Os03g0298700

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Revision as of 12:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0298700| Description = Conserved hypothetical protein| Version = NM_001056380.2 GI:297600787 GeneID:4332556| Length = 5616 bp| Definition ...")
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Gene Name

Os03g0298700

Description

Conserved hypothetical protein

Version

NM_001056380.2 GI:297600787 GeneID:4332556

Length

5616 bp

Definition

Oryza sativa Japonica Group Os03g0298700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10521830..10527445

Sequence Coding Region

10521830..10521871,10521981..10522088,10522171..10522254,10522342..10523639,10523688..10525381
,10525467..10525534,10525634..10525763,10525869..10525992,10526128..10526288
,10527291..10527445

Expression

GEO Profiles:Os03g0298700

Genome Context

<gbrowseImage1> name=NC_008396:10521830..10527445 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10521830..10527445 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccctgtcgaggcacgaggtcggcaacgagtactcgctcggcggccgcgagctctaccgccgggccaaccagcacgacccggaggccgtcctcgatggcgtcgccatggccggcctcgtcggcgtcctccgccagctcggcgacctcgcagaatttgctgcacaggtgttccatggtctgtacgatgaggtgatgacagcatctgcacgagggcatgggctcatgctccgggtgcagcagctggaggcagagttgccactcgtggagaaagactcttgtcatacagactacctgtatgttgcttctaacaggggaatcgagtggcattcgaatccgaggttggaaagtggggttgtgacaaaaggcgacacgcctcgcttcatcatggactccatcaagaagtgtcatgggcctcccaaattgttcatgcttgacaagtatgacattggtggtgagggagcttgcttgaagagatacacagacccgtccttcttcaagacagattctgcatgttctagcatgctagagcaaggaattcaaagagaaagaagacctcttagagctatggagatcaggccgaccttgcaaaattctgagattttcagaccacctaatgcagccaacaatgactccaaattggagacagatttgtctggtgaagctttggatgaagtcccaacaaggcgccggcaactgaagtaccgacaactaaatggatctgtgttccgaagcttcaggccacagatgcagaatctttacggagaaacttcaccagatgagaagccctgctccatgaaccattcagaagtgcagatatctttcactgactcacctgacacaaacactgaagagagggacatcatggtagacacattcagcagcatggacaaaggcaaggaaaacaactacgtgatggctggcaagaacagattgttatcagaagaagcactatcgcgttcttcggatgctcggtctgcaggaagcagcaagggatacaactctgaagttgacatctacgtggacgctctcaccacaatggattctgaggttgagacagacacagagcacagagatcatggacaccgtgccttggtaccggtggagtccagcaaaccgtgctctgatgttcacggtgccgcggtttcagggtctattagcttcaggaacaatggctcaatggtgcctaactcttcagatgttgtcccagcagaggaagaaaataatgatcaccatcaagggtatgtctgtgtcccttcaccacaggccaaacctgttgctggtgaacatgagaggagcagctcgttggaggaattgtttgcacaagaaaaaccggtgtcatgcgagcatgagaggaccagttctttggaggaattgctccttggagatgtccatccttctgggcataacatgagatcatcagctactgaatcaaatacaaatggtgttgtcagtactgttgaatcaaatggtacagttggcactacaaagaaagaaaaggataaccccatcattgcaggcatttccttcaagaagacagcgagcaagaaatcaaagtatgtgggcagcatggagcttattgtttcaaaagtgggcattttgccgagaaaactctccaaaaagcatgatccgttctctgattccctcagaaacatggccaagcagttgcttgagctgaagattgatggcaccaaagacactgagttatatgaatttgaagcaaatggtgagggatgtgatatgaagtgtctggaaatgtctcaccctcctattgaaattatggggagtgccacgcaaagcgttcctcctgattcacctcaagacaacgttgattcaagagcatgtcgaccagaagaagtgaaccaagagtatgaccatgatgttccaccaagtgatagtccccaagattcagttgatggaaatgtatttcgggacattgcattgttacgttctcaagaggaacaacaatgtgcaggtcctgtaactgttgacaatttgttggatcatgcacccgaaaatactcaagatcagattggggaacatttttatagggaagtgactgaagatattcatactgaagttgtccctgaaaatggccctgatataggcgaagaattagaagaaggcagtattactgaagagaaggtgaacgaggaagatgtcgaggaaagcaatgagtccgatgcatacacattggatgaaaacaccgagtacatagaagagcaagtggtttcagatgatttgatctcctcaccgatctcatccaagcaatctgatgatccttgtcagatggcaccactcactcttacagatgcagatgatgccttggcaggaacaataacagaatccaatgtatctacagtggttgttgaatcagcaacaaccaatgatgtggccgtccaatataatgaacaatgctgtttacatccagaaaccagttttgcacaagatttaactcatgtcagcagctgtgaagttgaaggacaaaatgagccattaccactgtgcagctcatccatggtgggtacaactccagatctgtctgtagacactgaagaaatacatgaaaaccccattttgtgcattgacagcagttctgatttgttcagagatgcactagctccagactctagagatgtgccattaccaaacatctcaagttttgattggatgcttaatggtgcaatgcagaagtcgttgaatgtacttcctgctaaaccacctaatggaattttacaggaaaataattcttccaaagatactgaagatgcaccaccgccactaccacctctcccgccaatgcaatggagaacaacaaaacttcagccagggcctgcagttttatctgcaaaatttgggagaccaccaagaccaaaacctccagttaagtaccaggaaaatgagagttactcctcacaggatgaaagaaatagagagcctgaaattcttcaggaagcaagtctgcagaatggctcgacttcggtcactccagagaaggaaatggtagtggcaaaagtttctaatgagatccagacaaatataatgtttggtagggattctcaagaaagccacctcaaaggactcaatgagtatgatgtgcaagcttctgattcattctccacatcagaattcaagagcgtgggaggtgttgcttcagtagaaggcgacaatcttgaaacttcacagttatctgagcttatagtaattccagaggaggcatggtctgagcttgtagatataaaatcaatatctggacaggagaaaggaggaaaacgccagcttagcactggagttttcaattgcaatggcatgcatactactggtctgtcagcagaaaagagggatgactacaaaatatatgatcaaaatgaaaagaatttattagctggaaagggaaatgcaatagcagattcagaagaaaaggaaccaaatggagttacttgtcaggatgatacgaagaattctgacttgttggtgcaacaggaagatggacaacatgatagttctgctggcacggcaagggaatcgtcttcttcatttgaagaggaagtagcaaagttttcaccaccgagagtgccaacaccacctaaatatcctctattccaagttactgctcatgatagaagcatgctaaaaagggctccaactttggttcagccttctatcaagctttcagacgagaacaacacaatactggaacagataaagaataagtctttcaacttgaagccagttcttgcaaagagaccgaacatgatgggtgctccaagaacgaacttgcaagtggtggccatcctggagagggctaatgctattcgccaggctgttgctgatgacgatgatgaggatagctggagtgactag</cdnaseq>

Protein Sequence

<aaseq>MPLSRHEVGNEYSLGGRELYRRANQHDPEAVLDGVAMAGLVGVL RQLGDLAEFAAQVFHGLYDEVMTASARGHGLMLRVQQLEAELPLVEKDSCHTDYLYVA SNRGIEWHSNPRLESGVVTKGDTPRFIMDSIKKCHGPPKLFMLDKYDIGGEGACLKRY TDPSFFKTDSACSSMLEQGIQRERRPLRAMEIRPTLQNSEIFRPPNAANNDSKLETDL SGEALDEVPTRRRQLKYRQLNGSVFRSFRPQMQNLYGETSPDEKPCSMNHSEVQISFT DSPDTNTEERDIMVDTFSSMDKGKENNYVMAGKNRLLSEEALSRSSDARSAGSSKGYN SEVDIYVDALTTMDSEVETDTEHRDHGHRALVPVESSKPCSDVHGAAVSGSISFRNNG SMVPNSSDVVPAEEENNDHHQGYVCVPSPQAKPVAGEHERSSSLEELFAQEKPVSCEH ERTSSLEELLLGDVHPSGHNMRSSATESNTNGVVSTVESNGTVGTTKKEKDNPIIAGI SFKKTASKKSKYVGSMELIVSKVGILPRKLSKKHDPFSDSLRNMAKQLLELKIDGTKD TELYEFEANGEGCDMKCLEMSHPPIEIMGSATQSVPPDSPQDNVDSRACRPEEVNQEY DHDVPPSDSPQDSVDGNVFRDIALLRSQEEQQCAGPVTVDNLLDHAPENTQDQIGEHF YREVTEDIHTEVVPENGPDIGEELEEGSITEEKVNEEDVEESNESDAYTLDENTEYIE EQVVSDDLISSPISSKQSDDPCQMAPLTLTDADDALAGTITESNVSTVVVESATTNDV AVQYNEQCCLHPETSFAQDLTHVSSCEVEGQNEPLPLCSSSMVGTTPDLSVDTEEIHE NPILCIDSSSDLFRDALAPDSRDVPLPNISSFDWMLNGAMQKSLNVLPAKPPNGILQE NNSSKDTEDAPPPLPPLPPMQWRTTKLQPGPAVLSAKFGRPPRPKPPVKYQENESYSS QDERNREPEILQEASLQNGSTSVTPEKEMVVAKVSNEIQTNIMFGRDSQESHLKGLNE YDVQASDSFSTSEFKSVGGVASVEGDNLETSQLSELIVIPEEAWSELVDIKSISGQEK GGKRQLSTGVFNCNGMHTTGLSAEKRDDYKIYDQNEKNLLAGKGNAIADSEEKEPNGV TCQDDTKNSDLLVQQEDGQHDSSAGTARESSSSFEEEVAKFSPPRVPTPPKYPLFQVT AHDRSMLKRAPTLVQPSIKLSDENNTILEQIKNKSFNLKPVLAKRPNMMGAPRTNLQV VAILERANAIRQAVADDDDEDSWSD</aaseq>

Gene Sequence

<dnaseqindica>5575..5616#5358..5465#5192..5275#3807..5104#2065..3758#1912..1979#1683..1812#1454..1577#1158..1318#1..155#atgcccctgtcgaggcacgaggtcggcaacgagtactcgctcggcggccgcgagctctaccgccgggccaaccagcacgacccggaggccgtcctcgatggcgtcgccatggccggcctcgtcggcgtcctccgccagctcggcgacctcgcagagtacgacgaccctccctccccgtcctcacatgtcttactttgatttatttcgagagagagagagaaaaaaaacgccttcttcgattgctctcccggttgaattcctcatggatggtgagcttttctgattatatttcttgagagcatttttttctgagttattatttggcgaatttcctgggattgttgcgtcgcaatttgctgggggtcaatggtgatgggatgttgatcgcagtagatcacctaatgacctaatgcatttgttatgaacaaacaccggaggccttggtgatcctttttttcttcgaataggtaggtgattgatgtgttagccatttgacttccaggtagttaactctggtaatgtcctagtcctagctcagcaactccaacaaaaaatatcttttttttttctcccccgtcttctgattgtgatcgagcacgtactggtcatcatgtactagcactttatggcccaacttttttttaagaaaaaagtctcaggttcgcgttcatctattgaaggatgctctgattgatttcttagagcctggaggttgaagcaacggaaaacaaagaattgcataaaagcaaccatagtttgacctggattcatccctttagctgttgctgtgattgcgatgataatgatccttggcatttctgttgtttatcaacgttggaatcagttggcagaagtccaaaatgcgcatcaaaattcatcagacgttcttgaattccatttaagccttacaccagatggctgttaggacataggacacatgtgtcgagtactcttcttttcactttatgaacaataatgatttggctatttttggatacaccaactaattaaaagcctcaactgatatattttgctataatcagtaaagattccatgtcaccacacggcaacataactagaacttctggcaatcttagtatcatcatgtcataatgcaaatcatgatgccatcaaattgtcccattgcatgtgtgcagatttgctgcacaggtgttccatggtctgtacgatgaggtgatgacagcatctgcacgagggcatgggctcatgctccgggtgcagcagctggaggcagagttgccactcgtggagaaagactcttgtcatacagactacctgtatgttgcttctaacaggggtatgtgcaacagcacacaacacaagcttctctgcattctgaaagaaacaacttctgtcacctctacctgtttctgctaaggaaagcgtcttctactggtctcgttcataaaaaatcgattggttttttttgcaggaatcgagtggcattcgaatccgaggttggaaagtggggttgtgacaaaaggcgacacgcctcgcttcatcatggactccatcaagaagtgtcatgggcctcccaaattgttcatgcttgacaagtatgatggcctaacctttttctgttcatgtgtgtgttgagcttgcacctactgatgactgaagataatgctgatctttatggatatgatcatgcatttttgcaggtatgacattggtggtgagggagcttgcttgaagagatacacagacccgtccttcttcaagacagattctgcatgttctagcatgctagagcaaggaattcaaagagaaagaagacctcttagagctatggtaatgaaactgaaaacagtagatttcttcggtagaatgatcctatttgactgaacctaatagattgagtgcttgtcatttcttttccatttcttccaggagatcaggccgaccttgcaaaattctgagattttcagaccacctaatgcagccaacaatgactccaagtagcacccactataatcatctcataccacccagaattttctcttctgttttaatctcagacaaacggcaatttcttttttgtagattggagacagatttgtctggtgaagctttggatgaagtcccaacaaggcgccggcaactgaagtaccgacaactaaatggatctgtgttccgaagcttcaggccacagatgcagaatctttacggagaaacttcaccagatgagaagccctgctccatgaaccattcagaagtgcagatatctttcactgactcacctgacacaaacactgaagagagggacatcatggtagacacattcagcagcatggacaaaggcaaggaaaacaactacgtgatggctggcaagaacagattgttatcagaagaagcactatcgcgttcttcggatgctcggtctgcaggaagcagcaagggatacaactctgaagttgacatctacgtggacgctctcaccacaatggattctgaggttgagacagacacagagcacagagatcatggacaccgtgccttggtaccggtggagtccagcaaaccgtgctctgatgttcacggtgccgcggtttcagggtctattagcttcaggaacaatggctcaatggtgcctaactcttcagatgttgtcccagcagaggaagaaaataatgatcaccatcaagggtatgtctgtgtcccttcaccacaggccaaacctgttgctggtgaacatgagaggagcagctcgttggaggaattgtttgcacaagaaaaaccggtgtcatgcgagcatgagaggaccagttctttggaggaattgctccttggagatgtccatccttctgggcataacatgagatcatcagctactgaatcaaatacaaatggtgttgtcagtactgttgaatcaaatggtacagttggcactacaaagaaagaaaaggataaccccatcattgcaggcatttccttcaagaagacagcgagcaagaaatcaaagtatgtgggcagcatggagcttattgtttcaaaagtgggcattttgccgagaaaactctccaaaaagcatgatccgttctctgattccctcagaaacatggccaagcagttgcttgagctgaagattgatggcaccaaagacactgagttatatgaatttgaagcaaatggtgagggatgtgatatgaagtgtctggaaatgtctcaccctcctattgaaattatggggagtgccacgcaaagcgttcctcctgattcacctcaagacaacgttgattcaagagcatgtcgaccagaagaagtgaaccaagagtatgaccatgatgttccaccaagtgatagtccccaagattcagttgatggaaatgtatttcgggacattgcattgttacgttctcaagaggaacaacaatgtgcaggtcctgtaactgttgacaatttgttggatcatgcacccgaaaatactcaagatcagattggggaacatttttatagggaagtgactgaagatattcatactgaagttgtccctgaaaatggccctgatataggcgaagaattagaagaaggcagtattactgaagagaaggtgaacgaggaagatgtcgaggaaagcaatgagtccgatgcatacacattggatgaaaacaccgagtacatagaagagcaagtggtttcagatgatttgatctcctcaccgatctcatccaagcaatctgatgatccttgtcagatggcaccactcactcttacagatgcagatgatgccttggcaggtaaaaatgtagacaatgacatctctgaaatgcatatcacattgtcaggaacaataacagaatccaatgtatctacagtggttgttgaatcagcaacaaccaatgatgtggccgtccaatataatgaacaatgctgtttacatccagaaaccagttttgcacaagatttaactcatgtcagcagctgtgaagttgaaggacaaaatgagccattaccactgtgcagctcatccatggtgggtacaactccagatctgtctgtagacactgaagaaatacatgaaaaccccattttgtgcattgacagcagttctgatttgttcagagatgcactagctccagactctagagatgtgccattaccaaacatctcaagttttgattggatgcttaatggtgcaatgcagaagtcgttgaatgtacttcctgctaaaccacctaatggaattttacaggaaaataattcttccaaagatactgaagatgcaccaccgccactaccacctctcccgccaatgcaatggagaacaacaaaacttcagccagggcctgcagttttatctgcaaaatttgggagaccaccaagaccaaaacctccagttaagtaccaggaaaatgagagttactcctcacaggatgaaagaaatagagagcctgaaattcttcaggaagcaagtctgcagaatggctcgacttcggtcactccagagaaggaaatggtagtggcaaaagtttctaatgagatccagacaaatataatgtttggtagggattctcaagaaagccacctcaaaggactcaatgagtatgatgtgcaagcttctgattcattctccacatcagaattcaagagcgtgggaggtgttgcttcagtagaaggcgacaatcttgaaacttcacagttatctgagcttatagtaattccagaggaggcatggtctgagcttgtagatataaaatcaatatctggacaggagaaaggaggaaaacgccagcttagcactggagttttcaattgcaatggcatgcatactactggtctgtcagcagaaaagagggatgactacaaaatatatgatcaaaatgaaaagaatttattagctggaaagggaaatgcaatagcagattcagaagaaaaggaaccaaatggagttacttgtcaggatgatacgaagaattctgacttgttggtgcaacaggaagatggacaacatgatagttctgctggcacggcaagggaatcgtcttcttcatttgaagaggaagtagcaaagttttcaccaccgagagtgccaacaccacctaaatatcctctattccaagttactgctcatgatagaagcatggtatggttatttttgcattattcgtttcaccactttatgactaagatttcacctgaccaaatgtctatctttctcatgctttattagctaaaaagggctccaactttggttcagccttctatcaagctttcagacgagaacaacacaatactggaacagataaagaataaggtaaagtactcactgttggacctaaaaacattggcattgagtttagttttgctaatgtaattttttcttgtttacttcacagtctttcaacttgaagccagttcttgcaaagagaccgaacatgatgggtgctccaagaacgaacttgcaagtggtggccatcctggagagggctaatgctattcgccaggtttataaaccatctcttgcaacattattaatctcccttacagtttcagctgatcatagctttgtcatctatggtcatatgattattttctctcctgtaaatcaaacaggctgttgctgatgacgatgatgaggatagctggagtgactag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0298700, RefSeq:Os03g0298700