Os03g0328100

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0328100| Description = Similar to Axi 1 (Auxin-independent growth promoter)-like protein| Version = NM_001056534.1 GI:115452796 GeneID:43327...")
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Gene Name

Os03g0328100

Description

Similar to Axi 1 (Auxin-independent growth promoter)-like protein

Version

NM_001056534.1 GI:115452796 GeneID:4332719

Length

4314 bp

Definition

Oryza sativa Japonica Group Os03g0328100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12058854..12063167

Sequence Coding Region

12059500..12059761,12060040..12060197,12060276..12060480,12060572..12060861,12061314..12061467
,12061568..12061656,12061741..12061808,12062857..12063127

Expression

GEO Profiles:Os03g0328100

Genome Context

<gbrowseImage1> name=NC_008396:12058854..12063167 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12058854..12063167 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaggcacaagagctcgccgccggcgatccgccgccgcggggtcggcatgctccggtgggcggtgcgcgtcgcctcgagcatcgtgctctggacggccctcctccatttatccagcctcctcggcctcccccgcccgccgctcctcgccgcccggccctcctgcctaggcggcggcggcggcagcaactccagcgcctcctctgctgtaaccgtcgctgccgccgacgaggtcgggcgcctcgcgcccccggctgtgcctcgcaggagggtttataagagtaatggttatcttcttatttcatgcaatggtggtctgaaccaaatgcgagctgcgatatgtgacatggtaactgtagcacgctatatgaacctgactatggtggtacctgaacttgataagcagtccttctgggctgatcctagtgattttggagatatttttgatgtaaaccacttcatcaattctttacaagatgaagtaaagatcatcagggaactgccacagaaattcagcaggaaagttccattctcaatgcagccaatcagctggtctagcgagaagtactatttgagacagatcttgcctctagtacggaagcataaggtggtacgttttagcaggacagattctcgccttgcaaataatggccttcctttaaagctccaaaagcttcgttgccgtgttaactacaatgcactacaatttgcaccatcaattgaggctcttggcaaaaagatgatatcagctcttaggaaaactggatcttttattgtgcttcatctgagatacgagatggatatgcttgcattctctggttgtacacatggatgttctgacgaagaaacagcagagctcacgagaatgaggtatgcgtacccttggtggaaagaaaaagaaatagattctgaaaagaaaaggctcgaaggattatgccccctaacacccggagaaacaacattagtactcaaagctcttggtttccccagggacactcggatatatattgcctcgggtgaaatctatggtggtgaaaaaagattaactgaactgaagacagaattccctaacattattcggaaggagatgcttttatctgctgatgagttacgccccttccagaagcattcgactcaaatggcagccctggactatcttgtgtctattgctagtgatgtttttatccccagtaatgacggaaacatggctaaggttgtagaaggacatcgcaggtttatgggctttcacaaaaccatacagcttgataggaaaaagctagttgagcttatagatcttcttgaagatcaggagctgtcctgggacgaattctctactgctgtgaaggagctacacgagggccgaatgagcgaacccaccagaaggaaagctattgccgggcagccaaaggaagaggactacttctatgctaatccacatgaatgtcttggagctgcgagaaagcgaagggagaagctaaaacatactgagatatga</cdnaseq>

Protein Sequence

<aaseq>MARHKSSPPAIRRRGVGMLRWAVRVASSIVLWTALLHLSSLLGL PRPPLLAARPSCLGGGGGSNSSASSAVTVAAADEVGRLAPPAVPRRRVYKSNGYLLIS CNGGLNQMRAAICDMVTVARYMNLTMVVPELDKQSFWADPSDFGDIFDVNHFINSLQD EVKIIRELPQKFSRKVPFSMQPISWSSEKYYLRQILPLVRKHKVVRFSRTDSRLANNG LPLKLQKLRCRVNYNALQFAPSIEALGKKMISALRKTGSFIVLHLRYEMDMLAFSGCT HGCSDEETAELTRMRYAYPWWKEKEIDSEKKRLEGLCPLTPGETTLVLKALGFPRDTR IYIASGEIYGGEKRLTELKTEFPNIIRKEMLLSADELRPFQKHSTQMAALDYLVSIAS DVFIPSNDGNMAKVVEGHRRFMGFHKTIQLDRKKLVELIDLLEDQELSWDEFSTAVKE LHEGRMSEPTRRKAIAGQPKEEDYFYANPHECLGAARKRREKLKHTEI</aaseq>

Gene Sequence

<dnaseqindica>3407..3668#2971..3128#2688..2892#2307..2596#1701..1854#1512..1600#1360..1427#41..311#aaagcgtagcttataccagtagcagtaggaagaaggcgccatggccaggcacaagagctcgccgccggcgatccgccgccgcggggtcggcatgctccggtgggcggtgcgcgtcgcctcgagcatcgtgctctggacggccctcctccatttatccagcctcctcggcctcccccgcccgccgctcctcgccgcccggccctcctgcctaggcggcggcggcggcagcaactccagcgcctcctctgctgtaaccgtcgctgccgccgacgaggtcgggcgcctcgcgcccccggctgtgcctcgcaggagtgagtggttcttgtcttgttgatctcgctgctgtgggcggctgggcggttcttggttcttggaatcatgacctccttgctcgggtcttggttggggttcttgggtaaggcgcttcccactatctgaatggatggagtggaatgtggaagctctcgagcattcatgagttggatcgaactgttccaggaagtaactgaataagcttagctaaactgagtcattggttgtggtcttgtggatcgttaaactggtgttgttcggggatttgggtcttgacagacttgcgactgaattatttttgctcgcagcgcctgttcttggttctgggtgtttgagttcttgatttaccgtttagtttgtgctaccgattttagtttgtttatcgaaaacggagttccacggtttgttgtgatggattttgtgctatggattttggttctctgaagctagtgatacgttaacgttatgtcagaatttgagatcttcacatgttggaacttggaacctggaagctgtaagccgtaactgattagcaaaacctggaatgtgcttcacttttagcagtagtagtatataaagattgctctcttcattaattattccttgttaaatcatgtgacacagggatttgcatccttcatagaacaaaatgataaatgtgtttcctgaaaaaagattcgataaatagttgtatacctggatacactttggaatttttttttccaggatagctgttttggttattttcacatgaagctggaaaatagaaattaggaggtggtttcccttgcaaagtaaaattccaatcaccatgtgggtgataggcttcaaaaagaaataatttctagcttcctttttaccattatatgtaagcgagaggacctgatgcctcaagaatgaagtttgctcgattttacttgaatttaccccatctagcttcacccttggcatatacagcattctggtagcaatatcaacagaacaatacaaagcatgtcttggttttaatgataggttcagtctgataaagtacaatctctcatgcaggggtttataagagtaatggttatcttcttatttcatgcaatggtggtctgaaccaaatgcgagctgcggtagtatctcacaatgcttctgtctacaataaaacctgtgtaattatgttttactaatgttgcagaaatgtttgttttctgcagatatgtgacatggtaactgtagcacgctatatgaacctgactatggtggtacctgaacttgataagcagtccttctgggctgatcctaggtgtgtggttttcccaccagtcccacattctcacttccttcatgattgattttacagttagaatgcactattattgattcaatgtagttatattttccagtgattttggagatatttttgatgtaaaccacttcatcaattctttacaagatgaagtaaagatcatcagggaactgccacagaaattcagcaggaaagttccattctcaatgcagccaatcagctggtctagcgagaagtactatttgagacaggttgatactaatcttcctccaaggcataggtttaggcccccttttattcaaaggaaattcataggaattttaaaggatttcattcctataggaatttttcttatatagccctttgaatcaaagaaatgaatcctatggaatcctatgaaattcctatggaatgcctcttcccatgcaagttttagaggaaatttagcatgaggtagaacctcatgttaagaatccttagtctttatctctcctcaaattcctgtgtttttcctacggctcaatcaaacggtcattcaatgtttttcctgtgttttgtaatcctctgttttacacttgtattcttgtgagaatcctatgtttttcctattcttccgttttttcattcctatgattcaaagggggccttacatttctatgctatccactgcttcttttgacttttttagtgctcttgctttcagatcttgcctctagtacggaagcataaggtggtacgttttagcaggacagattctcgccttgcaaataatggccttcctttaaagctccaaaagcttcgttgccgtgttaactacaatgcactacaatttgcaccatcaattgaggctcttggcaaaaagatgatatcagctcttaggaaaactggatcttttattgtgcttcatctgagatacgagatggatatgcttgcattctctggttgtacacatggatgttctgacgaagaaacagcagagctcacgagaatgaggtttcattcgatattgaacttcataactgtctgcacttacttctcccagactctaatcaatctctactgttatctgctatttggacatcaggtatgcgtacccttggtggaaagaaaaagaaatagattctgaaaagaaaaggctcgaaggattatgccccctaacacccggagaaacaacattagtactcaaagctcttggtttccccagggacactcggatatatattgcctcgggtgaaatctatggtggtgaaaaaagattaactgaactgaagacagaattccctaacattgtaagcacatcataatttaacgcccatgaaaacatatactaatgctagaaagatgcttatccactattgcaattttagattcggaaggagatgcttttatctgctgatgagttacgccccttccagaagcattcgactcaaatggcagccctggactatcttgtgtctattgctagtgatgtttttatccccagtaatgacggaaacatggctaaggttgtagaaggacatcgcaggtctgccacttcgatattccttctgtttgttcttgtttgacttgccattgtgtgtgtattactgcaatatgttaagtatagtaaggagtggaacaaaatgtttattggcgtgcacacttacatctgcactgtgtcctgtcacaaggttataggtgttcctttttttgtccgagaaatggtatatgtttgcttttaagaatcatcacaatagtgagaaagactagtttagaagaacaccaccactaggttaactgcaaatgtttatgttggaaatgcaggtttatgggctttcacaaaaccatacagcttgataggaaaaagctagttgagcttatagatcttcttgaagatcaggagctgtcctgggacgaattctctactgctgtgaaggagctacacgagggccgaatgagcgaacccaccagaaggaaagctattgccgggcagccaaaggaagaggactacttctatgctaatccacatgaatgtcttggagctgcgagaaagcgaagggagaagctaaaacatactgagatatgaaagctgcctggtaggctgcaggtacataggagaccaaagtgaattgcggtaaagcagtatcaattcaatgtcattctaatagtctgatcagctgatttcaggaaatgcaaaacaaacttcctcatttaactgtcaaggctcatatttttgctgagccacaccccagttagtgtgaataagtagtagcacttgtctgccttcgaaagctgatcgttctgacgcaaatcgaagcaaacattcttctgaagatccacgtggtacgtggagtggcttatgtcatccagaaacagagaacttgaagagcatcattggtcgttaatacttgctgattctgtattcattttccctgtaggttagttccctttgacatattaactgtagatgtaatgttgttcttgattttctgtgtaggtggtatagtgtcagatgccatgttgtgtcggttgtatttgctgttgaagacttgaagtacgtatttagtgtggaaaatgcaatgttaaactgttgatggacctattgtattgatgtagactaatagtatatacattgacctggtaatctccccatgcattgcatgaaacatcgttgagcactggtacattatatgaccatcattgattttttgtattttcaagcaatattttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0328100, RefSeq:Os03g0328100