Os03g0299800

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Revision as of 12:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0299800| Description = Protein of unknown function Cys-rich family protein| Version = NM_001056385.1 GI:115452498 GeneID:4332562| Length = ...")
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Gene Name

Os03g0299800

Description

Protein of unknown function Cys-rich family protein

Version

NM_001056385.1 GI:115452498 GeneID:4332562

Length

5327 bp

Definition

Oryza sativa Japonica Group Os03g0299800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10576710..10582036

Sequence Coding Region

10576893..10578704,10581666..10581686

Expression

GEO Profiles:Os03g0299800

Genome Context

<gbrowseImage1> name=NC_008396:10576710..10582036 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10576710..10582036 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtcggcgtggagctcagttgcaggcgctagttcttagcgcgcgcaaaccacatgctgttctgaagtctccaagcgcgcgctgctgtctggaacaagagccgggagcagatatggtcccggacggcggcgaggggcatgagatcgtcgaggtcgccggcgagcccggcgcgccgtcgtcgacaatgcggctgatggacttcatacccatctacatcccgacggtggagacgggcgcgctgagccggagcgtgcgcaagcggcggttcttggacttcctccgcgcccacccgtccagggactggttcctccggtcaaccttcgtcggccgcctccgccaccggggccagggccaggcggcgtcgggggatgacgaggaggtggactccggcggcggtcgccggcggccgcggaggcggttccgcgtgccgttcgtgaggaagatcaagtgggggaagctgtggagctacgcggtgagctggtgcaggaagcccgagaacttcgccatgatcatctggctggcgttcgtcgccgccgggctgctgatgctgttcatgctcatgaccggcatgctcgactccgccatccccgacgacgagcagcggaagaagtggacggaggtgatcaaccagatcctcaacgcgctcttcaccatcatgtgcctgtaccagcaccccaagatcttccaccacctcgtgctgctcctccggtggcgccccggcgccggcgccgaccgcgaggagatccgcaaggtgtactgcaaggacggcgcgccgcggccgcacgaccgcgcgcacatgctcgtcgtggtggtgctgcttcacgccacctgcttggcgcagtacttctgctgcgctctcttctggagctacgcgcgcaaggaacggccggactgggctctcaacatcggctacggccttggcaccggctgccccgtcatcgccggcctctacgcggcgtacggcccgctgggacggaagcagcacgaggattccgacgaggagtcagcggcggcgcaggccggcggcggaaaccggccggcggagaacgaccgtgaggtggagatcaagatatacaaccggcgcgtggtggtgagcagcccggagtggagcggcgggctgttcgactgctgcgacgacgggacggtgtgcgcgctgtcggcgacgtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgtgcacgccttcaccttcatcctgctctgcgtcgcgccgttcctcatcttcagcgtgacggcgctcaacgtccacgacgacgacatccgcgacaccgtcgtctccgtgggcgtgctcctgggcctctgcggcttcctctacggcggcttctggcggacgcagatgcggaagcggtacaagctcccggcctccggctgcgggtgcgggtgcgagtgcggcgccggcggacaggggcacgcgtgccgcgcggcggtgagcgactgcgccaagtggctcttctgctggagctgcgcgctggcgcaggaggtgcggacggccaacttctacgacgtggaggacgaccggttcgtgttccacggcgcccgcaacgaggacgggcgcgccgtgctggtgccgcttccgcgggaggcctccaccgccacggcgcactcgcggagcatgtcgtgcccgcccaagatcgacgccgtggcggcgctgagcggcgcgagcccgctgggcgtgcagatggcagccatcaacatggagaggtcggccacgtacagcggcgagcaccaccccgccgccatgcgtccgcctgtgcccccgctgatgcaaatggaccaggaatag</cdnaseq>

Protein Sequence

<aaseq>MGRRGAQLQALVLSARKPHAVLKSPSARCCLEQEPGADMVPDGG EGHEIVEVAGEPGAPSSTMRLMDFIPIYIPTVETGALSRSVRKRRFLDFLRAHPSRDW FLRSTFVGRLRHRGQGQAASGDDEEVDSGGGRRRPRRRFRVPFVRKIKWGKLWSYAVS WCRKPENFAMIIWLAFVAAGLLMLFMLMTGMLDSAIPDDEQRKKWTEVINQILNALFT IMCLYQHPKIFHHLVLLLRWRPGAGADREEIRKVYCKDGAPRPHDRAHMLVVVVLLHA TCLAQYFCCALFWSYARKERPDWALNIGYGLGTGCPVIAGLYAAYGPLGRKQHEDSDE ESAAAQAGGGNRPAENDREVEIKIYNRRVVVSSPEWSGGLFDCCDDGTVCALSATCTF CVFGWNMERLGFGNMYVHAFTFILLCVAPFLIFSVTALNVHDDDIRDTVVSVGVLLGL CGFLYGGFWRTQMRKRYKLPASGCGCGCECGAGGQGHACRAAVSDCAKWLFCWSCALA QEVRTANFYDVEDDRFVFHGARNEDGRAVLVPLPREASTATAHSRSMSCPPKIDAVAA LSGASPLGVQMAAINMERSATYSGEHHPAAMRPPVPPLMQMDQE</aaseq>

Gene Sequence

<dnaseqindica>3333..5144#351..371#aaaatctaccccacccgccttctctgacttcctgacgagcagcgtcctcttctcctcccagtcccagcttcccctctgaacacgaaaaaaagaagactccttttggtcaataaatcgaaataacctcggaaaaccagggaatttaaccgtgcccacacccatctgttcccttccagcatccacaacctcttcaaccgcttgcctgctcttgtgaggtagctaggcaaagatcaagaggcagtagaggtgtggaggccttggacagttggattcttggagggaaaagaaggaagaacttgcataccagtggaattcttcaggctggtcatggagatgcagctttggaggagatgggtcggcgtggagctcaggtacgtgctatactgctatactatgcgctctgcaatttgttctatcttattcatatctcctttagttctcgaattcgctctcaacctttgtatctcatggattggttactctgttcttgttacgattttctgcatgctagccttttctccatttctactcttttttttctaacggcaatgttaatcgtccccatttgttcttgcgattgatcatcaaaccgatcatcgcctgaacagaagcagcgctttcagtagtacgcgaggcctaggcacggcggtggtttgattttgcaaccactgtactactgctactatcttttagtagataaaaccgtcattttgatttggtaactgaaatctgatcgtaactgtttccaaacgaaacctgtttggaacagcgaccccgttagcacttagcagtgttagatttttcttggcattccgtggagccgtgctgagtgcttccgctgttgggttcagctttcctcttttcctttgacgttcttttctcgctacattttgtttggagtcctacacatcgttggctcagcaccatgttgatagtgacgcccaatgtttgttaaacaaagtaccagtacttgtaaattcagccgcccaccacaggagggaaaaatccttgcatatggtgacatttgctacaagtaacatggctgacaacccaaaccaagttgtgtttagcttttactagttggtagtagtagtctttgtgctttcttctagatggttcagactcttcagagttttttttttctcttttttggaatcataaccaaaagaacatgccttggatgcctcttgaatcttgaattcttgatgagtcgagtaaactagaggctcctatgtttcctgtagcagtagcgtattgttcagaacattactgccactacgcactgtgatctgcccggtttccacgtagtatgtttcgccgtggtcctatgcagaaataaaatccaatttactgaggtgcacccaacacagtaccactaccatctcagcaatcgagaatcgttttgcatcatatccgtttctagattgacccacaatgatttctagtcatggtccttgcatccacattccacaaaggtgttgcagatgaaacatctggttatctcacgatcacagacaaaccgcacaaccctcttcaatacattggagcaatcagtggggtcaacttcttctcttccaattacatggattacacgcacaaaaccgcgtatgcgcccattacgttaaaaaaaacatggaccaacgataaattttatttgaaaatacaccaacgtgtggtaatattcagaaacaccagaatttaaaccctattaagtgaagtcatgcacctatggcttaactatctcaccacatagttttgtgcgatcaacttttggttcctctcgatatttgtcttagagtgaacttaaaaaacaaaactcggtttgtttagcatccaagatacagaactccaaattttacaattcactctattataatttattttaatgaaccccatattttagagcaaaatattttgcaagaccaatacaagcctagatgttacatttaacaaatatatttgtgcataatactcggaaagaataacataagagttatcaatagctctggatgaaatacctagacactataaactaatatttgaaacaccttactggagaaatgcctgaatagaaaacatgttaaaataaagatatatgaatagacacgcgtatgcaaaacatattattaaagaaacgcaggaaactatatgaatgattatttgatggtgtatagaaaaaacatgggaatgttaagtattaaatcaacagtaaataaaattttgagggctaattcgaaatacaggataaaaacacacacatcaatagaggaaatgtaggactatgataggatcaacatggaaacaaaggaattttatagggctggttgtttggaacagagggttgtcttgaacatatgatttagcttctatcctatgctagctagaggttgcggtgaattcatgcgttttcatggtaatgctataatatccctccataattcgtttgagcaattccttctacgtgaacagtggcagatccaaaggatcattaatcccacaaaaatcatgtgaaaacccttcgttccaaaggaccaccagatggttttaatccatacaatctagggtcaagaaaaagtaaaacatatcttccaatcgtgcttcgtttctatcgtacgcatagtaaaaaaaataagtttaaggtggatgttaattttcttagaattctatttaaatcatggtcacaagaaatatttctatgtctttcctatgagtttttaatggttgaactgtactagttcctataggattcctgttcttacttttttcccctccatttttccaatcaatcaaagaagccctaagtaaaaaagagagaatttgtgcctttctggtcatagaattactactccttttagataatcaaatttattacacctagccattaaacaagtaggtcaaccatgtttgaccttgtggcagacgtaagtacgagtagtactccctccacctctaaatatttaacactattaattttttaaaatatgtttgttgttcgtcttattaaaaacttttgtgaaatatgtaaaactatatgtatatataaatactttaacaatgaatcaaatgatagaaaaaaataaaaattacttaaattttttaaataagacgaacagttaaatatattttaaaaaaaagttaacgacgtaaaattttagagacgaagggagtattaattaatcctgtttcaaaagtccgtcaaagcaatggtcagtcagaatagacgagcacagatttggtcattctggttgtgctgcactgtgttgacattttttgcactcttctgacttctctactgacccgaagaaactgccacgtatccaaactctttgcagttgcaggcgctagttcttagcgcgcgcaaaccacatgctgttctgaagtctccaagcgcgcgctgctgtctggaacaagagccgggagcagatatggtcccggacggcggcgaggggcatgagatcgtcgaggtcgccggcgagcccggcgcgccgtcgtcgacaatgcggctgatggacttcatacccatctacatcccgacggtggagacgggcgcgctgagccggagcgtgcgcaagcggcggttcttggacttcctccgcgcccacccgtccagggactggttcctccggtcaaccttcgtcggccgcctccgccaccggggccagggccaggcggcgtcgggggatgacgaggaggtggactccggcggcggtcgccggcggccgcggaggcggttccgcgtgccgttcgtgaggaagatcaagtgggggaagctgtggagctacgcggtgagctggtgcaggaagcccgagaacttcgccatgatcatctggctggcgttcgtcgccgccgggctgctgatgctgttcatgctcatgaccggcatgctcgactccgccatccccgacgacgagcagcggaagaagtggacggaggtgatcaaccagatcctcaacgcgctcttcaccatcatgtgcctgtaccagcaccccaagatcttccaccacctcgtgctgctcctccggtggcgccccggcgccggcgccgaccgcgaggagatccgcaaggtgtactgcaaggacggcgcgccgcggccgcacgaccgcgcgcacatgctcgtcgtggtggtgctgcttcacgccacctgcttggcgcagtacttctgctgcgctctcttctggagctacgcgcgcaaggaacggccggactgggctctcaacatcggctacggccttggcaccggctgccccgtcatcgccggcctctacgcggcgtacggcccgctgggacggaagcagcacgaggattccgacgaggagtcagcggcggcgcaggccggcggcggaaaccggccggcggagaacgaccgtgaggtggagatcaagatatacaaccggcgcgtggtggtgagcagcccggagtggagcggcgggctgttcgactgctgcgacgacgggacggtgtgcgcgctgtcggcgacgtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgtgcacgccttcaccttcatcctgctctgcgtcgcgccgttcctcatcttcagcgtgacggcgctcaacgtccacgacgacgacatccgcgacaccgtcgtctccgtgggcgtgctcctgggcctctgcggcttcctctacggcggcttctggcggacgcagatgcggaagcggtacaagctcccggcctccggctgcgggtgcgggtgcgagtgcggcgccggcggacaggggcacgcgtgccgcgcggcggtgagcgactgcgccaagtggctcttctgctggagctgcgcgctggcgcaggaggtgcggacggccaacttctacgacgtggaggacgaccggttcgtgttccacggcgcccgcaacgaggacgggcgcgccgtgctggtgccgcttccgcgggaggcctccaccgccacggcgcactcgcggagcatgtcgtgcccgcccaagatcgacgccgtggcggcgctgagcggcgcgagcccgctgggcgtgcagatggcagccatcaacatggagaggtcggccacgtacagcggcgagcaccaccccgccgccatgcgtccgcctgtgcccccgctgatgcaaatggaccaggaatagtggcagcggcagcagcacgcgcgccctagctacaccgtggccatgtatacggtagtattaattctatgatacgtacggtagtattaattctatgatacgtataaggtcgtcgtctacacgtactgcaggttgtattagactattagctggtttttatacatacggattcgtttgtttgatagt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0299800, RefSeq:Os03g0299800