Os03g0336400

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0336400| Description = Similar to Alpha-expansin OsEXPA4| Version = NM_001056576.1 GI:115452880 GeneID:4332763| Length = 1284 bp| Definiti...")
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Gene Name

Os03g0336400

Description

Similar to Alpha-expansin OsEXPA4

Version

NM_001056576.1 GI:115452880 GeneID:4332763

Length

1284 bp

Definition

Oryza sativa Japonica Group Os03g0336400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12521305..12522588

Sequence Coding Region

12521692..12522335,12522450..12522585

Expression

GEO Profiles:Os03g0336400

Genome Context

<gbrowseImage1> name=NC_008396:12521305..12522588 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12521305..12522588 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccacccctgctcctcctcctcgcttctctcctcctcgtcgcagcgcggcgagccctcggcctcggcctcggccagtggcagcccggccacgccacgttctacggcggcggcgacgcctccggcacgatgggtggcgcgtgcgggtacgggaacctgtacagccaggggtacggcacgagcacggcggcgctgagcacggcgctgttcaacaggggcctgagctgcggctcctgctacgagctccggtgcgcgggcgaccaccgccggtcgtgcctccccggcggcgccaccgtgacggtgacggcgaccaacttctgccccccgaactacgcgctcccgagcgacggcggcggctggtgcaacccaccgcggcggcacttcgacctcgccgagccggcgttcctccgcatcgcgcggcacgccgccgggatcgtcccggtctccttccgccgcgtggcgtgcgccaggaagggcggcgtcaggttcaccgtcaacggccacgcctacttcaacctggtgctcgtcaccaacgtcggcggcgccggcgacgtgcgctccctcgccgtgaaggggtcggggtccgggtcgcgcgtgggggggcggtggcagccgatgtcgcgcaactgggggcagaactggcagagcaacgcgtacctcgacggcaaggcgctctccttccgcgtcaccgccggcgacggccgctccctcacctgcgccgacgtggcgcccgccggctggcagttcggccagaccttcgagggcaggcagttctag</cdnaseq>

Protein Sequence

<aaseq>MAPPLLLLLASLLLVAARRALGLGLGQWQPGHATFYGGGDASGT MGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTV TATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKG GVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSN AYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF</aaseq>

Gene Sequence

<dnaseqindica>254..897#4..139#ccaatggcgccacccctgctcctcctcctcgcttctctcctcctcgtcgcagcgcggcgagccctcggcctcggcctcggccagtggcagcccggccacgccacgttctacggcggcggcgacgcctccggcacgatgggtacgcactggcgcacactgacactgacagtctgacacagatggcggcttagcttacctatgatgtcgccgctcatggcgccgccgccgcgcgcggccggtcttgtcggtgcaggtggcgcgtgcgggtacgggaacctgtacagccaggggtacggcacgagcacggcggcgctgagcacggcgctgttcaacaggggcctgagctgcggctcctgctacgagctccggtgcgcgggcgaccaccgccggtcgtgcctccccggcggcgccaccgtgacggtgacggcgaccaacttctgccccccgaactacgcgctcccgagcgacggcggcggctggtgcaacccaccgcggcggcacttcgacctcgccgagccggcgttcctccgcatcgcgcggcacgccgccgggatcgtcccggtctccttccgccgcgtggcgtgcgccaggaagggcggcgtcaggttcaccgtcaacggccacgcctacttcaacctggtgctcgtcaccaacgtcggcggcgccggcgacgtgcgctccctcgccgtgaaggggtcggggtccgggtcgcgcgtgggggggcggtggcagccgatgtcgcgcaactgggggcagaactggcagagcaacgcgtacctcgacggcaaggcgctctccttccgcgtcaccgccggcgacggccgctccctcacctgcgccgacgtggcgcccgccggctggcagttcggccagaccttcgagggcaggcagttctagattagtttagccaagaggattattatctcttaattcttactagtatcttttgagtttaattgcacacccaatcggtgtttagtgaggtctagtcgtctagtagatgctgaggttgctgtggctcctgcaagagaaggcaaggcatttcgcgcccgcgtgtcagaggccggatggtttgcagtttgctgctctgctcttagttcagatttgtacagggcatgtggcatgagtaaatgagttgattagttaggtccagagagtggctggctatagtgcgagcggtgatcggtgagccagcctctctgaaaaagagtgagctgtctgtacaaatgcagttgcttgtttgctactcactccatttaaaatatagcaatttatattatttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0336400, RefSeq:Os03g0336400