Os03g0333200

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0333200| Description = Similar to Resistance protein candidate (Fragment)| Version = NM_001056557.1 GI:115452842 GeneID:4332743| Length = 3...")
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Gene Name

Os03g0333200

Description

Similar to Resistance protein candidate (Fragment)

Version

NM_001056557.1 GI:115452842 GeneID:4332743

Length

3169 bp

Definition

Oryza sativa Japonica Group Os03g0333200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12359302..12362470

Sequence Coding Region

12359542..12362223

Expression

GEO Profiles:Os03g0333200

Genome Context

<gbrowseImage1> name=NC_008396:12359302..12362470 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12359302..12362470 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggtgagttctaggtttgtggccgtgcttcttctggtggcgctggcgccggcggcgcgggggcagggaggaggagggggcaactcgagcgccccggcggcgtcgccgccggggccgttcgtgccgcgggacaacatcctgctcgactgcggcgcgacggggcaggccaacgacacggacgggcggctctggaccggggacacgggctccaagtacctgccggcgaacctcgccgccgcggccgccaccgcgcaggacccttctgtgccgcaggtgccgtacctcaccgcgcgcttctccgcggcgcccttcacctactcgttcccggtcggcgccgggcgcaagttcctcaggctccacttctacccggcgaactactccaaccgcaacgccgccgacgcgctcttctccgtctccatccccgaccccaacatcacgcttctctccaacttcagcgcctaccagaccgccctcgccctcaacttcgactacctcgtccgcgaattctccgtcaatgtcactgcctcaaccctcgacctcactttcacaccggagaagggccacccaaacgccttcgccttcgtcaacggcatcgaggtcgtctcctcccccgacctctttggcagctccaacccgatggaggtcaccggcgacggcagcggcacgcctttcccgatcgacgccggtactgctatgcagaccatgtaccggctcaacgtcggcggcaacgcgatctccccctccaaggacacgggcgggtatcggtcatgggaagatgacacgccatacataccctttgcgtcattcggggtgagctacgcgaatgacaccaatgttcccataaattaccctgacagtattccgcagtatgtggcgccggcagatgtctactctacggcgcggtcgatggggcctgacaacaatgtgaatttgcaatacaatctcacctgggcaatgcaggtggatgctggttatcagtatctcgtgaggctccatttctgtgaaatacagtctgggatcagtaagatcaatcaacggacatttgacatctacatcaacaaccagactgcttttagtggcgctgatgtgattgcgtggtctactgggcttggcattccagtgtacaaggattttgtggtgttccccatgggttcagggcctatggatttgtgggtggatctacatccaaatgtcaaaaacaagccacagtactataatgctatcctcaatgggatggaggtttttaagttgcagcttactaatgggagccttgctgggctcaaccctgtccctagtattgtaccaacagcgtcgggtggaaattctgggaagaagtcaagtgttggtccaattattggaggagtgattggaggtctggtagttcttgcacttggatgttgctgcttctttgtgatctgcaagcgtcggcagagagcaggtaaggattcaggaatgagtgatgggcattctggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcacacactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgtggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttttggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagcgtggaaacccattgtctgagcagggtgtgcatgagttccaaacagagatcgagatgttgtcgaagctccgccaccgacatcttgtgtcgcttattggttactgcgaggagaagaatgagatgatcctggtctatgactatatggctcacggaactcttcgtgagcacctgtacaagacccaaaatgcaccactttcttggaggcagcgcttggatatctgcattggtgcagctcgtgggcttcactacctacacactggtgcaaagcacaccatcatccaccgtgatgtgaagacgacaaacatcctcctcgatgagaagtgggtagccaaggtttcagattttggtttgtccaagactggtccaacaatggatcatacgcatgtgagcacagttgtcaagggcagttttggttatcttgatcctgagtacttccgcaggcagcagcttactgacaaatctgatgtctattcttttggtgttgtactgtttgaggtcctatgtgctcggcctgccttgaatcccactcttgcaaaggaagaagttagcttggctgagtgggcattacactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagattgctccacaatgtttcaagaagtttgcagaaacagctgagaagtgtgtttctgatcagggcattgaccgtccttcgatgggagatgtgctgtggaacttggaatttgcccttcaaatgcaggaaagtgcagaggagagcggaagccttggatgtgggatgtcagacgacagcactccccttgtgatagttggaaagaaggatcccaatgatccatctatcgagtcaagcaccacgacaacgacaactacctcgataagcatgggtgagcagagtgttgcaagtattgactcggatgggctgacgcctagtgctgtcttctcgcagatcatgaaccccaagggacggtga</cdnaseq>

Protein Sequence

<aaseq>MMVSSRFVAVLLLVALAPAARGQGGGGGNSSAPAASPPGPFVPR DNILLDCGATGQANDTDGRLWTGDTGSKYLPANLAAAAATAQDPSVPQVPYLTARFSA APFTYSFPVGAGRKFLRLHFYPANYSNRNAADALFSVSIPDPNITLLSNFSAYQTALA LNFDYLVREFSVNVTASTLDLTFTPEKGHPNAFAFVNGIEVVSSPDLFGSSNPMEVTG DGSGTPFPIDAGTAMQTMYRLNVGGNAISPSKDTGGYRSWEDDTPYIPFASFGVSYAN DTNVPINYPDSIPQYVAPADVYSTARSMGPDNNVNLQYNLTWAMQVDAGYQYLVRLHF CEIQSGISKINQRTFDIYINNQTAFSGADVIAWSTGLGIPVYKDFVVFPMGSGPMDLW VDLHPNVKNKPQYYNAILNGMEVFKLQLTNGSLAGLNPVPSIVPTASGGNSGKKSSVG PIIGGVIGGLVVLALGCCCFFVICKRRQRAGKDSGMSDGHSGWLPLSLYGNSHTSSSA KSHTTGSHASSLPSNLCRHFSFVEIKAATNNFDESLLLGVGGFGKVYRGEIDGGATKV AIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGTLRE HLYKTQNAPLSWRQRLDICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVS DFGLSKTGPTMDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARP ALNPTLAKEEVSLAEWALHCQKKGILDQIVDPHLKGKIAPQCFKKFAETAEKCVSDQG IDRPSMGDVLWNLEFALQMQESAEESGSLGCGMSDDSTPLVIVGKKDPNDPSIESSTT TTTTTSISMGEQSVASIDSDGLTPSAVFSQIMNPKGR</aaseq>

Gene Sequence

<dnaseqindica>241..2922#gagctccccctccaccaccgccgccgccgccgcggctgccactctcggttcctcttcctccccaccgagctccaccccccacgaatcttagcctcccactcctcttcacgccgcgccgctaagagcgatcgagccgggggtttccgtcagagacgccgcgaaaatcgccccagatcggtggatgggcgatctgtgagccgcggcagggggagagagagagagagagaggaagctgaagccatgatggtgagttctaggtttgtggccgtgcttcttctggtggcgctggcgccggcggcgcgggggcagggaggaggagggggcaactcgagcgccccggcggcgtcgccgccggggccgttcgtgccgcgggacaacatcctgctcgactgcggcgcgacggggcaggccaacgacacggacgggcggctctggaccggggacacgggctccaagtacctgccggcgaacctcgccgccgcggccgccaccgcgcaggacccttctgtgccgcaggtgccgtacctcaccgcgcgcttctccgcggcgcccttcacctactcgttcccggtcggcgccgggcgcaagttcctcaggctccacttctacccggcgaactactccaaccgcaacgccgccgacgcgctcttctccgtctccatccccgaccccaacatcacgcttctctccaacttcagcgcctaccagaccgccctcgccctcaacttcgactacctcgtccgcgaattctccgtcaatgtcactgcctcaaccctcgacctcactttcacaccggagaagggccacccaaacgccttcgccttcgtcaacggcatcgaggtcgtctcctcccccgacctctttggcagctccaacccgatggaggtcaccggcgacggcagcggcacgcctttcccgatcgacgccggtactgctatgcagaccatgtaccggctcaacgtcggcggcaacgcgatctccccctccaaggacacgggcgggtatcggtcatgggaagatgacacgccatacataccctttgcgtcattcggggtgagctacgcgaatgacaccaatgttcccataaattaccctgacagtattccgcagtatgtggcgccggcagatgtctactctacggcgcggtcgatggggcctgacaacaatgtgaatttgcaatacaatctcacctgggcaatgcaggtggatgctggttatcagtatctcgtgaggctccatttctgtgaaatacagtctgggatcagtaagatcaatcaacggacatttgacatctacatcaacaaccagactgcttttagtggcgctgatgtgattgcgtggtctactgggcttggcattccagtgtacaaggattttgtggtgttccccatgggttcagggcctatggatttgtgggtggatctacatccaaatgtcaaaaacaagccacagtactataatgctatcctcaatgggatggaggtttttaagttgcagcttactaatgggagccttgctgggctcaaccctgtccctagtattgtaccaacagcgtcgggtggaaattctgggaagaagtcaagtgttggtccaattattggaggagtgattggaggtctggtagttcttgcacttggatgttgctgcttctttgtgatctgcaagcgtcggcagagagcaggtaaggattcaggaatgagtgatgggcattctggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcacacactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgtggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttttggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagcgtggaaacccattgtctgagcagggtgtgcatgagttccaaacagagatcgagatgttgtcgaagctccgccaccgacatcttgtgtcgcttattggttactgcgaggagaagaatgagatgatcctggtctatgactatatggctcacggaactcttcgtgagcacctgtacaagacccaaaatgcaccactttcttggaggcagcgcttggatatctgcattggtgcagctcgtgggcttcactacctacacactggtgcaaagcacaccatcatccaccgtgatgtgaagacgacaaacatcctcctcgatgagaagtgggtagccaaggtttcagattttggtttgtccaagactggtccaacaatggatcatacgcatgtgagcacagttgtcaagggcagttttggttatcttgatcctgagtacttccgcaggcagcagcttactgacaaatctgatgtctattcttttggtgttgtactgtttgaggtcctatgtgctcggcctgccttgaatcccactcttgcaaaggaagaagttagcttggctgagtgggcattacactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagattgctccacaatgtttcaagaagtttgcagaaacagctgagaagtgtgtttctgatcagggcattgaccgtccttcgatgggagatgtgctgtggaacttggaatttgcccttcaaatgcaggaaagtgcagaggagagcggaagccttggatgtgggatgtcagacgacagcactccccttgtgatagttggaaagaaggatcccaatgatccatctatcgagtcaagcaccacgacaacgacaactacctcgataagcatgggtgagcagagtgttgcaagtattgactcggatgggctgacgcctagtgctgtcttctcgcagatcatgaaccccaagggacggtgaggtaacaatgtctcggtttgttaccctgcaggcataatctattcattcagcatatgttcatgagtttgcccttatgttctcttgaattatggatcggaagtcagataattgtttcaaattagatggttctgtctttccctgtgttttctccctgatgtagtgcctataagcttatcggcatgtattgtaatataccataccactgctattgacccaacgaatgatactgtatgagagagtgatacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0333200, RefSeq:Os03g0333200