Os03g0336100

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0336100| Description = 11-S plant seed storage protein family protein| Version = NM_001056573.1 GI:115452874 GeneID:4332760| Length = 1782 ...")
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Gene Name

Os03g0336100

Description

11-S plant seed storage protein family protein

Version

NM_001056573.1 GI:115452874 GeneID:4332760

Length

1782 bp

Definition

Oryza sativa Japonica Group Os03g0336100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12497904..12499685

Sequence Coding Region

12498103..12498591,12498704..12499038,12499411..12499438,12499521..12499682

Expression

GEO Profiles:Os03g0336100

Genome Context

<gbrowseImage1> name=NC_008396:12497904..12499685 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12497904..12499685 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacaaggacgagctcgtggagaagaacctcaagatgggcgacgtcctccacatcgacgccggctcgacgttctacatggtcaactccggcaagggccagaggctgaagatcatctgcagcatcgacgcctccgataacatcggcttcggcccttatcaggccttcttccttggtggtggcggcggcgcggcggccgggcagtggaggccagtgggcagaggcgaggaggaggaggaggaggaggaggagttggtggtggacgaagcgtcgtcgacgtggtcgtggacgaagctcgtgggccgtctcctcggagtggtcggaggcggggcgccgtccaactccgtggccgcgcagccgaagaagaagaaggacaagacggtgcgcgcgccggagccgtacaacctctacgagcagggcaccggcttccgcaacgcctacggatccagcgtcgccgtcgacaagcacgactacgagcccctcggccactccgacatcggcgtctatctcgtcaacctcaccgccggatcgatgatggcgccgcacgtgaacccgagggcgacggagtacggcgtcgtgctcagcgggacgggctgcatcgaggtcgtgttcccgaacgggtcgaaggcgatgagcgcgacggtgcgcgccggcgacgtgttctacatcccgcgctacttcccgttctgccaggtggcgtcgcggggcgggccgttcgtgttcttcgggttcacgacgtcggcgcggcggaaccaccctcagttcctcgtcggcggctcctccgtgctccgcgccctgctcgggacggagctcgccgccgcgttcggcgtcccggagaaggcgatgaggaagctggtgctggcgcagaatgaggcggtgatcctgccgtcctggccggagaagaagaagaagaagaagtgggaggaggagcccgaggacgagaggtgggaggagaagaagaaggcggcgaagcagaggaagccatgggttatcgagcaggtgccggcgaagtag</cdnaseq>

Protein Sequence

<aaseq>MHKDELVEKNLKMGDVLHIDAGSTFYMVNSGKGQRLKIICSIDA SDNIGFGPYQAFFLGGGGGAAAGQWRPVGRGEEEEEEEEELVVDEASSTWSWTKLVGR LLGVVGGGAPSNSVAAQPKKKKDKTVRAPEPYNLYEQGTGFRNAYGSSVAVDKHDYEP LGHSDIGVYLVNLTAGSMMAPHVNPRATEYGVVLSGTGCIEVVFPNGSKAMSATVRAG DVFYIPRYFPFCQVASRGGPFVFFGFTTSARRNHPQFLVGGSSVLRALLGTELAAAFG VPEKAMRKLVLAQNEAVILPSWPEKKKKKKWEEEPEDERWEEKKKAAKQRKPWVIEQV PAK</aaseq>

Gene Sequence

<dnaseqindica>1095..1583#648..982#248..275#4..165#tggatgcacaaggacgagctcgtggagaagaacctcaagatgggcgacgtcctccacatcgacgccggctcgacgttctacatggtcaactccggcaagggccagaggctgaagatcatctgcagcatcgacgcctccgataacatcggcttcggcccttatcaggtcgaccacatcatgccttcgttaacaccatcgatcgttttactcgtcatctccgctaatgaattacgatggtgcaatgcaggccttcttccttggtggtggcggcggcggcggttcaaggcacccgcagtcggtgatcgccggctttgaccccaagacgctcgttatcgcgttcaacgttagccctactaaactgaaacagttctcaatttcgaaaaaaaacgaacaatttccatcgtgcaagttacaacacatagacatggggaattgatccattaatctccaatcgatcatataatcatatgcgcgtgattaattttggggtcattgatgtctcatgttctagaccactttcgaggatttggatcaaacattactggtggataccgggcgggggcctatcatgtactacaccacggagcccgtgatgagcggcggccaaggcggcgtgggagtcggatacagcggagcacggcgcggcgcggcggccgggcagtggaggccagtgggcagaggcgaggaggaggaggaggaggaggaggagttggtggtggacgaagcgtcgtcgacgtggtcgtggacgaagctcgtgggccgtctcctcggagtggtcggaggcggggcgccgtccaactccgtggccgcgcagccgaagaagaagaaggacaagacggtgcgcgcgccggagccgtacaacctctacgagcagggcaccggcttccgcaacgcctacggatccagcgtcgccgtcgacaagcacgactacgagcccctcggccactccgacatcggcgtctatctcgtcaacctcaccgccgtatgcaaccttgccctcttcttcctcatacgcatacgtactcttgtctgcagcctctgtactactacagatttgacacggcgatcgttgcatatgcgttgcgttgtcgcagggatcgatgatggcgccgcacgtgaacccgagggcgacggagtacggcgtcgtgctcagcgggacgggctgcatcgaggtcgtgttcccgaacgggtcgaaggcgatgagcgcgacggtgcgcgccggcgacgtgttctacatcccgcgctacttcccgttctgccaggtggcgtcgcggggcgggccgttcgtgttcttcgggttcacgacgtcggcgcggcggaaccaccctcagttcctcgtcggcggctcctccgtgctccgcgccctgctcgggacggagctcgccgccgcgttcggcgtcccggagaaggcgatgaggaagctggtgctggcgcagaatgaggcggtgatcctgccgtcctggccggagaagaagaagaagaagaagtgggaggaggagcccgaggacgagaggtgggaggagaagaagaaggcggcgaagcagaggaagccatgggttatcgagcaggtgccggcgaagtagtaactaagcccgcgtaagctagctgcttaactctgattaagcatgtgagctatctatcaatccatgcttaggtatgcagctggttaactttgttttgctgtccaaacttttgtaaccatgggcgtgtctgctcaacttatgtttgcgctcttcgtgttgcttcggcgtcgcgttaataaataaagatgcttctgctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0336100, RefSeq:Os03g0336100