Os03g0318400

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0318400| Description = Peptidase A1, pepsin family protein| Version = NM_001056478.1 GI:115452684 GeneID:4332658| Length = 1515 bp| Defini...")
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Gene Name

Os03g0318400

Description

Peptidase A1, pepsin family protein

Version

NM_001056478.1 GI:115452684 GeneID:4332658

Length

1515 bp

Definition

Oryza sativa Japonica Group Os03g0318400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11518299..11519813

Sequence Coding Region

11518429..11519733

Expression

GEO Profiles:Os03g0318400

Genome Context

<gbrowseImage1> name=NC_008396:11518299..11519813 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11518299..11519813 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaaatctagccttcgtcatagtcacattgcttgcagcgcttgccatttctcgctgcaatgctgcggcgaccgtccggatgcagctcacgcacgccgacgccgggcgcggcctggccgcgcgggagctgatgcagcgcatggcgctgcgcagcaaggcccgcgcagcgcggcggctctcgagctcagcgagcgcgccggtatcccccgggacctacgacaacggcgtccctacgacggagtacctggtgcacttggccatcggcacgccgccgcagcccgtgcagctgacgctcgacaccggcagcgacctcatctggacgcagtgccagccgtgccccgcatgcttcgaccaggctctcccttacttcgacccgtcgacatcctccacgctctcgctgacttcctgcgactccacgctgtgccagggcctgccggttgcgtcgtgcggcagcccaaagttctggccgaaccagacatgcgtatacacgtactcctacggcgacaagtcggtgacgacaggcttcctcgaagtggacaagttcacgttcgtcggcgccggcgcgtccgtgcccggcgtggcgttcggctgcggcctctttaacaacggggttttcaagtccaacgagaccggcatcgccgggttcggccgcggcccactgtccctgccgtcgcagctcaaagtgggcaacttctcccactgcttcaccgccgtaaacggattgaaaccgagcactgtcctgctcgacctgccggccgatctctacaagagtggccgcggcgccgtccagtccacccctctaatccagaatcctgccaatccaactttttactacctctcgctgaagggcatcaccgtcgggtcgacgaggctgccggtgccggagtccgagttcgctctaaagaacgggaccggcggaacgatcatcgactccggcacggccatgacgtcgctgccgacgcgtgtttaccggctcgtccgtgacgcgttcgccgcgcaggtgaagcttcccgtggtgtccggcaacacgacggatccctacttctgtttgtcggcgccgctgcgggcgaaaccgtacgtgccgaagctggtgctgcacttcgagggcgcgacgatggacctgccccgggagaactacgtgttcgaggtcgaggacgcgggcagcagtatcctctgccttgccattattgaaggcggagaggtgaccaccataggcaatttccagcagcagaacatgcacgtactctatgatctgcagaatagcaagctgtccttcgtccctgctcagtgcgacaaactttag</cdnaseq>

Protein Sequence

<aaseq>MQNLAFVIVTLLAALAISRCNAAATVRMQLTHADAGRGLAAREL MQRMALRSKARAARRLSSSASAPVSPGTYDNGVPTTEYLVHLAIGTPPQPVQLTLDTG SDLIWTQCQPCPACFDQALPYFDPSTSSTLSLTSCDSTLCQGLPVASCGSPKFWPNQT CVYTYSYGDKSVTTGFLEVDKFTFVGAGASVPGVAFGCGLFNNGVFKSNETGIAGFGR GPLSLPSQLKVGNFSHCFTAVNGLKPSTVLLDLPADLYKSGRGAVQSTPLIQNPANPT FYYLSLKGITVGSTRLPVPESEFALKNGTGGTIIDSGTAMTSLPTRVYRLVRDAFAAQ VKLPVVSGNTTDPYFCLSAPLRAKPYVPKLVLHFEGATMDLPRENYVFEVEDAGSSIL CLAIIEGGEVTTIGNFQQQNMHVLYDLQNSKLSFVPAQCDKL</aaseq>

Gene Sequence

<dnaseqindica>131..1435#atcacaaactcatctagctagcgggctagcactggcactggcactggcactggcactggcaccggagagagttaacagacacagtcaacagatacttcttgcacatcggttaatcaagcaaccggtcgagatgcaaaatctagccttcgtcatagtcacattgcttgcagcgcttgccatttctcgctgcaatgctgcggcgaccgtccggatgcagctcacgcacgccgacgccgggcgcggcctggccgcgcgggagctgatgcagcgcatggcgctgcgcagcaaggcccgcgcagcgcggcggctctcgagctcagcgagcgcgccggtatcccccgggacctacgacaacggcgtccctacgacggagtacctggtgcacttggccatcggcacgccgccgcagcccgtgcagctgacgctcgacaccggcagcgacctcatctggacgcagtgccagccgtgccccgcatgcttcgaccaggctctcccttacttcgacccgtcgacatcctccacgctctcgctgacttcctgcgactccacgctgtgccagggcctgccggttgcgtcgtgcggcagcccaaagttctggccgaaccagacatgcgtatacacgtactcctacggcgacaagtcggtgacgacaggcttcctcgaagtggacaagttcacgttcgtcggcgccggcgcgtccgtgcccggcgtggcgttcggctgcggcctctttaacaacggggttttcaagtccaacgagaccggcatcgccgggttcggccgcggcccactgtccctgccgtcgcagctcaaagtgggcaacttctcccactgcttcaccgccgtaaacggattgaaaccgagcactgtcctgctcgacctgccggccgatctctacaagagtggccgcggcgccgtccagtccacccctctaatccagaatcctgccaatccaactttttactacctctcgctgaagggcatcaccgtcgggtcgacgaggctgccggtgccggagtccgagttcgctctaaagaacgggaccggcggaacgatcatcgactccggcacggccatgacgtcgctgccgacgcgtgtttaccggctcgtccgtgacgcgttcgccgcgcaggtgaagcttcccgtggtgtccggcaacacgacggatccctacttctgtttgtcggcgccgctgcgggcgaaaccgtacgtgccgaagctggtgctgcacttcgagggcgcgacgatggacctgccccgggagaactacgtgttcgaggtcgaggacgcgggcagcagtatcctctgccttgccattattgaaggcggagaggtgaccaccataggcaatttccagcagcagaacatgcacgtactctatgatctgcagaatagcaagctgtccttcgtccctgctcagtgcgacaaactttagtctcgcattgctctgaccataatttgttatagctgaatagtttggatttgagcaactctatgccgtacagacatccatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0318400, RefSeq:Os03g0318400