Os03g0321500

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Revision as of 12:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0321500| Description = Protein of unknown function DUF630 domain containing protein| Version = NM_001056496.1 GI:115452720 GeneID:4332679| ...")
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Gene Name

Os03g0321500

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001056496.1 GI:115452720 GeneID:4332679

Length

6109 bp

Definition

Oryza sativa Japonica Group Os03g0321500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11680114..11686222

Sequence Coding Region

11680440..11681139,11681628..11681851,11682561..11682775,11683075..11683152,11683368..11684682

Expression

GEO Profiles:Os03g0321500

Genome Context

<gbrowseImage1> name=NC_008396:11680114..11686222 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11680114..11686222 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtctacacgatcaaagaatgaagatgacaaggccattgtcttatgccacgaaagaaaacgatatgttagagaagcacttgatggaagatgtgcattcgcagctgctcacttcgcttatattcaatcactgagacacacaggatttgctctgagaaaatttttggagcctgaagtgccaacagattcttcgctgtacacatcgacatctgcaacaccagaacctcctactattcggcagaaatcgaggaacttatctccatctatttcacatcaggccagtgactctttctccccagttccatcccctttatcttccggacggttccgtatcaatcatatgaaatctggggggaaccctgtcatgaccattgaggagaaggtgcctgttcctgtaacagcaactctacaaacatcatcccttgttcctaaagctgtacatgacctggatgatagttccacatttgaagcacctccagggacaccaccgtgggactactttggcctttttaaccctgttgagaaccaattttcatttcatgacgagaaggagcctggtcatgactttgaaaacgctgatgatatcaggcgtcttcgggaaaaggagggaattccagagctcgaagaggaaggggagaagactcctgtgcatcctgacaatgttaggcgcttccgtgatgagaaaacttcagatctcaaagatgcagaaaaatctcctatcaatggaagggaggatgattttgcagagtcagaagatgatttcgataatccatcatctgaacctttagtgagggtgttccagaaccgcaatgatatgcctgttgaaaatactgtgatgaatcagacacctgaacatgtggcttcagaaaagttagcttcagagaatagcgtttctttttctcgaaaacaggagaatagtgattctttttctcgaaaacaggagaatagtgattctttttctcgaaaacaggagaatagtgattcattttctcgaaaacaggagaatagtgattctcaaattgacaggccaaacaatgacaaggaggtgctagacattagcatgtttgaaagtgatgatgaaagccctgtggcaagccctgtaaaagaagtgagatcttccattgctgctcttcctatgaatgggaaatcaaaagaaccttttcatgacgttagaaatggtgcgaaggatttgcattcatgcatgaaagagattgaaatcttgtttattagggcatcagattctggaaaagaagtaccaaggatgcttgaagcagataaagtcaatttccggcctttactgcctgaagaaaaagcacatggatcaaaagcatcaggcttctttgcgacattctttgcttgctgcggtggggaggaaattcctattcctcagcctcctcctgaggctgaagtgaagtaccttacctggcacagatcagtttcttcactctcttcatcatctagaattcctcttggggtgacttcaaaagatgatgctgatggtctcactggaaatatctttagtggtgtatacatgaattctggcagtcacgcttcaacactagatagattatatgcatgggagagaaagctttatgatgaagttaaggctagcggtgcaatttgtaggcaatatgacgaaaaatgtaggcaattgagacaccaggaatcaaaagctgaaagccaaatgagtatcgatagaacccgtgctactgtgaaggatttgcactccagaattatagtggccattcagagaattgacatgatctctaagaacattgaggatctaagggacaaagagcttcaaccacagttggaggaattaattgggagtttaactcgcatgtggtctacaatgcttgagtgtcacaaacatcaacgtgagattattaagtccagcagtggcaacacgaaggtcttaattcggtcggagtcacaatttcaagcagctctactcctccaggttgagctaaacactttatattcaaccttcctgaaatggatagcataccacagatcgtacttgcatagcctaaattcatggctacttaagtgtgtgaaaccactgaggggcaagaagagctccaggaggaagaaggaagcagatactcccataactaaatttgctgttgcacccatgtttaaaacctgtgaaagctggataaagttattggatgatttaccaaccaaggacttggaagatgctatcaaaggcctcgtggcagatataaaccactctgtgcctcgccaagaaaagcggcgtggtacttcaaagttgacttcctcattatcccgttccagtagtaccaagacgatttcctcattttctcggaatggagagttaaatggtgaaatgtcagagatccacagaaattcccatactacggatttacagtcaagtttggagacattcctagaggggtttgcagagttttcagatgtttcactgaagaagtatatggaactcgcggttgacattaacaaagcaaaggaacaatatgagaatgtgaagttaaagaacatgggaaagtga</cdnaseq>

Protein Sequence

<aaseq>MGSTRSKNEDDKAIVLCHERKRYVREALDGRCAFAAAHFAYIQS LRHTGFALRKFLEPEVPTDSSLYTSTSATPEPPTIRQKSRNLSPSISHQASDSFSPVP SPLSSGRFRINHMKSGGNPVMTIEEKVPVPVTATLQTSSLVPKAVHDLDDSSTFEAPP GTPPWDYFGLFNPVENQFSFHDEKEPGHDFENADDIRRLREKEGIPELEEEGEKTPVH PDNVRRFRDEKTSDLKDAEKSPINGREDDFAESEDDFDNPSSEPLVRVFQNRNDMPVE NTVMNQTPEHVASEKLASENSVSFSRKQENSDSFSRKQENSDSFSRKQENSDSFSRKQ ENSDSQIDRPNNDKEVLDISMFESDDESPVASPVKEVRSSIAALPMNGKSKEPFHDVR NGAKDLHSCMKEIEILFIRASDSGKEVPRMLEADKVNFRPLLPEEKAHGSKASGFFAT FFACCGGEEIPIPQPPPEAEVKYLTWHRSVSSLSSSSRIPLGVTSKDDADGLTGNIFS GVYMNSGSHASTLDRLYAWERKLYDEVKASGAICRQYDEKCRQLRHQESKAESQMSID RTRATVKDLHSRIIVAIQRIDMISKNIEDLRDKELQPQLEELIGSLTRMWSTMLECHK HQREIIKSSSGNTKVLIRSESQFQAALLLQVELNTLYSTFLKWIAYHRSYLHSLNSWL LKCVKPLRGKKSSRRKKEADTPITKFAVAPMFKTCESWIKLLDDLPTKDLEDAIKGLV ADINHSVPRQEKRRGTSKLTSSLSRSSSTKTISSFSRNGELNGEMSEIHRNSHTTDLQ SSLETFLEGFAEFSDVSLKKYMELAVDINKAKEQYENVKLKNMGK</aaseq>

Gene Sequence

<dnaseqindica>5084..5783#4372..4595#3448..3662#3071..3148#1541..2855#accgcaccgcaccgctccgctgctgctgctgctgctgctcatcatctctccgaagcttctcatctcctctccactcctcctcctcctcctccccctcgccacctcccacgcgctgccacgccggcgacacgaccactgcctccccccgcgcgggcgcgccaagcgccgggatcccgctgctgcgttccagttcgcggccggggcgtagtaaccacaggtgaggtttccttttgggcggttgcggctgcgttttttttttctctctgagaattgtggtgcgcccccgccctacgcgggggatcggtgaattggatgcgctttgtcttcctgatggccgctgcgagggaaaagtgggatctttttgttgttgttctactgttttgatttttgcggggggggggggggggggggcgttctgtcctgtttgcgtagtgagtagagttcacgctgatggtggtggggaaggggaatggaacggatgagttgccagaattttgggaatcggggggcggttggcattggtctagttgggttagttttacttgcttcgttagctggattgttaaagctccaaacttttcatggctcttctgctcagtttgagcctgtatggtgtagttcaggaggtgtgttttgccgtgggttggttagagaatttgatgagcctggaatcgacgtaatgaatattggtctctcttgctccagaagaactccgaatctgttgccttgatggcacgtgaattttcagttgataaagttggagtttcatcatggatttgtgtggtaacttgcgggataaagtaagtttcagttcgttttagaagttgaatttctctatcctactttatgagagattctaagagttttctcgttttgctctgaatttatctgtatatgaggacttttaggggggggggggggatgaccaatttcttgaaaaacctattgtttaattggagctgttcatttctagttcccaattttcagtaaatgcgttcttagcaagtgattgcttgataccacgatgataccccgcaaatgcatcctctccgtaattcaggatcatatgatgttaaattgttaatcactagttctttcccagtatgtgagttcctttttttgttcttctctgtaaatttagcccttgtttgtgtcacagtctctcagagttctagaattcacactactgataccgaatcttgagcacagtcagtttgactgtttgagcattacgtatgaatctgtttctacaacgatgtatgtaatgataatgatgattgtaatttgtaattgatgcagtatatatagactaacatacagagctgctgatgaaacattagcttatctttcttgccagcttaatcaactctttgataccatctaatagcaaactccactttatataaaatacagacacaaagttacacagttgaccattatttcataccaaaatagcttccccaaatactatcttttatctgcagtgcatgcccgtaactttttgtttcttgtgaatttcagcagtgcaatacaccttaaaatggggtctacacgatcaaagaatgaagatgacaaggccattgtcttatgccacgaaagaaaacgatatgttagagaagcacttgatggaagatgtgcattcgcagctgctcacttcgcttatattcaatcactgagacacacaggatttgctctgagaaaatttttggagcctgaagtgccaacagattcttcgctgtacacatcgacatctgcaacaccagaacctcctactattcggcagaaatcgaggaacttatctccatctatttcacatcaggccagtgactctttctccccagttccatcccctttatcttccggacggttccgtatcaatcatatgaaatctggggggaaccctgtcatgaccattgaggagaaggtgcctgttcctgtaacagcaactctacaaacatcatcccttgttcctaaagctgtacatgacctggatgatagttccacatttgaagcacctccagggacaccaccgtgggactactttggcctttttaaccctgttgagaaccaattttcatttcatgacgagaaggagcctggtcatgactttgaaaacgctgatgatatcaggcgtcttcgggaaaaggagggaattccagagctcgaagaggaaggggagaagactcctgtgcatcctgacaatgttaggcgcttccgtgatgagaaaacttcagatctcaaagatgcagaaaaatctcctatcaatggaagggaggatgattttgcagagtcagaagatgatttcgataatccatcatctgaacctttagtgagggtgttccagaaccgcaatgatatgcctgttgaaaatactgtgatgaatcagacacctgaacatgtggcttcagaaaagttagcttcagagaatagcgtttctttttctcgaaaacaggagaatagtgattctttttctcgaaaacaggagaatagtgattctttttctcgaaaacaggagaatagtgattcattttctcgaaaacaggagaatagtgattctcaaattgacaggccaaacaatgacaaggaggtgctagacattagcatgtttgaaagtgatgatgaaagccctgtggcaagccctgtaaaagaagtgagatcttccattgctgctcttcctatgaatgggaaatcaaaagaaccttttcatgacgttagaaatggtgcgaaggatttgcattcatgcatgaaagagattgaaatcttgtttattagggcatcagattctggaaaagaagtaccaaggatgcttgaagcagataaagtcaatttccggcctttactgcctgaagaaaaaggttaggtatcaataaaattaaattactgttctgtagtatcttatttggaaattgcatggaaaataatggcagaaagattttgggatgcaaaaatatcatgatgtgaaaattttcatgattcttttcaatgttatccatctatagaatatcttttgcctgtgatttttatcatggacaattctgtctttactaattttattgcaattttggtgcagcacatggatcaaaagcatcaggcttctttgcgacattctttgcttgctgcggtggggaggaaattcctattcctcagcgtaagtttttatatctgaaatacagtctttccgcagcagattatgttgctgtgtatagttttgcatcatatcatgtttgtttcatgccgtttattcctggatctctggttaaaagatttgttttttccacaaatggaaaaattctatgttatctacaagctgatatgtactttccacattctcacacgagcaattttgacagaatcttaattattttgtcttttaccttgtattatatatgttacagctttttttctcccttccaccataacaagaggtgcccttttgtcataatgcagctcctcctgaggctgaagtgaagtaccttacctggcacagatcagtttcttcactctcttcatcatctagaattcctcttggggtgacttcaaaagatgatgctgatggtctcactggaaatatctttagtggtgtatacatgaattctggcagtcacgcttcaacactagatagattatatgcatgggagagaaagctttatgatgaagttaaggtacttgtattttggctggtcttgttactaaaatatttactttagtttatctgttctagccagtttttgaaatattgtaaagtagagaggtagcaatgaagtgttttaggattgaaactagccttctttttttttctttttttttttgcaaaaagggaaataagatcgattttgaactaattaaaacagaacctacctagaacatgtaataaataggaactagccttttttttttttttgcaaaaagggaaataagatcgattttgaactaattaaaacagaacctacctagaatatgtaataaatgggacatacgaaaacctgaatgtatttgatagaaggattgcgactcactatatacaacatggcaattgcacaaagtgctactgtaatcattccacagcaaccactcaggctatttaggacaattatgtaagtagtgtgagccagttacattattttcttatgtacctacgtaatacagccataaaaaaattcactaccgatgcccacttatatgttcattttgcactttttattcctattcccttcacttaattcctttgtactaatgttcttgaataaataagctatatccgtgtatgtttgccttaatctgtgaatttctatgttgtaaacatagttaaatcatataatgatggcaaatttgatgatttgtttgaaatgctaacctttatattgtcttcaggctagcggtgcaatttgtaggcaatatgacgaaaaatgtaggcaattgagacaccaggaatcaaaagctgaaagccaaatgagtatcgatagaacccgtgctactgtgaaggatttgcactccagaattatagtggccattcagagaattgacatgatctctaagaacattgaggatctaagggacaaagagcttcaaccacagttggaggaattaattgggaggtatggttcaccatctatgttttactatactgttttctagtgacatgttacaattcaatgaacactttaatgtcgatgtcagcatatttgaccagcctgatcaaggcccctttcaacaccttaggtcaagttattagtagatttactcctggttttggattatgggttttgaccataacttgcttggtcgaacaaccgccaggtgtatgaatgaaacaaagggccaacttgccctggtcctgtttttgctctagtctacattaacagaagataaatggataaggtagtacttaccattgcatgttgcttggggatgatttattcctacctccagcattgcccaagtttcataaagttgtttgtgagctttgtagaatataataaagcaatttgatgctcatgtactgcatgttacctttgtctagttatttactgatagttttccaatatttgcattttaatagatagtatatacatctcatttgcagtttaactcgcatgtggtctacaatgcttgagtgtcacaaacatcaacgtgagattattaagtccagcagtggcaacacgaaggtcttaattcggtcggagtcacaatttcaagcagctctactcctccaggttgagctaaacactttatattcaaccttcctgaaatggatagcataccacagatcgtacttgcatagcctaaattcatggctacttaagtgtgtgaaaccactgaggggcaagaagagctccaggaggaagaaggaagcagatactcccataactaaatttgctgttgcacccatgtttaaaacctgtgaaagctggataaagttattggatgatttaccaaccaaggacttggaagatgctatcaaaggcctcgtggcagatataaaccactctgtgcctcgccaagaaaagcggcgtggtacttcaaagttgacttcctcattatcccgttccagtagtaccaagacgatttcctcattttctcggaatggagagttaaatggtgaaatgtcagagatccacagaaattcccatactacggatttacagtcaagtttggagacattcctagaggggtttgcagagttttcagatgtttcactgaagaagtatatggaactcgcggttgacattaacaaagcaaaggaacaatatgagaatgtgaagttaaagaacatgggaaagtgaataagttcgacaaagtcagaccaaaggaactaatttctggaaggaagaatgggctacaataactcaaagccatttagaagtggataagtggatcacccatgtgtatattagcctgtttaaacaataggtataaattactgttacttttctttttgggttcagtttgcaagataggtttaggtgggagaggaatacttgtagatttctggccaatgccatgccgcagaagtgtaaatctgaggtttaggtaaaattaaactgatggtgggggatacaatatgtgtatttatcctgggtatatcattatatgagttttcccttttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0321500, RefSeq:Os03g0321500