Os03g0334700

From RiceWiki
Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0334700| Description = Similar to Potential phospholipid-transporting ATPase VB (EC 3.6.3.1)| Version = NM_001056565.1 GI:115452858 GeneID:4...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0334700

Description

Similar to Potential phospholipid-transporting ATPase VB (EC 3.6.3.1)

Version

NM_001056565.1 GI:115452858 GeneID:4332752

Length

4545 bp

Definition

Oryza sativa Japonica Group Os03g0334700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12426381..12430925

Sequence Coding Region

12426382..12426745,12427018..12427348,12427487..12428342,12428535..12428658,12429244..12429463
,12429546..12430004,12430093..12430294

Expression

GEO Profiles:Os03g0334700

Genome Context

<gbrowseImage1> name=NC_008396:12426381..12430925 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12426381..12430925 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agaaaagatttcaagttctatggcatcgctttggagatatttttctccttcctaagttctgtgataatctttcagataatgataccgatatcactatacatcaccatggagttagtcagagtggggcagtcatactttatgattggagatacacggatgtatgacagtagttcaggttcaagatttcaatgccggtccttgaatatcaatgaagatctcggtcaaatacgttacatattttctgataaaacgggtaccttgacacaaaacaagatggagtttcatcaagccagcatctacgggaagaactatgggagccccttgcaggtcactggtgactcatcttatgaaataagcacaacagagtcatcgagacagcaaggcagtaagtccaagtcaggagtcaatgttgatgcagaactcatagcacttctgagtcaaccattggttggagaggaaagactttctgcccatgatttttttcttactttagctgcatgcaatacagtcattccagtcagcacagaaaattctctcgatttggttaatgaaataaatgagataggcagaattgattaccagggtgaatcacctgatgagcaggccttagtaactgcagcttctgcttatggatatacgcttgtggaaaggacaactggccacattgttgttgatgttcagggggagaagataaggctggatgttcttggtctccatgaatttgacagcgtgagaaaaaggatgtctgtcgttgtacgatttccagacaacattgtgaaggttcttgttaagggtgctgatacttcaatgcttagcattttgaggagagaagatgatgatgaacttcacaattctttgcatgctaaaattagagaaactacagaaaaccacttgtcaggttactcatcagagggtttacgaactttagtaattggttcaaagaacctgactgatgcagaatttggtgagtggcaagaaaggtatgaagaagccagcacctccatgacagagagatcagcaaagctccgacaggcggcagctcttgttgagtgcaatctgactcttcttggtgcaactggaattgaagataagttgcaggatggtgttcctgaggccattgagtctctccggcaggctggaatcaaggtttgggttctcaccggagataagcaagaaactgctatatcgattggtctgtcatgtagactattgactcaaaatatgcatttgattgttataaatggatcctcagagtttgagtgcaggcgccttctagctgatgctaaagccaaatttggaataaagtcatctgattctgggagggattgtcaagatatcgaacatacgcacaatggtgacgtttctaagttgaggacctctaatggtcacatgtctgaaagtggcatacataacttcgagctgactggagttattgcaagtgacaagtcagaatactctgagaaagtggcaaattttgctgacactgatctagcattggtaattgatgggagctccctggtgtatattttagagaaggatcttgaatcagagttgtttgatctggcgacttcctgtaaagttgttatctgctgccgtgttgctccactacaaaaggctggaattgttgatttgattaaaagcagaacaagtgacatgaccctggcaattggtgatggggcaaatgatgtttcaatgatacagatggcagatgttggtgttggaatatgtggtcaagaaggtcgtcaagcagtgatggcatcagattttgccatgggacagttccgctttctgaagagattacttcttgtacatggacactggaattatcagcgtattgcatacatgatcctctacaatttttaccgaaatgctgtttttgtgctaatgttgttctggtatatcttgcatacagcatattctgcaactcttgcattaacagattggagtagtgttttctattcccttatctatacgtcaattcccacagtggtagttggcattctggacaaggacttgagtcataatactctacttcattatccgagactatatgaaacagggcttcagaatgagggctacaacttgacgctcttctggatcacaatgctagataccttgtggcaaagccttgtccttttctatgttcccttcttcacatacaatatcagtacaatggacatatggagtatgggaagcttgtggacgattgctgtggttatacttgtcaatattcatctggccatggatatccaacgttgggtgcttataacccatcttgctgtatggggctctatagctgcaacatttttgtgcatggtgttaatagattctattccaatattccctaactatgggacaatatacaatatggctgcttcaagaacttattggcttagtgtttgccttataatagtcctaggcttgcttcctcggtttctttgcaaagtaatctatcagaccttttggccatctgatattcaaatagcaagagaagctgagttattaaaaaagctaccccggcagttgggttcaaggcctgcaagtgatatcagctga</cdnaseq>

Protein Sequence

<aaseq>RKDFKFYGIALEIFFSFLSSVIIFQIMIPISLYITMELVRVGQS YFMIGDTRMYDSSSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTQNKMEFHQASIYGK NYGSPLQVTGDSSYEISTTESSRQQGSKSKSGVNVDAELIALLSQPLVGEERLSAHDF FLTLAACNTVIPVSTENSLDLVNEINEIGRIDYQGESPDEQALVTAASAYGYTLVERT TGHIVVDVQGEKIRLDVLGLHEFDSVRKRMSVVVRFPDNIVKVLVKGADTSMLSILRR EDDDELHNSLHAKIRETTENHLSGYSSEGLRTLVIGSKNLTDAEFGEWQERYEEASTS MTERSAKLRQAAALVECNLTLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQE TAISIGLSCRLLTQNMHLIVINGSSEFECRRLLADAKAKFGIKSSDSGRDCQDIEHTH NGDVSKLRTSNGHMSESGIHNFELTGVIASDKSEYSEKVANFADTDLALVIDGSSLVY ILEKDLESELFDLATSCKVVICCRVAPLQKAGIVDLIKSRTSDMTLAIGDGANDVSMI QMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIAYMILYNFYRNA VFVLMLFWYILHTAYSATLALTDWSSVFYSLIYTSIPTVVVGILDKDLSHNTLLHYPR LYETGLQNEGYNLTLFWITMLDTLWQSLVLFYVPFFTYNISTMDIWSMGSLWTIAVVI LVNIHLAMDIQRWVLITHLAVWGSIAATFLCMVLIDSIPIFPNYGTIYNMAASRTYWL SVCLIIVLGLLPRFLCKVIYQTFWPSDIQIAREAELLKKLPRQLGSRPASDIS</aaseq>

Gene Sequence

<dnaseqindica>2..365#638..968#1107..1962#2155..2278#2864..3083#3166..3624#3713..3914#cagaaaagatttcaagttctatggcatcgctttggagatatttttctccttcctaagttctgtgataatctttcagataatgataccgatatcactatacatcaccatggagttagtcagagtggggcagtcatactttatgattggagatacacggatgtatgacagtagttcaggttcaagatttcaatgccggtccttgaatatcaatgaagatctcggtcaaatacgttacatattttctgataaaacgggtaccttgacacaaaacaagatggagtttcatcaagccagcatctacgggaagaactatgggagccccttgcaggtcactggtgactcatcttatgaaataagcacaacaggtaagatcactgtctttggacaaatatcagcgtgtatttggtttatgaatattggacaaattgttcctcaggttgaatgactaatggatgcttaattcgtgtgtacaaaaaaacattgttcctatataccatataattgcacgcttcaaactgtgaaaatagtagacatttatatgcagctctttccatttatttattctcacttatgctcttacctcagataggattttaatcatttacctattgatgcttaagtctctgtctctttgcagagtcatcgagacagcaaggcagtaagtccaagtcaggagtcaatgttgatgcagaactcatagcacttctgagtcaaccattggttggagaggaaagactttctgcccatgatttttttcttactttagctgcatgcaatacagtcattccagtcagcacagaaaattctctcgatttggttaatgaaataaatgagataggcagaattgattaccagggtgaatcacctgatgagcaggccttagtaactgcagcttctgcttatggatatacgcttgtggaaaggacaactggccacattgttgttgatgttcagggggagaagataaggtatatactgcatacttttttctcgacgataacatttcctgtaccattcatttcatcttcagtttactattaaatgcattttttactgttgagaattttctgtctgttatttaatatttaattttactgtcataacaggctggatgttcttggtctccatgaatttgacagcgtgagaaaaaggatgtctgtcgttgtacgatttccagacaacattgtgaaggttcttgttaagggtgctgatacttcaatgcttagcattttgaggagagaagatgatgatgaacttcacaattctttgcatgctaaaattagagaaactacagaaaaccacttgtcaggttactcatcagagggtttacgaactttagtaattggttcaaagaacctgactgatgcagaatttggtgagtggcaagaaaggtatgaagaagccagcacctccatgacagagagatcagcaaagctccgacaggcggcagctcttgttgagtgcaatctgactcttcttggtgcaactggaattgaagataagttgcaggatggtgttcctgaggccattgagtctctccggcaggctggaatcaaggtttgggttctcaccggagataagcaagaaactgctatatcgattggtctgtcatgtagactattgactcaaaatatgcatttgattgttataaatggatcctcagagtttgagtgcaggcgccttctagctgatgctaaagccaaatttggaataaagtcatctgattctgggagggattgtcaagatatcgaacatacgcacaatggtgacgtttctaagttgaggacctctaatggtcacatgtctgaaagtggcatacataacttcgagctgactggagttattgcaagtgacaagtcagaatactctgagaaagtggcaaattttgctgacactgatctagcattggtaattgatgggagctccctggtgtatattttagagaaggatcttgaatcagaggttggagttccatcttctttgcagtaatctgtgaaagttttttttgttgcattggttgatcaaatgccacaatttggtgaaccttatagccagttctttactgcacatacattgggtacacacaatcatatgtaaccacgtgcataccctcctacttcaattaatcatttctttcatgactttttatggcagttgtttgatctggcgacttcctgtaaagttgttatctgctgccgtgttgctccactacaaaaggctggaattgttgatttgattaaaagcagaacaagtgacatgaccctggcaattggtgatggtgagattattttcgtctgattttagttttgtgatgctggtatttgacatctcatatttttgttgacatactcatttgtcattgttgtcctgtttgtaattgcacgttactttgaactagatgtggaactttgcaggtcataggttccttcagtttcttgctaagttgaaccgcattaccaattaatgttaaaacattttaaattgcatcatcagatgcctgacacttgaattatcattgatatatgattggacctaccttttgtgcctaaacttttttatgtattggatgctttgtgatattatatcctggccatctgttgatgtgttgcattttcataggagtccaattcagcaaaaacaatagtcttatctgttgaacctgacgatcagcaagggcaaatgctttcagtggcacaggggatcaaattatatctttctctagaaatcaatgttgccatcttatctttcgtcgcctttttgtggccagcattttttccctactatttgaccttaattgattactcaccatgttcaacaaagaattgacacccttttgttttgtgaacatgtttcacttttgcaggggcaaatgatgtttcaatgatacagatggcagatgttggtgttggaatatgtggtcaagaaggtcgtcaagcagtgatggcatcagattttgccatgggacagttccgctttctgaagagattacttcttgtacatggacactggaattatcagcgtattgcatacatgatcctctacaatttttaccgaaatgctgtttttgtgctaatgttgttctggtacacattctaccccctgctcattcttgtatttgtaatttcaattgaagctaacaaaaatattactatgtgattttttcaggtatatcttgcatacagcatattctgcaactcttgcattaacagattggagtagtgttttctattcccttatctatacgtcaattcccacagtggtagttggcattctggacaaggacttgagtcataatactctacttcattatccgagactatatgaaacagggcttcagaatgagggctacaacttgacgctcttctggatcacaatgctagataccttgtggcaaagccttgtccttttctatgttcccttcttcacatacaatatcagtacaatggacatatggagtatgggaagcttgtggacgattgctgtggttatacttgtcaatattcatctggccatggatatccaacgttgggtgcttataacccatcttgctgtatggggctctatagctgcaacatttttgtgcatggtgttaatagattctattccaatattccctaactatgggtaagttttcccagtgcctccctcaaaccatcatatatatatatttctaaatgacaacatttgaagtctatcatcttattactggcaggacaatatacaatatggctgcttcaagaacttattggcttagtgtttgccttataatagtcctaggcttgcttcctcggtttctttgcaaagtaatctatcagaccttttggccatctgatattcaaatagcaagagaagctgagttattaaaaaagctaccccggcagttgggttcaaggcctgcaagtgatatcagctgacaacaatggttcggcgcagttgctctgtgatcccagtttgcgggttatgttgattcaattgttgagctgatttttgcccatttttttggtaagttctgttcatcaatttacacggtgcatcatttgatttagggcaagtgttacctagtcatgtattatttgtctcgagaagtgcagtagtgctgacctgtcagttgtgcctgtttctcctttatctatggtccaatgagcacagaagtaagatatacgaattctggttgcagaagaggctgaaagatgagatgaggcggctgtggaaaaaggtactgactgtgaatgggtaggcaccagacagcgtcgtccttcgggggccaagtaatcaagaaatgacaaatgtacagatatgggaaagggatacatacactctgtattttaaggtagattttgtggttaggaaataaataggtacatagatacaaaattctttttgccaatcttttgtattacttgattatatgttaaccatttttctttttcttccctcctcgtcaaggttttagatggagacttagtggtgtgtccaaatggaattttacgctttacacggtcacaagattgatctcctttcgtgacctatattcatactcttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0334700, RefSeq:Os03g0334700