Os03g0336500

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Revision as of 12:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0336500| Description = Appr-1-p processing domain containing protein| Version = NM_001056577.1 GI:115452882 GeneID:4332764| Length = 2119 b...")
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Gene Name

Os03g0336500

Description

Appr-1-p processing domain containing protein

Version

NM_001056577.1 GI:115452882 GeneID:4332764

Length

2119 bp

Definition

Oryza sativa Japonica Group Os03g0336500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12530016..12532134

Sequence Coding Region

12530118..12530246,12530823..12530871,12530956..12531058,12531161..12531256,12531355..12531429
,12531529..12531598,12531803..12531886

Expression

GEO Profiles:Os03g0336500

Genome Context

<gbrowseImage1> name=NC_008396:12530016..12532134 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12530016..12532134 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgcgccggggcgaggcggcggcgaggcgttccgtctgtcggcggatgcgggcgcgggcgcgctcaagctgcagaagggcgacatcaccctctggtccgtcgacggcgccaccgacgccatcgttaatgctgctaatgagcgaatgctaggaggtggaggtgtagatggagctatacatcgaactgctggacctgaactcgtagaggcatgccgtaaagttccagaggtcaaatctggagttcgctgccccactggagaagctaggattactccagcattcaagcttcctgtttcccgcgtgatacacactgttgggcccatatatgatatggacaagcaacctgaggtctccttaaataatgcctacacaaatagcttgaagctcgctaaacagaatggtattcaatacattgcattacctgcaatttcttgtggtgtttatcgttatcctccaaaggaagcatcgaagattgctgtttctactgcacaacgattttctaatgatattaaagaggtacactttgttctgttttctgatgagctctatgatatctggcgtgagactgccaaggaatttctgtcacaatttgagaaatga</cdnaseq>

Protein Sequence

<aaseq>MAAAPGRGGGEAFRLSADAGAGALKLQKGDITLWSVDGATDAIV NAANERMLGGGGVDGAIHRTAGPELVEACRKVPEVKSGVRCPTGEARITPAFKLPVSR VIHTVGPIYDMDKQPEVSLNNAYTNSLKLAKQNGIQYIALPAISCGVYRYPPKEASKI AVSTAQRFSNDIKEVHFVLFSDELYDIWRETAKEFLSQFEK</aaseq>

Gene Sequence

<dnaseqindica>103..231#808..856#941..1043#1146..1241#1340..1414#1514..1583#1788..1871#acgccgtcgcggctcccactcccactccctctcccactcctccccaagcggcggcggcggcggccgccaccgagcagcggcgcgacgagggcatcgttcgccatggcggccgcgccggggcgaggcggcggcgaggcgttccgtctgtcggcggatgcgggcgcgggcgcgctcaagctgcagaagggcgacatcaccctctggtccgtcgacggcgccaccgacgccatcgtacgtccctccttccttccttccttgttaattcgttccctccctcgatccttgccgatgcttgtgttcccggcgaaggagtggttcgaatctgatgctgctcgtgtgaatttggtgggattagtgcgcatggccacacattcgtgtctaggttcgagccatgctaggagactgttctggtgagctgaaactcgcccgggatatcaaatccgcgcgtgttttacgagaatcacgaccactcagggttgtgtgcttttgccgttttatctaggaagtcagtgtgacaattcaagaaacgaattctgggtcgcgagtaatgggttgttagttgtcagacacaattctagtgttatatccgcatgaatttgcatcactctctggttattctgtttcttggatccatggtgtgtcatttgtgctacagtgcgacaatatgcaggatgctgttttgtgtttgactttctctaatcttcattttttctagaaaatatttgcaaaattgttaaagcaataatctctaactctgactatctgagtatgacgatgaagaagatgacagttattcatatttctcaggttaatgctgctaatgagcgaatgctaggaggtggaggtgtagatggaggtgattgaatgcagctactagtgagctatcatttatctcatcaccgattgactatctcatacaaacttaaaattctcattgtagctatacatcgaactgctggacctgaactcgtagaggcatgccgtaaagttccagaggtcaaatctggagttcgctgccccactggagaagctaggattactccgttagtgcctttcccttaatcaatctgactgatggcatcagaatgccatcttctgaacaccacatatctctatatcattacctgtatgttgaatgtgaacagagcattcaagcttcctgtttcccgcgtgatacacactgttgggcccatatatgatatggacaagcaacctgaggtctccttaaataatgcctacacgttagtcgtcctttctaaattgtatagtattacaagaaaatttgtggttgcctgcaaaatcagtgaaataactgttccgattgatgtgctaactgcagaaatagcttgaagctcgctaaacagaatggtattcaatacattgcattacctgcaatttcttgtggtgtttatcggtatgtgctattggcattttcctttgacttacctagtcattgtgtaagtcctatgcgtcatttgatttgtcaatatcttcatgacttaactcaatgcagttatcctccaaaggaagcatcgaagattgctgtttctactgcacaacgattttctaatgatattaaagaggttagcagtggtcctgttttctaagttatcacttttcacttttcagtatgaagttgttgtggttttgaatttgtaatcaagtccaatattaaaggtgttttgatcatcttcatagttttttcaccgtagttgttattacctctattagtcgttattacctcaattaaacatttgaatcactgttggtatgaatttttcctgcaggtacactttgttctgttttctgatgagctctatgatatctggcgtgagactgccaaggaatttctgtcacaatttgagaaatgaattgtgaactgtgatgaggcttacttcctggtgtaagtctggtgccgaccgtgccgtagttgccgtcgttaatatgagcactagagccggttggccatgataaaacctgtatctgtatgacagtatgagttgcttagtggtgaatggatatgccctgaatggcatatttatcaaaataaaggtttcatctctgaattatgctaattaacatacttgtactcgaaaaccaataaccatgtcttatcgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0336500, RefSeq:Os03g0336500