgttttcgtgaaaatggttcttcgtgaagaaactgatctccaaagctttgcataaggctgtgtttagttcacaccaaaattaaaagtttgattgaaattggaacgatgtgatggaaaagttgaaagtttatgtgagtaggaaagttttgatgtgatggaaaaattggaagtttgaataattattttggaactaaacacggcttaataccttctctcacacgaaataacaggtatgatgccccaggctgtcgcatggtcacaccatagacatggtgcttactcaataaaaaaaaatcgtagctcatccctcatcctgaaaggattgcaggcatgtaacttcagtgcatgtagaattattatgtttggttctcctaaaaaaagaattgttaagtttgcagaactccaattcaatgcaggatcaaaaattgaagatctttagagttttaccagaagagaggttgaatgtggttagacaaaaatgttagggtgttccagagtataaccaaggtaaaaataactagcgtaaagtgaaaattcaagagcttggaccactctagattcagaacccaggaattttcctccaaattcgaactgggctattagatacagttctttactgtattagaattgcggtcttccctaccggtgcttatgtctctctctactttcctactgcttgtttggattaccacatgaaggactatatataggaagagtatgctatgtactccctctgtcccaaaaacagacaacttctaagaatgaatatggacaagcgtttgtatgggtttatctttagaattttttttatgggacaaagggtttaattgcttttgttatgtagttctttttttttctctatcactttaattttctgccttgatatatactgggcttcgttcccaggatttcaacactcaaaatagagatttgaaaatgattattgcagtataatgtacttcaaaattttgaatatgaaccatattccaactaatttaaaatataccaccctgtaaaaatataatacctcgtagtactccatttgtcaaaaacataagttttcagatttgacacaaatatcaaagaaaatactcattcattctaaaatataaacatttataggttgtttagcagatattatagtttagaagaaatgactttggtgtccctcaatagacgtgtaagggtaggtgagagtaggatgagatgaattttgaatgggaaataattaatgagaaaagtaacatgatttgaatcatagaaattattatattttggaaagaaatgagcatgtgaaactaaatataaaaatattgtcattggttgagtagaggggtaggtgaagaaattaaaaagtggaaggttgtatttggctaagaagaaggaatatagatgaataaattgttatttttaagataaaatttgaatgttatagattgttatattttggtaccggggagtaagaatttgagggcttatttcaaacagtggattttttttaagtcttttgagtgtaaaaaacatatttatttcgcaacataaaaaatggaccgaaatggaatccaacttcacaattcagcccaagggcattttcgcgaggaataagtccactttgtctcccttaactagtgggcgaatatgattcgtatccctgaagaacgataacatatatctcgatccccaaccattagaaccggtatgatttgactccctctgtggttttagaggatagtttcgctaacgtgccgcctacgtaacggtgttgacctagttttcgtccaacgtgacgtttataacattagaattaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgggacctatttatcattaaaaaatattatgggatccactgacatgttgggtccacgatcatcatcacctttccttcttcctcctccctctcacttcctctttctctttctctccctcacttccctctttctctttctctccctcttcgcgcatctgtggggagagctagagcagcagcaacagtggaaaggggcggagtagcggtggtggcgggtgagggttggagcgatggtggcatgtcctgtggttggtgacggtggctgtgaccaaggagatcggagacgagagtgccagtggtggttgggcgagggccagtcgcaacgccgtcaagctcttgctcgtcggccgccgccgagctcatcgagctactcctatacctccgctgctgcctgttgaagcatcgcctccattcgaggctatcatcgggggtggagaagggaggtggagaggcagcgtcgccaagctctcgcccgtggccaccaccaccagccacggtctacagctcttctcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0292100, RefSeq:Os03g0292100