Os03g0330300
| Gene Name |
Os03g0330300 |
|---|---|
| Description |
Viral attachment protein, fibre shaft repeat containing protein |
| Version |
NM_001056544.1 GI:115452816 GeneID:4332729 |
| Length |
5572 bp |
| Definition |
Oryza sativa Japonica Group Os03g0330300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:12201822..12207393 |
| Sequence Coding Region |
12202168..12202235,12202332..12202412,12202775..12205221,12205514..12205666,12205748..12205782 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:12201822..12207393 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:12201822..12207393 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagggggcggttgctagcaatgtggagcttgattctgcagtcttccaagtatcctcagcccagaacagatacgaggcaattgcttgcagtaaagggaatacagaattgattgcatctggtccttttgatcaattagtcctgcacttggaagatgctaggaagttccaatcgtgttcaacagctggcacttttaagctgtcgttgtctgggaatgcaaaaggatcttcctggttcacaaaatccaccatagcacggttcctgaataccataaattcaccagatgcctcaaaatctgcaaatggaattttacatgaaatctcacaactggaggaaactagaaagtttcatcaatctctctattctaaggaacaacgaaatcctatgggtggtgctttatccggaggtgtctttggtaccattggcgtagaacaacagggaaatgttggcccaaactcatctgaagcaacaaagaatgaattgcttcgagctctggatttgaggttgactgtactgaaagaggagatctttgcgttgttgaatagagcagtcgtttccaatatgtcaactagagatgtatctgatttatcctcatttgttcagcacttcggtgcatcagagttcagctggttgatgcggtgcctactgttgatcccagactgccaaccctctgaggtctcccaacagcagtctttccctgccgagaaagatgacaagggagaaaatgcacttcatactcgtaatatcagctctcataccattatccagaggcctattaccaacaatgtttccccagcaaagcttgctcaaattgagcgtgaaagctcaactgaaagtgatgattcttctgagtccagtgctgaagatgaggctgtcgttgaaagaagccggccactcatgaggtctgcttcacctaggagatctgcttctccaatgcgaagggttcaaattggtagatcaggatctcgtaggtcaacagcgattgccatcaagagtctcagctatttcccccctagtcaaagaattcctttggataaagatgatgaaagtggcagttgcaatggtgaaactgaccagccttcaaggaaatctgacaataatgtaagaaggatgagtgtgcaggatgcaataaatctcttcgaaagcaagcagaaggatcagaatccggattcgcaaaataagaaagctggcttgtttgctacaaagtcagtactaagaaggtggagtgcaggaatgggtgattccttgaacaataattcagaagaaaaaaccatagattccacatcccaaagtaaatccaacaatacaggatccgattcagagaaggatggagctgaaacacaggctgagccaggttcagcttcagcttctaacactgttgttacgccttctgttgaaggttttcacactaatatgcaaggtgttgcaatgccagaaacagagacagcggtttcatcccatactgaaatttctgctgagcagacaaagtcagggcaagaggaaaacagtgatcgggcaatggcctctgctgagtggaaccgccagaaggaagctgagcttaatcagatgttaatgaaaatgatgcaagtcatgcctggaaagttttcgagtgctaatgtcaccactactggcatcacttccacaaatgagaagaaaggtggactgcaaggtcagcataaagagaagcgagactcgaaagttcgaaccgataaaggtggaaggcggccagcaaaggaggcaagcactaggcccttgaaggaaacagttgggcagaagaaggcagcaattacccccaaaactggcactgcagctgagaaacgcaattctccagttccacaaagggcacggagaaattcatcacctccggtcctaccaaaagaattgaccccaaaagcgcctgccagaaagagctcacccaaaccatcacctgcacctgtgacccgcagttcatggtcaggtggatctttgactaaagcaactactgcacagaaaactaaaagctctcctgggacagtttcagcaccgacagcaactagtcggagaaggactccagtagcaccctcatcttctcaaccaacttcaaaggtggaaagaagtgctcaaccggtgaagaacaaaaaggaaacagttgctgcttcaaagccagcaattaagggaattgaagaaaagaagactaaaacagcaacaaagacaagcaggctagctaaaagtacacctatttcagatgaaaaatcaagtgcagcaactaggccaaacttgtataacaaggttgcaaagaagagcagtgttgtaccgctagaatcaaaaccatcaaagaaagctactgggattagtcaaagtgctggtactgatgctgtgaagagtaagatgccacaacttgatgactcttccaatgacattggaaatattacccaagctgaagataaggagcactctgctgtgacaacccagccaaaaactactaaggtattggaggctgatcttgctcaaccagcacatgatgttgatgaaaatttagaaatttcgctcgataatgacttaaatattgaaaaaacagaaaattcggccccaagtttagctacaacagaaatggactccagtgaacaggttgaacctcacactgaggttcaaccacctcctgaagaggacatgggcatctcatcagctgcctgggtagaggtagagcatgaagaagttactgatgtgggtgaaaatgtagtgcctgaggatgtcacctcaccatcaattgagcccttgccatcttcaagccctagaatccgtcactcattgtcacaaatgctgcaagcagatagcaatgagccggaaattattgagtggggaaatgctgaaaacccacctgcaatagtttttcataaagattctccaaagggattaaagaggcttctaaagtttgcgcgtaaaaataaaggagacagcaacagtaatggttgggcgagcccatctgttgtttctgaaggagaagatgaacttgaagaaccacgaggtggtaatgaaggtgtaaattcgagcaggagaacatttgatggccccaagactaacagcatcttatcagctcaatcaaccaccggcagcttcaactcaacgaattcagacaggttacgggataggcctggagctgccccatcaactaaatcgtcaaggtcgttcttctccctatcaaacttccggagcagcagatcaaacgagtcgaagctcagatag</cdnaseq> |
| Protein Sequence |
<aaseq>MEGAVASNVELDSAVFQVSSAQNRYEAIACSKGNTELIASGPFD QLVLHLEDARKFQSCSTAGTFKLSLSGNAKGSSWFTKSTIARFLNTINSPDASKSANG ILHEISQLEETRKFHQSLYSKEQRNPMGGALSGGVFGTIGVEQQGNVGPNSSEATKNE LLRALDLRLTVLKEEIFALLNRAVVSNMSTRDVSDLSSFVQHFGASEFSWLMRCLLLI PDCQPSEVSQQQSFPAEKDDKGENALHTRNISSHTIIQRPITNNVSPAKLAQIERESS TESDDSSESSAEDEAVVERSRPLMRSASPRRSASPMRRVQIGRSGSRRSTAIAIKSLS YFPPSQRIPLDKDDESGSCNGETDQPSRKSDNNVRRMSVQDAINLFESKQKDQNPDSQ NKKAGLFATKSVLRRWSAGMGDSLNNNSEEKTIDSTSQSKSNNTGSDSEKDGAETQAE PGSASASNTVVTPSVEGFHTNMQGVAMPETETAVSSHTEISAEQTKSGQEENSDRAMA SAEWNRQKEAELNQMLMKMMQVMPGKFSSANVTTTGITSTNEKKGGLQGQHKEKRDSK VRTDKGGRRPAKEASTRPLKETVGQKKAAITPKTGTAAEKRNSPVPQRARRNSSPPVL PKELTPKAPARKSSPKPSPAPVTRSSWSGGSLTKATTAQKTKSSPGTVSAPTATSRRR TPVAPSSSQPTSKVERSAQPVKNKKETVAASKPAIKGIEEKKTKTATKTSRLAKSTPI SDEKSSAATRPNLYNKVAKKSSVVPLESKPSKKATGISQSAGTDAVKSKMPQLDDSSN DIGNITQAEDKEHSAVTTQPKTTKVLEADLAQPAHDVDENLEISLDNDLNIEKTENSA PSLATTEMDSSEQVEPHTEVQPPPEEDMGISSAAWVEVEHEEVTDVGENVVPEDVTSP SIEPLPSSSPRIRHSLSQMLQADSNEPEIIEWGNAENPPAIVFHKDSPKGLKRLLKFA RKNKGDSNSNGWASPSVVSEGEDELEEPRGGNEGVNSSRRTFDGPKTNSILSAQSTTG SFNSTNSDRLRDRPGAAPSTKSSRSFFSLSNFRSSRSNESKLR</aaseq> |
| Gene Sequence |
<dnaseqindica>5159..5226#4982..5062#2173..4619#1728..1880#1612..1646#1485..1519#855..888#644..755#381..566#44..114#ttgagcaattagtccgttgtcagggttgtaacttgtaagcaacatggagggggcggttgctagcaatgtggagcttgattctgcagtcttccaagtatcctcagcccagaacaggtgattcttgctaagatattttttggctatagctgtttaatgttcctatctgtttctccaagaattgggctcaacaaatttacatacgatgcattttattcctctcctctataatggactttccgttttcctttctgcgttaggtttgaaatgggaattttgtacatgatgtgctgatgattgctcaagtcttttgtgattcacaatttcctttaatgaaaatatgaacctcaccctgcagctctctcaaatatttttttctacagatacgaggcaattgcttgcagtaaagggaatacagaattgattgcatctggtccttttgatcaattagtcctgcacttggaagatgctaggaagttccaatcgtgttcaacagctggcacttttaagctgtcgttgtctgggaatgcaaaaggatcttcctggttcacaaaatccaccatagcacggtatctgcaatcaacatttttctagtttttatgtttctccttgcagagaccatgacataattggatcccccttacaggttcctgaataccataaattcaccagatgcctcaaaatctgcaaatggaattttacatgaaatctcacaactggaggaaactagaaagtttcatcaatctctctattctaaggtatcacaactcttcccgtaaaatacccatagtttttagtcacgacgacctgaacatttcaacgtagatgccattataatgagcatttatcttttgtaggaacaacgaaatcctatgggtggtgctttatccggtacattgaaagaaatatttggtcatccattgctctgctctgtcttacttgaatgtccttacaacctttaaatgcacatgtgcacctagactcaacatactacaatctatgctagattgcatttaccattttagtaccagtttggcttgatcgttcagacttttactagcaatggtagtattcctagttgagattatcttttgctgacccttagagtagattaattgttctctagttgagattatcaatgattattttgcttgtagttaacagcaatagttgtcagcaaaaaaatctgagaataatccatccttctataagattctgttaatttgttgtcggtacatttgcaatctaaagtaaccatgtatgcctcaaggtcctcaacaagtactcaaaagtgttaatttattgtagtatgttgataaagcataccttcctttaggaagtctcttaacaagggcagaggattttctgttagaagctatttgtttgagtaggggaattttagttgaattctctaattattgtatcaagcttcaatggcccttaaaattttatgctcactttattgcaatatttaatcatctttgcaggaggtgtctttggtaccattggcgtagaacaacaggtgaactgcttttcatttctgcaagatctgaaccagctttatggttttgtattattttaagtcttacatttcattcttaaaatacctttcagggaaatgttggcccaaactcatctgaagcaacaaagtaaacctttttcttctttttttttttgctactttatcttgcccttcttttagctgacgatctatatgattactatgctaggaatgaattgcttcgagctctggatttgaggttgactgtactgaaagaggagatctttgcgttgttgaatagagcagtcgtttccaatatgtcaactagagatgtatctgatttatcctcatttgttcagcacttcggtgcatcagagttcaggtatggtccatgagcattgtgcatgcagggttcaaggccactgttttttctactaaaaataagtgtaaatgccaaaaagtgttacttagtaggtcaaataactatcctatattcatcgataagtccacttatttataattctgtcattatttggaagaaaactgacctacctgatcacttggaaataacgtgcttttttaagactgtatgttacatcctcatcactgaaattatgtattgtttcttttaattcatgtatcaagaattaactgctgtttttcttgtttgttagctggttgatgcggtgcctactgttgatcccagactgccaaccctctgaggtctcccaacagcagtctttccctgccgagaaagatgacaagggagaaaatgcacttcatactcgtaatatcagctctcataccattatccagaggcctattaccaacaatgtttccccagcaaagcttgctcaaattgagcgtgaaagctcaactgaaagtgatgattcttctgagtccagtgctgaagatgaggctgtcgttgaaagaagccggccactcatgaggtctgcttcacctaggagatctgcttctccaatgcgaagggttcaaattggtagatcaggatctcgtaggtcaacagcgattgccatcaagagtctcagctatttcccccctagtcaaagaattcctttggataaagatgatgaaagtggcagttgcaatggtgaaactgaccagccttcaaggaaatctgacaataatgtaagaaggatgagtgtgcaggatgcaataaatctcttcgaaagcaagcagaaggatcagaatccggattcgcaaaataagaaagctggcttgtttgctacaaagtcagtactaagaaggtggagtgcaggaatgggtgattccttgaacaataattcagaagaaaaaaccatagattccacatcccaaagtaaatccaacaatacaggatccgattcagagaaggatggagctgaaacacaggctgagccaggttcagcttcagcttctaacactgttgttacgccttctgttgaaggttttcacactaatatgcaaggtgttgcaatgccagaaacagagacagcggtttcatcccatactgaaatttctgctgagcagacaaagtcagggcaagaggaaaacagtgatcgggcaatggcctctgctgagtggaaccgccagaaggaagctgagcttaatcagatgttaatgaaaatgatgcaagtcatgcctggaaagttttcgagtgctaatgtcaccactactggcatcacttccacaaatgagaagaaaggtggactgcaaggtcagcataaagagaagcgagactcgaaagttcgaaccgataaaggtggaaggcggccagcaaaggaggcaagcactaggcccttgaaggaaacagttgggcagaagaaggcagcaattacccccaaaactggcactgcagctgagaaacgcaattctccagttccacaaagggcacggagaaattcatcacctccggtcctaccaaaagaattgaccccaaaagcgcctgccagaaagagctcacccaaaccatcacctgcacctgtgacccgcagttcatggtcaggtggatctttgactaaagcaactactgcacagaaaactaaaagctctcctgggacagtttcagcaccgacagcaactagtcggagaaggactccagtagcaccctcatcttctcaaccaacttcaaaggtggaaagaagtgctcaaccggtgaagaacaaaaaggaaacagttgctgcttcaaagccagcaattaagggaattgaagaaaagaagactaaaacagcaacaaagacaagcaggctagctaaaagtacacctatttcagatgaaaaatcaagtgcagcaactaggccaaacttgtataacaaggttgcaaagaagagcagtgttgtaccgctagaatcaaaaccatcaaagaaagctactgggattagtcaaagtgctggtactgatgctgtgaagagtaagatgccacaacttgatgactcttccaatgacattggaaatattacccaagctgaagataaggagcactctgctgtgacaacccagccaaaaactactaaggtattggaggctgatcttgctcaaccagcacatgatgttgatgaaaatttagaaatttcgctcgataatgacttaaatattgaaaaaacagaaaattcggccccaagtttagctacaacagaaatggactccagtgaacaggttgaacctcacactgaggttcaaccacctcctgaagaggacatgggcatctcatcagctgcctgggtagaggtagagcatgaagaagttactgatgtgggtgaaaatgtagtgcctgaggatgtcacctcaccatcaattgagcccttgccatcttcaagccctagaatccgtcactcattgtcacaaatgctgcaagcagatagcaatgagccggaaattattgagtggggaaatgctgaaaacccacctgcaatagtttttcataaagattctccaaagggattaaagaggcttctaaagtttgcgcgtaaaaataaaggagacagcaacagtaatggttgggcgagcccatctgttgtttctgaaggagaagatgaacttgaagaaccacgaggtggtaatgaaggtgtaaattcgagcaggagaacatttgatggccccaagactaacagcatcttatcaggtacattttctaccatgagagggcattttttctgcagccagtatagctataggagaaatctgaatatagagtacaagctttagtttttgagctgctctgatttcaccatttaacagcgcatgatgacagtaggtagaaatgcatttccaattcccacatgtttatacacacttaagtgaagtaactgaggtcacaacattattgtttcacaagagtaccaagcaccttttttaaaagaacttgtctgcagcgaagatttatgggatgcttctgaaatggaagagcagattatctttcatgcttgctcacattgtgtttatatttatttcctttctatttcaactatgcttattcttccccagctcaatcaaccaccggcagcttcaactcaacgaattcagacaggttacgggataggcctggagctgccccatcaactaaatgttagttcttgcaaacatagtatcgtcatcacttgcattatgattataataaactgcagccatctctaatacatctttgctaccttgtacttccagcgtcaaggtcgttcttctccctatcaaacttccggagcagcagatcaaacgagtcgaagctcagatagcatgccatgttctccaggagatacatggataattggatagtcgatcccttccagtttggaggtcaactgatgtaaaaaaaaagagatggtttgagattgattgattgttcggacggagccagcttgttgtgtttggttctgggttttctgcaatttgatatagtctctgcgtctaatgtcatactcaacctctcacctttcttgtacatcttttcactttttaacagttgctggaactgcaagcttatttggatccggtcgatgttagggaaactggtgctaatgtaaagtgcatagcgtgagcctgaggtgctcacagccgattgcgatgcccgaacttgatctg</dnaseqindica> 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| External Link(s) |
