Os03g0309000
| Gene Name |
Os03g0309000 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001056444.1 GI:115452616 GeneID:4332622 |
| Length |
4229 bp |
| Definition |
Oryza sativa Japonica Group Os03g0309000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:11058229..11062457 |
| Sequence Coding Region |
11058568..11058867,11059671..11059771,11060355..11060423,11060562..11060632,11060721..11060875 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:11058229..11062457 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:11058229..11062457 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaggatcctcgcgctcgtcgtggcggccgcggccctcctcgccgccgccgccaccgcgcacgagcaccacggcgaggcgcccacctgcgccggcggcggcagcgggcgcgtgctcgcggagttccgtccaggggaggtgaccctggacgggcacccggcagactgggacggcgtggaggcgtcggagttcgcgctgcttccggctcttgaccccgacgaggacaaggcctacgccggcggcaaggtcttcgtcaaggctgtgcatgatggcgtcaacattttcttcatgctgaaagttgatggggattacacctacactaaaggcgaaaataagaagtgcccttctgttgctctgatgttccaaattggagagaaagcaacgtactataatatgggagggtgtaaagatatgcctggttcatgcacaagcaaaagttgcagaggtcaagaggttgacattatgcacttttctgttggaaatgctatccctggacgtctttatggtggaaatcacatagataatgcagacggaaatggcggtgatagattcggtcatcttgttgatttatattcatggaatccgcattgccgataccttgatgggataggccctaaagagaataattcaaatgctcagaatgattggcatggggcatggtggcatagctctctgacctttcactcaggctttgtggatgatgacagtccttacggaaaacaagatgagaagggcacatattattttgagttttcaaggcccctaagaacaatggatcgattacagcaggatgcacagttcacgataggtgggcccaacagtatggctgtggctttctggtacccaaacgatggcaaaccatggagcaagtccgagcattattcggccagctgcgactggttggttcttgatattcaaccatccatggaagctgcacattaccgcccagctccaaatcgttcatgggatgctgcaactgcctttgccttgcttctttcggtagtagcaatctgtatatccgtttttgtgggctacggggcttctaagaacaggagcagcgtccaatttacaccacttgagcagatctag</cdnaseq> |
| Protein Sequence |
<aaseq>MRILALVVAAAALLAAAATAHEHHGEAPTCAGGGSGRVLAEFRP GEVTLDGHPADWDGVEASEFALLPALDPDEDKAYAGGKVFVKAVHDGVNIFFMLKVDG DYTYTKGENKKCPSVALMFQIGEKATYYNMGGCKDMPGSCTSKSCRGQEVDIMHFSVG NAIPGRLYGGNHIDNADGNGGDRFGHLVDLYSWNPHCRYLDGIGPKENNSNAQNDWHG AWWHSSLTFHSGFVDDDSPYGKQDEKGTYYFEFSRPLRTMDRLQQDAQFTIGGPNSMA VAFWYPNDGKPWSKSEHYSASCDWLVLDIQPSMEAAHYRPAPNRSWDAATAFALLLSV VAICISVFVGYGASKNRSSVQFTPLEQI</aaseq> |
| Gene Sequence |
<dnaseqindica>3591..3890#2687..2787#2035..2103#1826..1896#1583..1737#1269..1335#670..737#91..348#gaatcaaaactcagaccaccaccaagcctcgcggtttctcgccgtccgagcggccaagcggagagcgcctcgatccgcccgccgccgcgcatgaggatcctcgcgctcgtcgtggcggccgcggccctcctcgccgccgccgccaccgcgcacgagcaccacggcgaggcgcccacctgcgccggcggcggcagcgggcgcgtgctcgcggagttccgtccaggggaggtgaccctggacgggcacccggcagactgggacggcgtggaggcgtcggagttcgcgctgcttccggctcttgaccccgacgaggacaaggcctacgccggcggcaaggtcttcgtcaaggtgcgccctccctgttgctctgtctacgcctcgatcgcttactgcgcaggagcacacggatcttgataaataaggtggatcgtatgatagaaactactatgtcgtatgttgaaatggtgatgggtgaacccgtctcatgaaccttcgtgattacccgtctcatgaaccttcgtgattatgtagcatttggggtggtaaatcttagatttgtcagaagtatcgaacttaggtagcttcctgaagtaatgggagatgcgatccatgtgttggatgcatcgtaaatggtggcgttgtttaactcttttggattgacatgtgcaggctgtgcatgatggcgtcaacattttcttcatgctgaaagttgatggggattacacctacactaaagggtactttcgccctctttcattgtgcacatatatactaagcgtggattgaggccattggtctgcatggcagaccggtagtggagttcgtagtgctctttatgttcactcttttagtcttttagttgtgatgttacattggattggataaattggacagccatattgatttgttcactagttcaagaaagtgccatactgccatggtgataggttctctctctctctaatccaaaacgtctttttttaacccaattttaatgtactaaagctgtagctatgtgggtgatggggacagagggatttatacactagtttcagttagtggtattacatggtcacagaatgccagtctctcttattgccttggtcttctctatggtctcatggtattttatttgaccgaggtactcatgatcaatatggagaaaaatgatatggggtgttagccatgttattctgcttcttcagatgtgtggttctgacttctgagcaagtaacctgtgcttttgattggcttgttgaacattacagcgaaaataagaagtgcccttctgttgctctgatgttccaaattggagagaaagcaacgtactataatgtaagtttgcgatgctgtaattattcccaaatctcaagtcatagtgtattagtgttcgtgtaagcggctaagcgctaaccaacatgtgtcagtttggcactattgaaatattacaaaagtagttagatctatttcttacagtgtgctgaccactgagcaattttttgagtatatatggataattctacgtgacttttgctgctctattatcacatcatctcaaatgttgagctgtatggccttttagatgggagggtgtaaagatatgcctggttcatgcacaagcaaaagttgcagaggtcaagaggttgacattatgcacttttctgttggaaatgctatccctggacgtctttatggtggaaatcacatagataatgcagacggaaatggcggtgataggtaatttcaacaatgcctttcttgatggtgtttgtgtagttatatgtgatagcatgccaaaagtcactattgatctttgggtgtgcagattcggtcatcttgttgatttatattcatggaatccgcattgccgataccttgatgggataggccctaaaggtacttctatttccaaaatgcagaaagtatcatcttatttgtcatttccactaaattagaatattgaagatattttcggttttgtctgtgtcaacctttcgtgaatgaatgttgagcttgaatcatgatttgtttcagagaataattcaaatgctcagaatgattggcatggggcatggtggcatagctctctgacctttcactcaggtaagccatgagctcctcctgtcctttcttccaggtttttgtcattgaagctattaagtgctgaaaattctcattagactcaccattgcagcataccttaaacgttagagatgttttacagtgcttggaaagtactagaggtacctccactttaaagtcatcaacggctgatatttctttatagttgaggtgtctctattaccttgcaagcacagccatgtatatttctcaaagcgaaggcacctctaggcatcacagatctcaaaaatgttacccttctcattcatatgagtataaatctgctcatatgccagatggtatctagaggagttaaggcatacatataccgaaacagaagcaaacgacatttggaggattaatcttctcgattcctccttttttgcatgctataaaatgtagtgcttaatggacttcgactgcagcatatggaagctttatcttaagaccattcagacagtcaacaaataaacatttttttatcattgcataagctttgatggaaaagggaaatctacccaaataaaattatattgtctgactatcatgtgttcttcctctccaggctttgtggatgatgacagtccttacggaaaacaagatgagaagggcacatattattttgagttttcaaggcccctaagaacaatggatcgattacagcaggtagttatctactattgtttcaattcttcccaatattccatgagcaccagcatgcctagagacatgtgcataaatgcatatatgaagttaccaacaaatagttatacattatatttctaatgtaccgacagctaggtctgcaattttccagtattgcaactgtgattgtgtctaaataacattgccatagttgggtggccatcctgctcatcctcttcttactaagacgcgtgcaccttattatgatccgttagcaaggttctaaacactgctctacttgacctaacatgtaacctctttgcgtatgagtatagtaattgttttaaccacgtgattattcaggttacttgtacaaccaggcatttgcaaggtggtcagattaggatgatacatgccagttttttttgtgacacaggatagttgtctagtagtattatcgattatttggtcatatactcatatgatagctttgattacttggtatctaaggttgaattgagtaaaaaacttggctggtgggggaaagattgccccccatggtatttcacaaagaagagctcaaccggagcccagccaagaaaggtcacagaagccggcccccctcatacatggggatgccgccccctgtggttcgggaattaagcccttaacccatgctttcaggctcagcccactactagcgagtgacatctttttacccaacctgaaaatcgctcccacgggatggaatagcttttggtatggttgcattaccaaatttgttttactagattttgcgcttaaatgttcctttggccatgcaggatgcacagttcacgataggtgggcccaacagtatggctgtggctttctggtacccaaacgatggcaaaccatggagcaagtccgagcattattcggccagctgcgactggttggttcttgatattcaaccatccatggaagctgcacattaccgcccagctccaaatcgttcatgggatgctgcaactgcctttgccttgcttctttcggtagtagcaatctgtatatccgtttttgtgggctacggggcttctaagaacaggagcagcgtccaatttacaccacttgagcagatctagttcgtttgctggagaaaagaatttgatggtctcgagtttcattatttgtgatgcgacaagggacgctatttcatctgttgctgatgcactttcatgatcctacataacacttctacgtcgagggattgctgtgttgcatctttgtaatctagtgtaggacactgaaaatacatacgattcagaatttcagactagattttggttttatacctgtacggttcattttctgtaaatgatgtatgtcggctacatgcacatctagaacttacacttttacgttcttaaatttgagcacagatgattttcatacaaatgttgaagtgcttcatgtgatggctg</dnaseqindica> |
| External Link(s) |
