Os03g0316200

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0316200| Description = Similar to Galactinol synthase (Fragment)| Version = NM_001056474.1 GI:115452676 GeneID:4332654| Length = 1690 bp| ...")
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Gene Name

Os03g0316200

Description

Similar to Galactinol synthase (Fragment)

Version

NM_001056474.1 GI:115452676 GeneID:4332654

Length

1690 bp

Definition

Oryza sativa Japonica Group Os03g0316200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11417863..11419552

Sequence Coding Region

11417981..11418307,11418409..11418732,11418835..11418969,11419055..11419294

Expression

GEO Profiles:Os03g0316200

Genome Context

<gbrowseImage1> name=NC_008396:11417863..11419552 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11417863..11419552 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctccccagcttgccggcaagatgaccgccaaggccgccgcggcggtgaagcccgcgacgagggcgtacgtgacgttcctcgcgggcgacggtgactactggaagggcgttgtcgggctggccaagggccttcgcaaggtgggctcggcctacccgctggtggtcgccgtcctccccgacgtgccggagtcccaccgccgcatcctcatctcccagggctgcatcgtccgggagatcgagccggtgtacccgccggagaaccagacgcagttcgccatggcctactacgtcatcaactactccaagctccgcatctgggagttcgtggagtacgagaggatggtgtaccttgacgccgacatccaggtgttcgacaacatcgacgagctgttcgagctgcccaaggggcacttctacgcggtgatggactgcttctgcgagaagacgtggagccacaccccgcagtaccagatcggctactgccagcagtgccccgacaaggtggcgtggccgaccgccgagctcggcccgccgccggcgctctacttcaacgccggcatgttcgtgcacgagcccagcatggccaccgccaagtccctgctcgacactctgcgcgtcaccacgcccactcccttcgcggagcaggatttcctgaacatgttcttcagggagcagtacaagccgatcccactgatctacaaccttgtcctggccatgctctggaggcatccagagaacgtccagctcgagaaggtcaaggtcgtgcactactgcgcagcgggatcgaagccgtggaggtacacgggcaaggaggcgaacatggacagggaggacatcaagatgctggtcaagaagtggtgggacgtctacaacgacggcagcctggacttcaagggcctcccgcccatcgcggccgccgacgacgccgacgaggtcgaggcggcggccaagaagccgctgcgcgccgcgctggcggaggcccgcaccgtcaagtacgtcacggcgccatcggccgcgtga</cdnaseq>

Protein Sequence

<aaseq>MAPPQLAGKMTAKAAAAVKPATRAYVTFLAGDGDYWKGVVGLAK GLRKVGSAYPLVVAVLPDVPESHRRILISQGCIVREIEPVYPPENQTQFAMAYYVINY SKLRIWEFVEYERMVYLDADIQVFDNIDELFELPKGHFYAVMDCFCEKTWSHTPQYQI GYCQQCPDKVAWPTAELGPPPALYFNAGMFVHEPSMATAKSLLDTLRVTTPTPFAEQD FLNMFFREQYKPIPLIYNLVLAMLWRHPENVQLEKVKVVHYCAAGSKPWRYTGKEANM DREDIKMLVKKWWDVYNDGSLDFKGLPPIAAADDADEVEAAAKKPLRAALAEARTVKY VTAPSAA</aaseq>

Gene Sequence

<dnaseqindica>119..445#547..870#973..1107#1193..1432#gaaacccaagcaaaccagcagctactaagcaaagcacaaccaaagcttaagcttcctccaaatcctcacacaagaactcgctcttcttaaccctcccggattttctccgacgagatcgatggctcctccccagcttgccggcaagatgaccgccaaggccgccgcggcggtgaagcccgcgacgagggcgtacgtgacgttcctcgcgggcgacggtgactactggaagggcgttgtcgggctggccaagggccttcgcaaggtgggctcggcctacccgctggtggtcgccgtcctccccgacgtgccggagtcccaccgccgcatcctcatctcccagggctgcatcgtccgggagatcgagccggtgtacccgccggagaaccagacgcagttcgccatggcctactacgtcatcaactactccaagctccgcatctgggaggtaattaattaatcaatgagctcgtcatcgcccattcttgatttgcgccagcgagcgtgctcacgtgtttgtgtggggttattgatcctggttgtttgcagttcgtggagtacgagaggatggtgtaccttgacgccgacatccaggtgttcgacaacatcgacgagctgttcgagctgcccaaggggcacttctacgcggtgatggactgcttctgcgagaagacgtggagccacaccccgcagtaccagatcggctactgccagcagtgccccgacaaggtggcgtggccgaccgccgagctcggcccgccgccggcgctctacttcaacgccggcatgttcgtgcacgagcccagcatggccaccgccaagtccctgctcgacactctgcgcgtcaccacgcccactcccttcgcggagcaggtaaagactcgtgctggcataggcgccataaattaattcttggttctaggcttctagcgtgtcggattggtgcttactgttcttggtttctcgaaattgcaggatttcctgaacatgttcttcagggagcagtacaagccgatcccactgatctacaaccttgtcctggccatgctctggaggcatccagagaacgtccagctcgagaaggtcaaggtcgtgcactactgcgcagcggtacgtggatcgtcaccaaactgaccgatggccgcttgatatatgtttcgtatgctcatctggatcggtaatccaattgttgcagggatcgaagccgtggaggtacacgggcaaggaggcgaacatggacagggaggacatcaagatgctggtcaagaagtggtgggacgtctacaacgacggcagcctggacttcaagggcctcccgcccatcgcggccgccgacgacgccgacgaggtcgaggcggcggccaagaagccgctgcgcgccgcgctggcggaggcccgcaccgtcaagtacgtcacggcgccatcggccgcgtgatcgtacggccactgtcgcttccctccggtgcccgggcgtccggctccggcggcgtacctctgcatcccgtatcttggtatttttttaggatgtccaatttgggatcagtatgttccttctagtacacttcacaaatgtaacgaggcttgtttagaatacgtatgctgtggattttgtgaatatctgttccttttgagtcaaaactcaaccagtgtgatctttgtattttgtggaaatcgatatatcataggaagttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0316200, RefSeq:Os03g0316200