Os03g0317000

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0317000| Description = Similar to High-glucose-regulated protein 8-like| Version = NM_001056476.1 GI:115452680 GeneID:4332656| Length = 543...")
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Gene Name

Os03g0317000

Description

Similar to High-glucose-regulated protein 8-like

Version

NM_001056476.1 GI:115452680 GeneID:4332656

Length

5439 bp

Definition

Oryza sativa Japonica Group Os03g0317000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11453312..11458750

Sequence Coding Region

11454693..11454695,11455101..11455248,11455331..11455404,11455511..11456008,11456524..11456868
,11456953..11457165,11457444..11458292

Expression

GEO Profiles:Os03g0317000

Genome Context

<gbrowseImage1> name=NC_008396:11453312..11458750 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11453312..11458750 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcctggttttggtacaagttcttccatgggttctgcatctcaccctgctagaatcgagtataacacaagtagcaatgtgtcatctcaatacatatatgagcagggtctttattatccagcaacaaacggctatgcttactatgcaggctttgagccaccagttgaatggagtgatcacactaattttgtgggggtagatggtcaaaacctacaactttcaaatgaaaaccttccatatgtatattgcacacctggctatggtttttcttattactccccagatcagtacacctatatgcctggcatggtaatgggagttgatggctcttttgtaggaagccaacagtattttgctagtccatatcaacttcctggctcgccatctggtttcttcccgatgtctattcagcccaccacagatttcagctcaactgtttctgcagaacctcctttacttagtactggcactggtacatctgctgttgctagtaggcttgctaacaccagtatgaaaaacaaatatcagatgtctggaaatacagctccagcttctcagactgccccttctggaagtccagctgttggacgtcctcagcaggcctacgaaaacgaaagcacaaataagccatctaatccgcctgatgctaacatgagtaggcgtgacaaatcctcaacctcccttgtcacagttccagtggatgcttcatcgactgacaaggatggaaaatctgatgaaggtaatcagtcaaaagaacatgtgcaatccattcaggttacttcaggtcccatgtctggcgaaagtggacaaggcaaagcaacatcaaacagtacattggaaaaaattatgatacatcctgaccaatacaataaggttcactttcctgttgatcatccagatgccaagttttttgtcatcaaatcttacagcgaggatgatgtacataagagcattaaatataatgtatggtcaagcacacctaatggcaacaagaggttggatgcagcctactcagatgtacaaggaagagctctgggaaagtgtccaatatttctctttttttctgttaatgctagcgggcagttctgtggtgttgctgaaatggttggtcctgttgattttcacaaagacatggatttctggcagcaggataagtggtctgggagcttcccggtgaagtggcacctagtaaaggatgtgcccaactccacctttcggcacattatattagagaataacgagaacaagcctgttaccaacagccgggatacacaagagattccttttaagtctgggacaaacatgctgaagctatttaaggatggcccattgacaacatctattcttgatgacttctcgttttatgaagggagacagaaagcaatgctagaagagaaatgcagatgttcgggtagaaattttgatgtacgcatgtatgttccagcatttatcgctaaaagcagtgttgttgcggtaggtgaaccttcagaagtaggtaaaggccagtttagcagcaaagatctacattcaggggatgttgaacaggataatggtgcatgtgagcaacctgacaagctgaaccaaatgaaagacatactggccactgaagcactcaaaacggatggtggagcatttgttgggcaacttgagcatgcaaaaacaaaccaaggtagtttagatgccagagttgatcatcagagtgaacattgttcctgttctaacccaccagaaaacggtgaaagaaaacctgatagcttgagcgaactagtaaaactaaatgggaagagtcagcgtgattctgaagcacaacctggaataaacttatcagaacccaattattcttctgtcaagaaaggtcttcctgaagagttctgtggtcagaacccctcaaattttatgaaagagggaggagctggtacagtcgaggatagaaagtctacaaaatttgttaccaaatcacagggctttccatctagtcgagtgaacaaggaagcgaaaggcaatggtaatgagatggcaaggatcactacaactggtgttgtgaaggttggctcagtgcacatcaaggtaaatgtggcaggtgagccgtcatcagagattataggtgatgaaaatgggcttccctga</cdnaseq>

Protein Sequence

<aaseq>MMPGFGTSSSMGSASHPARIEYNTSSNVSSQYIYEQGLYYPATN GYAYYAGFEPPVEWSDHTNFVGVDGQNLQLSNENLPYVYCTPGYGFSYYSPDQYTYMP GMVMGVDGSFVGSQQYFASPYQLPGSPSGFFPMSIQPTTDFSSTVSAEPPLLSTGTGT SAVASRLANTSMKNKYQMSGNTAPASQTAPSGSPAVGRPQQAYENESTNKPSNPPDAN MSRRDKSSTSLVTVPVDASSTDKDGKSDEGNQSKEHVQSIQVTSGPMSGESGQGKATS NSTLEKIMIHPDQYNKVHFPVDHPDAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKRL DAAYSDVQGRALGKCPIFLFFSVNASGQFCGVAEMVGPVDFHKDMDFWQQDKWSGSFP VKWHLVKDVPNSTFRHIILENNENKPVTNSRDTQEIPFKSGTNMLKLFKDGPLTTSIL DDFSFYEGRQKAMLEEKCRCSGRNFDVRMYVPAFIAKSSVVAVGEPSEVGKGQFSSKD LHSGDVEQDNGACEQPDKLNQMKDILATEALKTDGGAFVGQLEHAKTNQGSLDARVDH QSEHCSCSNPPENGERKPDSLSELVKLNGKSQRDSEAQPGINLSEPNYSSVKKGLPEE FCGQNPSNFMKEGGAGTVEDRKSTKFVTKSQGFPSSRVNKEAKGNGNEMARITTTGVV KVGSVHIKVNVAGEPSSEIIGDENGLP</aaseq>

Gene Sequence

<dnaseqindica>1382..1384#1790..1937#2020..2093#2200..2697#3213..3557#3642..3854#4133..4981#gccctcctcctcctcctcctttcccttctctcctcgccttcgccttcgccttcgcctcctctcctcccgacctcccccatcgcgtcgccgcgacgccaccatgctcgctcctcgcgcgtcctagtagcggccgacgcacctccctccctcccccttccgcgcgccatggctcgggtctccgccgccgcagccgccgcggaacgccagctcgccgtggcctgattgattgtttgattgatttggctacgtcgaccgtctccctcgctctctctctgcacgtgcttttacggtagtccccccccttgacccctttcggtgcgctgttgcgattctgtggtgaattcgatttaagggtggatttctctgggtacgaatggatatggtggtgccgggtaatgattgttttgtgggcgtgacgggtgattggatacggtggtttttcagtagtggtagtcttgtgttagggttgttgattgcgcacggatttcctctgttgtcttgagctaaattgccagaattggtggttcggatgttgataaacgcctaggtagtacctgttaggttcgttcaatttgtcaccagaataatttctgaacgaatttttgccagtctgggtgttggtctgcttcttgttctggtgccgttggagggctatttctgcaagaactacagttatctgttcgttttggatggttatctggtgagctgaacggctgcatggtgccaatttgctccgaggtgaaaaccttgcttgggaattagagttgactgctagtgctgatgtatctttggagctttggtgatcaaagcctcaaaggacatgacctgtgcaataaacaattacaccttcttgcaacttggctgcattactttgacaaagttttctagtagactctgcagccaattgcatgggaaacaaaaatcaccacttcaattgttctgcggaattatcccaagtcccgagttttctgttgtgtgcagaaaagaatacgtggtgcttaatttgcatcaatattctatgcttcctcgagcatcagcacgtatgccagaattagtatattttagttgcttgtggttttgttagacttgggtctgttgttagtacagtggtcctgattatactatggaatatattccattattaacaatctgtgcttaaattttaatgtaggtactaggcctttgagttgttatacaacaactttttttttctggagaaagatgtctccaagtttgtagtattcactctgtttttctcaatcaacagtaaaatctgacccccttttttatcttttttcagaatctcgtaggcatttacctattatcaaaaaccagcacttctgatccaaaaaggatacaaaattgagagttagagatatccatggtaactttatcctgcaacataaaaccttcatgcagactgatgcgtttgttgtattgtttctttattttgtttctcgatgcctttgacaattcagagcaatagagttcattaatttgagctgttcatttttttaatttagatgattctagacttgtgtttttctccaatctgcagaaagattgcatattgttcttctgatatgctttataaatatattcatatcttcctccaataaaaagaggaaatgaaaacaacaaagtttacatgaaaaaggagttgatttttaactgcagacacaatggtgccttttgtgtttgataaaggactgcagaattttttttatctcatgagtatttggagatattggttgtcccacacttagtggctgtgtttctatggtttcagatgcctggttttggtacaagttcttccatgggttctgcatctcaccctgctagaatcgagtataacacaagtagcaatgtgtcatctcaatacatatatgagcagggtctttattatccagcaacaaacggctatgcttactatgcaggtgtgtgttcccctagcctcaatctatttatatttgtgggttcaatcctcgatgcttattgttttggtttcacttttggaaggctttgagccaccagttgaatggagtgatcacactaattttgtgggggtagatggtcaaaacctacaactttcagtaagtttcatagtagaaccctggttattattatgattagaacatttttaaattatttattattattgtgattgtttcttgatgactattttttttggttgcacagaatgaaaaccttccatatgtatattgcacacctggctatggtttttcttattactccccagatcagtacacctatatgcctggcatggtaatgggagttgatggctcttttgtaggaagccaacagtattttgctagtccatatcaacttcctggctcgccatctggtttcttcccgatgtctattcagcccaccacagatttcagctcaactgtttctgcagaacctcctttacttagtactggcactggtacatctgctgttgctagtaggcttgctaacaccagtatgaaaaacaaatatcagatgtctggaaatacagctccagcttctcagactgccccttctggaagtccagctgttggacgtcctcagcaggcctacgaaaacgaaagcacaaataagccatctaatccgcctgatgctaacatgagtaggcgtgacaaatcctcaacctcccttgtcacagttccagtggatgcttcatcgactgacaaggtatttgattaaacttgaatatatacagtttaagagttgcaccttctggcaccaaaaggaaaaattacacaagtactttcttttttttgtatataaaaaatgtgcatacttctgcctttattttgctatagttctcatctgtacttctgggctttagtattttattgcttttggagactatgtacctagtatgtgttaatgttcatactgaacactgagttaggacctacaataatctattggcttgcattgtggattctaattaaaagtaatgcagtactaaaagcaaacattcttatgctccctcatttttcttcttctgtttgtttacttcgtgaaaattattcgttgtctcatggagttacggtaccattctttacgtcactttcatgatgctgtttcttttgcagtaaacagcctcttttgttatacccatcagctaccaactagcgttcacaagtattatgtttccaaaacttatattaaacctagagttttgattatgccacctgcaggatggaaaatctgatgaaggtaatcagtcaaaagaacatgtgcaatccattcaggttacttcaggtcccatgtctggcgaaagtggacaaggcaaagcaacatcaaacagtacattggaaaaaattatgatacatcctgaccaatacaataaggttcactttcctgttgatcatccagatgccaagttttttgtcatcaaatcttacagcgaggatgatgtacataagagcattaaatataatgtatggtcaagcacacctaatggcaacaagaggttggatgcagcctactcagatgtacaaggaagagctctgggaaagtgtccaatatttctctttttttctgtgagtgttgatgagtcctcttttttcttttcttttcataaaattgttatttgtgaatttgacttactaacacttatactttaggttaatgctagcgggcagttctgtggtgttgctgaaatggttggtcctgttgattttcacaaagacatggatttctggcagcaggataagtggtctgggagcttcccggtgaagtggcacctagtaaaggatgtgcccaactccacctttcggcacattatattagagaataacgagaacaagcctgttaccaacagccgggatacacaagaggtaaattttgataaatttcctggaatacaatgattatatactgtgtgttgtatcaatatgttcagttacttaaacagttgaaagtctagaggtcgaaataattgaaatatagatggaattatggaactgtaaaatcttatagtttatttgttctaatctaacatggttcttctgtctattgttatatagtatatacacatttgaatatgcttttattgaacctccctaactagggtcaccatttgttaatgtcctgatgactgacttcttttgtgtagattccttttaagtctgggacaaacatgctgaagctatttaaggatggcccattgacaacatctattcttgatgacttctcgttttatgaagggagacagaaagcaatgctagaagagaaatgcagatgttcgggtagaaattttgatgtacgcatgtatgttccagcatttatcgctaaaagcagtgttgttgcggtaggtgaaccttcagaagtaggtaaaggccagtttagcagcaaagatctacattcaggggatgttgaacaggataatggtgcatgtgagcaacctgacaagctgaaccaaatgaaagacatactggccactgaagcactcaaaacggatggtggagcatttgttgggcaacttgagcatgcaaaaacaaaccaaggtagtttagatgccagagttgatcatcagagtgaacattgttcctgttctaacccaccagaaaacggtgaaagaaaacctgatagcttgagcgaactagtaaaactaaatgggaagagtcagcgtgattctgaagcacaacctggaataaacttatcagaacccaattattcttctgtcaagaaaggtcttcctgaagagttctgtggtcagaacccctcaaattttatgaaagagggaggagctggtacagtcgaggatagaaagtctacaaaatttgttaccaaatcacagggctttccatctagtcgagtgaacaaggaagcgaaaggcaatggtaatgagatggcaaggatcactacaactggtgttgtgaaggttggctcagtgcacatcaaggtaaatgtggcaggtgagccgtcatcagagattataggtgatgaaaatgggcttccctgagagtttaaacgaatggtgcagaaggaacggatggtgttaactgtttagtggggcgtgtgtctctttgggggttgggagggagggttgggtggtgaggtgaggtgaggtgaggtcttagcttaatgattaattgtgttggtcaggttttgctttttgcgggcattacagttcagtgagcttgacattgaggttgctattgggtataggcatttcgctttgttttttgggtacataacctccaacaggtcatagatgttttgtggtgggaaaaatgtttccattttgttgttatggcaggcagtcctttagtttcatctgctcatatttggtgagtgaatgatatcaaaggagaggagccattcattgttgacagcgactgggttttgcatttggtggtattgggtgaaatgtaatcgtgttcaccattataccgaattaccaatacagaaaatatcgag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0317000, RefSeq:Os03g0317000