Os03g0330000

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0330000| Description = Glycosyl transferase, family 8 protein| Version = NM_001056542.1 GI:115452812 GeneID:4332727| Length = 5235 bp| Def...")
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Gene Name

Os03g0330000

Description

Glycosyl transferase, family 8 protein

Version

NM_001056542.1 GI:115452812 GeneID:4332727

Length

5235 bp

Definition

Oryza sativa Japonica Group Os03g0330000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12184135..12189369

Sequence Coding Region

12184701..12184985,12185164..12185706,12185792..12186149,12186471..12186769,12186891..12186964
,12187405..12187492,12188348..12188449,12188588..12188616,12188893..12189010

Expression

GEO Profiles:Os03g0330000

Genome Context

<gbrowseImage1> name=NC_008396:12184135..12189369 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12184135..12189369 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggcgacgcccccgccggcgaagaggcggaggggcccgcggctggcggtgctggcgctcgtcttctgctcgctgctcgtgccgatcgccttcctcttcaaccgcttccctgccgtgtatgtgacggatgagcgcccccaacaggagattgatttgccttcattcggacgcatggggttggaaaggagcggtggagtaaccgtagtgaagccggaagatggcagtggtgctaacgcagagacaaaggatacacctgagatgattcacaggggcggtataaactcacatcaccatagtgataatgtcccttccaaagttagtgctaacccaaaagtcccccctccaccaaaaattgaaccactgaagccaaaggcaaagtcagtaccagttccagttcaacgtacagaagttattagtggcaataacatgaaacctgccaaagttcaaaatgcggacgatgtggaaaaggctaaggcttgtcagcttgaatttgggagttactgcctctggtccatagagcacaaagaagttatgaaagacaccattgtgaaaagactaaaagatcagctatttgtagctcgctcgtactacccaagcattgccaaactaaaaggaaaggaggcactgactcgtgggttgaagcaaaatattcaagaacatgagagggttctcagtgagtccattgttgatgctgatctaccatcgtttatcaaaagcaagatagagaagatggaccaaacaataggaagagctaaagcatgcactgttgattgtagcaacgtcgacagaaagcttcgccaaatacttcatatgacagaggatgaagctcattttcatatgaagcagagtgcatatctgtacaatcttggtgttcacacgatgcccaaaagtcatcattgccttaacatgaggttgacggtagaatattttaagtccgctccattggattcagatgactctgctgtgcataagtttaatgttccagaccataggcactatgtcatattatctaaaaatgtacttgcagcttctgttgtcatcaactcaactgttagtaattctgaggagaccgaaaatgtagtatttcatatattaactgacgctcaaaatttctatgccatgaagcactggtttggaaggaactcctacagggagtcagctgttcatgtcataaactatgagcatattattttggagaatttgcccgagttcagctcccagcaattatatttacccgaagaatttcgtgttttcatcagtaatcttgaacgacctagtgagaaaaccagaatggaatatttatcagtgttcagtcactcacatttcttcatcccagaaatattaaaagatttaaagaaggtgattgtgttggatgatgatgtggttgttcaacgtgatctctctttcttgtggaatattgatatgggagataaggtcaatggtgctgtcaagttttgtggtctgagaatgggacaactaagaaaccttctgggtaaagcaacatatgatccgcagtcgtgtgcttggatgtctggggtgaatgtgattgatttggagaaatggagggagcataatgtcacagagaattaccttcaactactgaaaaagttccaacacaatgatgatgaagcttcagtgcgagctgcagctttgccaataagcttgcttgcctttgaacatcttatatatcctctcgatgaaagattgactatatctgggcttggatatgactatgccatcaaagaggaacttgtccggaattctgtatcattgcattataacggtaatatgaagccttggcttgagttaggtataccggactacaggaagtactggaagaggtttcttacacgagatgaacgattcatggatgagtgcaatgtaagtccataa</cdnaseq>

Protein Sequence

<aaseq>MKATPPPAKRRRGPRLAVLALVFCSLLVPIAFLFNRFPAVYVTD ERPQQEIDLPSFGRMGLERSGGVTVVKPEDGSGANAETKDTPEMIHRGGINSHHHSDN VPSKVSANPKVPPPPKIEPLKPKAKSVPVPVQRTEVISGNNMKPAKVQNADDVEKAKA CQLEFGSYCLWSIEHKEVMKDTIVKRLKDQLFVARSYYPSIAKLKGKEALTRGLKQNI QEHERVLSESIVDADLPSFIKSKIEKMDQTIGRAKACTVDCSNVDRKLRQILHMTEDE AHFHMKQSAYLYNLGVHTMPKSHHCLNMRLTVEYFKSAPLDSDDSAVHKFNVPDHRHY VILSKNVLAASVVINSTVSNSEETENVVFHILTDAQNFYAMKHWFGRNSYRESAVHVI NYEHIILENLPEFSSQQLYLPEEFRVFISNLERPSEKTRMEYLSVFSHSHFFIPEILK DLKKVIVLDDDVVVQRDLSFLWNIDMGDKVNGAVKFCGLRMGQLRNLLGKATYDPQSC AWMSGVNVIDLEKWREHNVTENYLQLLKKFQHNDDEASVRAAALPISLLAFEHLIYPL DERLTISGLGYDYAIKEELVRNSVSLHYNGNMKPWLELGIPDYRKYWKRFLTRDERFM DECNVSP</aaseq>

Gene Sequence

<dnaseqindica>4385..4669#3664..4206#3221..3578#2601..2899#2406..2479#1878..1965#921..1022#754..782#360..477#gccaaagcaaaaatcctctcccatcttccatctctctttccctaggacgcgcagcgctgtttattcctctccgctccccttgcttctcgcgcacactaaccaatccgagcatctcgcctcgccccgccccgccccgatcgatcgactcgagcgccaccccacgccgccgcccccgcgccattggccccagccgccgggaggcattcgtctgcgctgccccgcggcggtggcggtgacggtggaggtggaggcggtgtggcatgatcgatagaggagtcgggagaggcggcggaggaggagggggaggaagaggcggtggagatcgctaggagtggtggtggtggtgggaggaggaggcgatgaaggcgacgcccccgccggcgaagaggcggaggggcccgcggctggcggtgctggcgctcgtcttctgctcgctgctcgtgccgatcgccttcctcttcaaccgcttccctgccggtgagttctccgcggccgacacgttcgcccccacccctcgcgacgcgacgcggctcgagcccccccggattcgggggaatgcgggtgccgccgcggcctcccccccgatcggatcggcgccgttcccggcggatctgttccgggggctcgctggttccttccttgtcgtttagtgtgcgggatattgggttgttttggtggtattcctgttctcttattggggattgtgttttttgggggtcagttttctgattggtttggatgtttctgatgcagtgtatgtgacggatgagcgcccccaacaggtaacttgttgtttctagaaatgtgcatattgaactagtttttgatagtcttgtgtggatgttttcttacgaaaatgctgtttgtttgggacaatatgtgtcactcattgctattttggtgatttgtgtttggtacaggagattgatttgccttcattcggacgcatggggttggaaaggagcggtggagtaaccgtagtgaagccggaagatggcagtggtgctaacgcagagacaaaggttagtgattttctgtgatctttttgttacgtagtgatagtgattaatccgtacggcattgtgccttgtgctagcttggtggattttgacatagtcatgcaatgtaaaactctgacatgatcatgttgacgaaggttagtagcttggcctttgtattgcattttcacctctatggagaaggacaaaacatgaataaccattaaactaataacattagcattttatttttcataggctggacatgtcgttgtatccctcattcctcctaacgtggtttagattcttggttggttactgggttttaataaaaactacctggtttaggtgcatttgcattcaaatgtatttttgttcttttaaaatttgtatggcatggtagataaaacaactggccataacacaactgagtttacgactggagagcatatcaagacagaccatgtcaaattgaacttatccagtgaaacgggttttttgtcagcttttggagaatttggcgaactagtcataatgccgtagactgcactgcttctatactatttctcttggactgagtatgacaactgagatatggcatgctaacacgatttgagccacaaaatccaactgctacgaactacccccgacatagccaatgagcaaagcaatattgcatatcaatagtacctccctctattctagtctctttgttcatgattatgaactgcgaaggatctggaagatctatgcctgcagaaatatagaattagtaattaatttgcttcttttgttcttaataaatactgcattccataacagctccatatgtattgtaaaatcccttattcctcacacccttttctcttcctttttcaggatacacctgagatgattcacaggggcggtataaactcacatcaccatagtgataatgtcccttccaaagttagtgctaacccaaaaggtattggttataagattagaaatattataaattagactcagttgtatatatgtcaaaactattaaaaaaatacaggaagtgccatttgggcaatttaatgtacaactttgaagaaaagaagcatagattgtttttcaattttgtaggaaaatgtttatttggataatattaaaaaacaatgcagttatacatcattttggggctattgaggatgaagaccagttactattcaatatcccaacacctgcagtttactagttttaatatttacattcatgtatagtgtggcaagatggtgacttctattcataaatggtgttttgtgtgctcaagctgtgtatgagtagtccatctattctattctattttttttgttcccttagtaaactcatattttatttgactgtcttattgactcaataattggcacctgtctgcagtcccccctccaccaaaaattgaaccactgaagccaaaggcaaagtcagtaccagttccagttcaacgtacagaagtatggctcttggctagttgcagttacatctatgaccttaggctaggttgtaatttggttgtcgtttttaatgagaaatgtgctgatacattttgtttgaataaacatttactggtttcaggttattagtggcaataacatgaaacctgccaaagttcaaaatgcggacgatgtggaaaaggctaaggcttgtcagcttgaatttgggagttactgcctctggtccatagagcacaaagaagttatgaaagacaccattgtgaaaagactaaaagatcagctatttgtagctcgctcgtactacccaagcattgccaaactaaaaggaaaggaggcactgactcgtgggttgaagcaaaatattcaagaacatgagagggttctcagtgagtccattgttgatgctgatctaccatcgttgtaagtacctagcatgcatattgtgattgcccccttcaatgctttcagggtccatcttttgagttaaaactgtgaaaactaaaacatcctcttttgtgtgggggtggtaactagatcatctatgtactgcatagattcttctgcaagcaaaagaattgaaaatccatgtcttttatatcttaatccagcactcatgtgtcaaaattttcttttaacatttctatgttttctgagttgtaaatgttgaacttgcaccttggtagcttgacagaaatttcagtctggttctcttagtaattaacacttaaattgtgctttcagtatcaaaagcaagatagagaagatggaccaaacaataggaagagctaaagcatgcactgttgattgtagcaacgtcgacagaaagcttcgccaaatacttcatatgacagaggatgaagctcattttcatatgaagcagagtgcatatctgtacaatcttggtgttcacacgatgcccaaaagtcatcattgccttaacatgaggttgacggtagaatattttaagtccgctccattggattcagatgactctgctgtgcataagtttaatgttccagaccataggcactatgtcatattatctaaaaatgtacttgcagcttctgttgtcatcaactcaactgttagtaattctgaggtatgcaaccaaattttaacacattcaagttggtagaatctgctctacacttgccatttctgattttctttttgtgattttgcaggagaccgaaaatgtagtatttcatatattaactgacgctcaaaatttctatgccatgaagcactggtttggaaggaactcctacagggagtcagctgttcatgtcataaactatgagcatattattttggagaatttgcccgagttcagctcccagcaattatatttacccgaagaatttcgtgttttcatcagtaatcttgaacgacctagtgagaaaaccagaatggaatatttatcagtgttcagtcactcacatttcttcatcccagaaatattaaaagatttaaagaaggtgattgtgttggatgatgatgtggttgttcaacgtgatctctctttcttgtggaatattgatatgggagataaggtcaatggtgctgtcaagttttgtggtctgagaatgggacaactaagaaaccttctgggtaaagcaacatatgatccgcagtcgtgtgcttggatgtctggggtgaatgtgattgatttggagaaatggagggagcataatgtcacagagaattaccttcaactactgaaaaaggtcagtcctctgtttaaaattcaaaaacataatagtgtgcttagtaattctgttccatggggccacaaatttgctaattatatgggatcatgacttgctatggtcgttgaaatgaactgctcaaacttttctctgagaatgtattgttagcttatttagtaatcttattttgttacagttccaacacaatgatgatgaagcttcagtgcgagctgcagctttgccaataagcttgcttgcctttgaacatcttatatatcctctcgatgaaagattgactatatctgggcttggatatgactatgccatcaaagaggaacttgtccggaattctgtatcattgcattataacggtaatatgaagccttggcttgagttaggtataccggactacaggaagtactggaagaggtttcttacacgagatgaacgattcatggatgagtgcaatgtaagtccataatgcacttaaacctgggaaacaaaatatctgacggtagattgctacgtctgctgctgtattatatacctagaggggacgagcacttccattgaggaaaaatggggccaggaaagcagttattagccatcaattttgacagagtagatccagcaccatctgttcattgaattagtgagcttgatggatggtttttctacagttagagaaattagtcttaagctgaaggataatgcagtagacaatgatgatgagtgttagtgaggcttcaggtaaagggagcatcactctcaccttctagagtacgggacagaacgatcgatcggtggtgggctgtggcacctttattcaaattggtaccttgcgcctcatcgatgcaggttaattcttttctttgttgaatttttttgacccccttgttttgtcctgtcaataagggcatacacaggctaaattcaaattctttgttcttagttgcacattgattgttcatcatttttgtgtcggtggaaagtatattttgttgtcagaaaaccatcagttacacaacgagattgacagctgtttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0330000, RefSeq:Os03g0330000