Os03g0334800

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0334800| Description = Lung seven transmembrane receptor family protein| Version = NM_001056566.1 GI:115452860 GeneID:4332753| Length = 515...")
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Gene Name

Os03g0334800

Description

Lung seven transmembrane receptor family protein

Version

NM_001056566.1 GI:115452860 GeneID:4332753

Length

5156 bp

Definition

Oryza sativa Japonica Group Os03g0334800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12431061..12436216

Sequence Coding Region

12432328..12432454,12432741..12432877,12433333..12433428,12433831..12434764,12435760..12435950

Expression

GEO Profiles:Os03g0334800

Genome Context

<gbrowseImage1> name=NC_008396:12431061..12436216 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12431061..12436216 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcggcggcggggcctcgccgcgctcgccgtcctcctcgccctcgcggcgcgcggcgcggacgcgtccgtccacgagtactcgggcggggggttcgcgccgcgggccaactccttcttcttccacggcggcagcgaggggctgtacgcctccgaccccacctccaactcctccgcctccttcatcaggtttgactctgtcacatttcgacggacccaggagtcagcaggtaggcatgaggctatgcagcaaaagacagggttagttgaggctattattgttgagatccaggacagaagcaagattggtggttcttacttgcattctgatgcaatatgctgcactcctgagctcgataaagagaagtcctgcaaagttggtgaagtaattatacagccaaatcctgataatcctgactggccaaaaagggttcagacattttttagtggtagagatgaagaagctagcatggtcacacaagttgtatctataaacaaaacagggatgtactacctctattttatgttctgtgatccacagctcaagggattgaagattacaggcaggactgtttggcgaaacccacaaggttatctccctggtaaaatggccccaatgatgacattttatggtttcatgtcgcttgcatatcttgtacttggacttctgtggtttcttcagtttgtgcgatgctggaaggatattttgcagctgcactaccatataacagctgttattgctcttggcatgtgcgagatggctttctggtactttgagtatgctaacttcaattcgactggaaacagacctatggctataaccttgtgggcagttacatttactgctgtgaagaagaccatatctcgccttcttttattagtggtttctatgggatatggtgttgttagacccacattaggtggggttacatctaaagtaggtgctcttggtgtcgtctattttattgcttcggaaggtcttgaacttgttgaaaatcttggaaacatcaatgacttctctgggaaaacaaggttatttctggtgttacctgttgccatacttgatgctaccttcattatctggatattttcatcgctctcgagaactttggagaagctccagctgcggagaagtatggcaaaacttgaattgtatcggaagtttacaaattctctagctttgtcagttcttatctctattgcttggattggctatgagctatacttcaatgcaactgatccattgagtgagctatggcgaagggcttggatcatccctgcgttttggaatgttctctcctatgtcctccttgccatcatatgcatcctttggtctccgtctcgcaatccaacagggtttgcgtattcggaggatacagctgacgaggctgatgaggaaggtctctctcttgtaggcagtgctgtgaaaggaactggagacatagtgaacatgcatgtgtttccagaggataaacgtgcatga</cdnaseq>

Protein Sequence

<aaseq>MQRRRGLAALAVLLALAARGADASVHEYSGGGFAPRANSFFFHG GSEGLYASDPTSNSSASFIRFDSVTFRRTQESAGRHEAMQQKTGLVEAIIVEIQDRSK IGGSYLHSDAICCTPELDKEKSCKVGEVIIQPNPDNPDWPKRVQTFFSGRDEEASMVT QVVSINKTGMYYLYFMFCDPQLKGLKITGRTVWRNPQGYLPGKMAPMMTFYGFMSLAY LVLGLLWFLQFVRCWKDILQLHYHITAVIALGMCEMAFWYFEYANFNSTGNRPMAITL WAVTFTAVKKTISRLLLLVVSMGYGVVRPTLGGVTSKVGALGVVYFIASEGLELVENL GNINDFSGKTRLFLVLPVAILDATFIIWIFSSLSRTLEKLQLRRSMAKLELYRKFTNS LALSVLISIAWIGYELYFNATDPLSELWRRAWIIPAFWNVLSYVLLAIICILWSPSRN PTGFAYSEDTADEADEEGLSLVGSAVKGTGDIVNMHVFPEDKRA</aaseq>

Gene Sequence

<dnaseqindica>3763..3889#3340..3476#2789..2884#1453..2386#267..457#accgctaaccactctcgcctcctcccccgtctgtactgactactgagatggaagcgagcaagtgaaagagagagattcctggcttcctgcctcacgcgcacgcacaccaacctcaagccatcgggctctctcaccccgcacttctcccaccgccaccgaggcacggctctcgaaccttcccactgcttcctccctccctcccctcccctccccgcgacgagacgagacgagaccggcggcggcggccggagtcaagagccttccctatgcagcggcggcggggcctcgccgcgctcgccgtcctcctcgccctcgcggcgcgcggcgcggacgcgtccgtccacgagtactcgggcggggggttcgcgccgcgggccaactccttcttcttccacggcggcagcgaggggctgtacgcctccgaccccacctccaactcctccgcctccttcatcaggtgcgcgttcggcgctgaattttccccgtctctcctcgcgcgctagggtttttgtcgggggggatcagacggtcctgatcctgatcgggcgcgtttcacttggggtttcggattccccgggggtttggatcagatgcgctggtcaaatgtcgcacctgtaaatctcgatcggagattttttagaaatttatgcgtacatggattgatccattgggatgatctgaagtagctagtactaaaaattgattcttttcttcgttcagttcatgtgatccgatatctattactgtattcgaccagctaacttaattttgttttattattcgtactgccatgtgattaggttgctattcagggatttttttttattattcggttttactgccatttgattacgctgctattcagggagtgctagcaccttttgtttctacaataagcatttttgttgggtatgaaatgtgttcgttatttaccaccacgacaaggtgatctgcgtacccgccatgtcaaatattggagcagtagcatgtaattaacacacatggcacaaacaacatggcagtagcataactacacggtggccaattttggagtatccatttgatcaagcatttttttccatgatcatttgtattaaatgcatgggtaagcacagacatactccctccatcccaaattgatcatcttataaggtttgtgcaccaagaccaatgataatttaaaccacatcgatcaagatgtcatgcacaatatgcacacattctcccacaatgcatgcatcgattaaaacacaatgcacaattaaaacctttagcatgcacacattctcctgtgttgtattaattatattccgatgaaatccgtgtccatacggttacatgatgatcaatttgagaaattttagctttcattatatgatgatcaatttggaaagaagggagtactatggaaagaagaatgccatggtcttatttcactggtatctctttcaggtttgactctgtcacatttcgacggacccaggagtcagcaggtaggcatgaggctatgcagcaaaagacagggttagttgaggctattattgttgagatccaggacagaagcaagattggtggttcttacttgcattctgatgcaatatgctgcactcctgagctcgataaagagaagtcctgcaaagttggtgaagtaattatacagccaaatcctgataatcctgactggccaaaaagggttcagacattttttagtggtagagatgaagaagctagcatggtcacacaagttgtatctataaacaaaacagggatgtactacctctattttatgttctgtgatccacagctcaagggattgaagattacaggcaggactgtttggcgaaacccacaaggttatctccctggtaaaatggccccaatgatgacattttatggtttcatgtcgcttgcatatcttgtacttggacttctgtggtttcttcagtttgtgcgatgctggaaggatattttgcagctgcactaccatataacagctgttattgctcttggcatgtgcgagatggctttctggtactttgagtatgctaacttcaattcgactggaaacagacctatggctataaccttgtgggcagttacatttactgctgtgaagaagaccatatctcgccttcttttattagtggtttctatgggatatggtgttgttagacccacattaggtggggttacatctaaagtaggtgctcttggtgtcgtctattttattgcttcggaaggtcttgaacttgttgaaaatcttggaaacatcaatgacttctctgggaaaacaaggttatttctggtgttacctgttgccatacttgatgctaccttcattatctggatattttcatcgctctcgagaactttggagaagctccaggtagcaacttcacggccttgctaattcaagtaaacaatttaattctgttttatgtgtgcttggatatatcacccttgctgttattataattattgtttgcccacaccacattgcttttaatatcacaaagaaaaccccgatctttctgaaaggaattacaaagcctttctccagtaaatctgtaccttgttgttctttgttcaatttcccattcaatacttcatcatagccatgcctttcttgtttcagcaattaatatttatgattacatgtccaatgaatttgattattttgttttttaatatatgtgctataaaaatgacttccagttgatttatgtttattttgtcgacatctttctgtaatatcccctgtactgattcggctctaattacattccagctgcggagaagtatggcaaaacttgaattgtatcggaagtttacaaattctctagctttgtcagttcttatctctattgcttggattggctatgaggtatgaacttgtcaattctatagtcctatttgagatggtagcaaatgttgaattaatcaacactcagggatccttttcttgctgttatatatgatgcacatatttagattatgatgtgaccatttaataacaacttcctcattgcttctgataatggttgatgaatataaagagtcaacgctcagatccttctcccatcttcctatttgacgaacattaatattgagattagaatgtgactgtactacctcgcacattttatttccatatgtggacttgtggaggtggattttattacaaaaaatgataggatacatcaatatgtgatatatcactccacaaacatagaagttcaaattttactgatacaagtactttttttctagagttgcttgatgaatcatctcgagccatgctttaacagcatgacctgacttctttttgtcttgaatcagctatacttcaatgcaactgatccattgagtgagctatggcgaagggcttggatcatccctgcgttttggaatgttctctcctatgtcctccttgccatcatatgcatcctttggtctccgtctcgcaatccaacagggtactgaacctgcaatgaagtttactttctcagttgacaagtagaattatttgtttgagttatctttttgtataagtagtagataggttatttcactttgaacacactagacccctagcaagtcataagggttatacatcttgggtttgctatagactatagacaaatgccttgttttttctttaaagcattggacttgggacgaccctgtgttttaagaaatacaggacattttctgtcactatgtacaaaattttgtcatttatgctgtctgtgctgtgtacaggtttgcgtattcggaggatacagctgacgaggctgatgaggaaggtctctctcttgtaggcagtgctgtgaaaggaactggagacatagtgaacatgcatgtgtttccagaggataaacgtgcatgacaagttgtcatctttagtgcagctgtactcctggctgagtgctatggtaagttcaagttgcccttttgtcctccaataacacacatttgaaatgcgtgtatgggaggcaaaccatctttccaataccgtctagataattttttttgtacatagaatatttaggattagtggactctagtggggattcgtgcaatggatatgtatgtgcctattctatgttttaatgccgtttctattatcactatgttccttctgagtgagatcaatgctccaggtcaattctggccttgcaatctcctgtttatatattatatttgtttacaatgctctactctgcatgaaggtgcggctgtgtttttatgccatatgataacatctttagtgatcaaccttgttaagcgatcctatagcagctacataacatctttatttttattcattaagtgaatgcaaccctgtctggctcacagctttaatgttgtaaatatttttctgtccatggaagtcgttgagacaaaactggaacacaattcaattatcatgatctgttaaccataactagagcagtaaactgaattgccttcagctttgttcttctttttccttggtagtttaaactttttgcaagattttcacatgatatgatatctgttattgccctcctagtttttctaaatcaatttgacaatattgcaagtattatcatgctaacttttgtccttgttcttgattgcagtgaagtaccgtttccctctgcattcatggcaagcttacgacttctgaagcttgcgtgcagtcccagtgtacaggtcgtgactttgtatggaaggatttgacttctatagaattttactcaatccgttgatgactatccaatacaaaaatgtgcgggaaataaacaatgacttggagagcgtgctggggttacttgctgtaattcctgcgcatggtgtggcgtgtgtagtagactcgtaggtcttgtttggtagaagcgcacattgttaaacacattgactgcatccccacgtaacgttggtatgatgacctcgtgccagttgcttatgcattgctcgcacgtatgagatatggaatgatttaattctgggtgtttattcaaggttcaccaaaccgttttgagtgagtttggtggtagctgcatggttatcacgaggtatacccgtgattttgaaaactgaaggttaacgcatcactgagaaggtcacagtatgcgttaaccacgataatacttaatacatatattttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0334800, RefSeq:Os03g0334800