Os03g0301400

From RiceWiki
Revision as of 12:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0301400| Description = Exonuclease domain containing protein| Version = NM_001056399.1 GI:115452526 GeneID:4332575| Length = 5366 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0301400

Description

Exonuclease domain containing protein

Version

NM_001056399.1 GI:115452526 GeneID:4332575

Length

5366 bp

Definition

Oryza sativa Japonica Group Os03g0301400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10657553..10662918

Sequence Coding Region

10660907..10661433,10661863..10662068,10662431..10662639

Expression

GEO Profiles:Os03g0301400

Genome Context

<gbrowseImage1> name=NC_008396:10657553..10662918 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10657553..10662918 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctttatattatattttctgtgggaacttccatcaactaaggaattcaataggaagctgttctagtaccggtttgcttaaatgcggattaatctatagaactgtacttcagaacagaggaaataaaactcgaccaatcagtacgacaatactagcaagaagtacaagaaaagaaagtaagcagtcattcaaaaccagccgtcatttgcatagtgaatcggttgagtcatcgattgaagtgctcaaacagtcagatcttgagcatcttaaatcacttcaatgctacaatattccacaaaaggtttccggagtgaagaccgattggcctgcaactatccttgtttttgatattgaaactacaggcttctcacgccgctatgaaagaatcattgagtttgctgttcgggatcttatgggaggaaagaatagcactatccagacactcataaatcctgagagagagataaaaaatgcatatgttcatggtattagcagcagcatggtctgcaaacctgatataccaagatttcgggagtttatccctcttctattacagtatgttttgagtcgtcaaatggctgataaaccagttctgtgggtcgctcataatggacgtagctttgatgtaccatttctcatgtatgaattccaacggagtaaaatagagatgcctggtgactggctatttgtagatacacttccaattgcaaggcaattgattggttctgatggggaaaaactgaaatctgtatctttagacaatctgagggagcactacaagatcccattggcagggagcgctcatcgagcaatgcaggatgtgatcaccctctgctatgttctccagaagttgaccttcgagctgaaactaactgttcctcagctccttgagaggtcattccgggtttccgatctttcaatccctcgccctggaaaatga</cdnaseq>

Protein Sequence

<aaseq>MSLYYIFCGNFHQLRNSIGSCSSTGLLKCGLIYRTVLQNRGNKT RPISTTILARSTRKESKQSFKTSRHLHSESVESSIEVLKQSDLEHLKSLQCYNIPQKV SGVKTDWPATILVFDIETTGFSRRYERIIEFAVRDLMGGKNSTIQTLINPEREIKNAY VHGISSSMVCKPDIPRFREFIPLLLQYVLSRQMADKPVLWVAHNGRSFDVPFLMYEFQ RSKIEMPGDWLFVDTLPIARQLIGSDGEKLKSVSLDNLREHYKIPLAGSAHRAMQDVI TLCYVLQKLTFELKLTVPQLLERSFRVSDLSIPRPGK</aaseq>

Gene Sequence

<dnaseqindica>3355..3881#4311..4516#4879..5087#ctttgccacttgcggcggaagcgccactctctcctctcctctcctccctcccccccacccatcccccgcgccccacgcgcccacgttggcggtgcggttgatccggcaacagcgggcgcctcctcctcctccgcccccaaccaccacccccacccctgcggcgcccatgggtgtccgttcctgagcacaccccacgcttccgctccgcgcatctccgtgggtgggttgggcatataccttgcttcagtcgctttcccatctcttgcttcgtcctgccttcttctttcttccgtgatcccggaacccggtggtcgccgccgcctcggtggatcttgctcggccctgcggggtgctcaggtgcgtcatcccttcgctgccggtgggcattggcttgtgttgctttggttagtctctgttcaggcattccgtcgagcacctgtgctgcgttggggcattggaggccttcttgtttgtttgatctgtaattagctctggtggtgctccttttttttttcgtgcattttgattgttgtgtgtatcttcccttttcctagttttagcggtcctgaaaaattctgggttttttttttctgtgtttctttcagcatgtccccttcatagcaatgtacgctggtcatgatctagatccggggttggctacttgatgtgtgaaccgtgaataagtttggtaatcaagtgttgtgagttgtgatttggaatgggtttgcaatcatcttgtgtgaaccaagcatgttcactactcaaagcagggtgaattttcagcatgatgtttgaatttcatcttatccatgttgcctggttatcgttgtctcgttgatggtattctgtgaattacattaggttgcagaaaatgtttatacacttacctgcctggtgaaattgcctattttgtgtctgcattgtagtgatcgcatttgagaagcttatttgcacaatgtcctacacaaactgtttgaggagatatccagttagagccatctttccatacactaatgccatcctccgagcttctttggagaaaggatctccggaaaagtcactgacagattacaacagtatgcttcgtttcactgctttctgccctgattacagaacatatgtgctccttctcaaggcttgtgcaaaatgttcaaatatctatgctatcatggaaatccattcccatctcgttaaacttggcctgctatctaatcaacgtatagtaactcatctcttcaaattatacattgatcatggtcgcgtgatggaagcttgcaaactattttggctaatgctggagtggagtgccgaacccttttatggaaatttgatgctcatgggattcttgaagtgtggacagatagacaaggcatatcagattttcaagaggatgcctgtcaaggatttggtctcatggaattcaatgattgcaggtacagcaaggaactcgtgcctgaaagatgcaatgaatattttcagcaagttggtcaattcaggtctagtgcctgatggcttctcattctcctcagtcctatcagcttgtgctcaagctggtgcccgttgttatggtatgtgggttcatcaactaatggctgaactgggattggaaatgaaccatattttaagttcatcacttgttgatatgtatgcaaaatgtggaagaattgacgtggcaattgggatattcatgacaattaagagaaaccatgtctctgtatggaacacaatgattggtggcctggcagcacatggtcttggatctgatgcggtgatgttcttccgtgagatggaaagtgaaggtcttgttcctgatggggttacatttgttgcactcttgacagcatgcagccattccggcatggttgaagaggctcgtcaatactttgaagcaatgactacaaagtattctatcactccgaggattgaacattatggtgcaatggtggatactttgtcacgagctgggctactggatgaagcatatgacttggtaaagacaatgaatgtgaaacctgatgctgtgatatggagggcattactcagtgcttgttgcaggtaccggcaaactaaactaggtgagatcaccgtcaaggagatagcgttccagggcagtggtgactatacccttctttcaaacatctactcatctgcgaatagatgggaagattcagaggaagtatggaaagagaggaagaaaaagggaattaggaagagcaagggcttgagttgggttgagttagggaggagcacccatgaatttaaagctggtgaccgatctcatcctgacactgatggcatttataaagtgttgcatcggttatcaaacaaggccaagagtgaaggatatattccattgactgaactagtgtccaaagatgtctctgaggaggaaagagaagaaaaccttaccgtccacagtgagaagctagcggtggcatatagtatccttaagacaatgccaaggacagagataatggtgtcaaagaatctgcagacttgcagtgattgtcatgaatggatgaagatagtctcgaaggtactttgtcgtgttataattatgagggatagagttcgatttcaccgttttgaaggtggatgctgctcctgtaaagattattggtaattcctgttttggagacagatgctgctcctgtaaagactgttggtcagtactgtttggagaactacagaattgatttgtttagcatcatatcaacagttctgacaggaggtacaagtagaaccagtggatataactacattcccttgtggagtcatgggtggtctatgtgactatgccaatatatgacccctataatacatggtattatcattttgtctgcacagcaggtgacatgaaacaatggaaatatgggtaaaccagcgcacacatacatgaaattgtgtactatacacgcacccaccaagtatgtacaagtatcctacagacttgaagcctgtcacccacaatagaaagatcaaaatattatcttctggatttttttgtattttctaattgactttgatgctcttatggctttccatgtgtgtcatggaaaatttttactggagtatggcattttctgcacttctgccatcttcgcacttttttggttgctttcgtggagttgatgtgtcacaggctcacagcatatgatggctgctttcttttctgtttggttgtattcttgtacatctcttctccgactagtttaatttttccaactaaagttattctttgtttattgtttcaggattaacagtgaggggacattctgtattcagtaatatcaagtttctacaaataaataggtgtaggaatacctttgatgccccatttacactgtttgtgcaatgtctttatattatattttctgtgggaacttccatcaactaaggaattcaataggaagctgttctagtaccggtttgcttaaatgcggattaatctatagaactgtacttcagaacagaggaaataaaactcgaccaatcagtacgacaatactagcaagaagtacaagaaaagaaagtaagcagtcattcaaaaccagccgtcatttgcatagtgaatcggttgagtcatcgattgaagtgctcaaacagtcagatcttgagcatcttaaatcacttcaatgctacaatattccacaaaaggtttccggagtgaagaccgattggcctgcaactatccttgtttttgatattgaaactacaggcttctcacgccgctatgaaagaatcattgagtttgctgttcgggatcttatgggaggaaagaatagcactatccagacactcataaatcctgagagagagataaaaaatgcatatgttcatggtattagcagcagcatggtctgcaaacctgatataccaaggtatgacattttcaacagatgctcagctgatattgttaaattatttcttcttatgcaaactgtacttttcatgcaataaggaaagtatggaagtaaaactgtaaaagggcatccgagagaacagtggactagttgcaaactagatattgtatctttccttgcttgcaaccattgacctgccatttttttattgtgatgctgtcttctgaaaaaaaggttccctcttctagatattccgaaaattcggtgctagaagaaatgtgaactgatatcaaaattccatttcctttttctgggataggtgcctcttttaatcatctccctttagtataagcttcagtcattgagcactaggatgccaaaacttgattacgttggactttttatgttctgtaataattatagaagttcttttttctggctatgcagatttcgggagtttatccctcttctattacagtatgttttgagtcgtcaaatggctgataaaccagttctgtgggtcgctcataatggacgtagctttgatgtaccatttctcatgtatgaattccaacggagtaaaatagagatgcctggtgactggctatttgtagatacacttccaattgcaaggcaattgattggttctgatggtacgttcttttgtcaagtgttctgtttacttgcatgaacttaacttttctgactaatttgcactgctagagattagagctatatacagttcaccctgatattacagtgtaactagcaaaacaaactagttttgctattcaacttccaacttttcataagcattcatgtgattttaattgttatgttgaatcctgaggcaaaaataaagttaagttagcaatattaggtcttctctaaagaaagttcagtttttatcactggattctttttctttttttcttttttactgcaagagagaaggcataatatgggagcaaagcaggtgactgaaagtaaaaccttcctgttattttatttgcaggggaaaaactgaaatctgtatctttagacaatctgagggagcactacaagatcccattggcagggagcgctcatcgagcaatgcaggatgtgatcaccctctgctatgttctccagaagttgaccttcgagctgaaactaactgttcctcagctccttgagaggtcattccgggtttccgatctttcaatccctcgccctggaaaatgactgcagttgcctcgccgaaaggatcacacagaaacctggattgtttcattgtccttgtatccagtgctgttgtttcagatcccagctcatatgttattccgacaacagaataaggcaggcctgatcgttaccgtgatattaatcatttttagtttagtactgatacttgttgccccttgaaacattgattagacgtacatttattcaaagttgtaaagaccaaaacatgtcctggtttccaacctggaagaaatgaaacgttcttgactatctgtagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0301400, RefSeq:Os03g0301400