Os03g0343700

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Revision as of 12:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0343700| Description = Brix domain containing protein| Version = NM_001056614.1 GI:115452956 GeneID:4332803| Length = 2995 bp| Definition ...")
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Gene Name

Os03g0343700

Description

Brix domain containing protein

Version

NM_001056614.1 GI:115452956 GeneID:4332803

Length

2995 bp

Definition

Oryza sativa Japonica Group Os03g0343700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12854140..12857134

Sequence Coding Region

12854225..12854242,12854353..12854595,12854709..12854939,12855061..12855153,12855238..12855425
,12856376..12856569,12856667..12856782

Expression

GEO Profiles:Os03g0343700

Genome Context

<gbrowseImage1> name=NC_008396:12854140..12857134 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12854140..12857134 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgagtccaccacaagaacggtcgcggcggcggcggtggcggcggcggtggcaagggcaagggcaaaggcaagtggaagatgccggcgtcggtggcgcggaagcagcaggcagcgatggcgaacgtggaccaggtcactggcgacaagatccccaagagcttcgtcttctcccgcggcaagctgccctccacgctccgccatctccagcaggatctccgcaaggtcatgctcccctacaccgccctgaatctcaaggagaagaaacggaacaacctcaaggatttcgtcaacgtctccggcccgttgggcgtgacgcatttcttcatcctcacgaaccccaagagctcgccgcacttgcgcatggcgaagacgccgcagggtcctacctacacatttcagataaaggagtatgctctcgccgccgacattgcgaactcacagaagcgaccgaggtgtcccccagagatattcaagaattcacctctgactgtactcagtggctttggcggtcttggcgagcctttcaagagtttggtcgaatattttcggcatatgacccctgctattgatccagtcactgttaagctgtcaacctgtcaaaggattctgttgatacatttcgacagagaaaaggaaatgatcaatttcaggcattactccatcaagctccagcctgttggggtcacccgcaagattagaaagctcatgcagaacaaccaagtgccagacctaagggacctgaacgacgttagcgattatgtgacaaaagctggatacggatcagaaagtgaagtggatgatgaagcagcaactgtaagtctagccagtgatgttgacaaattaaaccgagcatccagaaaaagcgccatcagactccaggagatcggaccaaggatgaaactgcacttggttaaagttgaagccgggctatgttcaggagatgtgctataccctcaacctgtaggcaaagaagggttggggaagaagggaaaagaagtcgaggaagagacagaaggacaagaagatgaggacttaatggagtcggatgatgaccccgaggatgaatcagaggagtaa</cdnaseq>

Protein Sequence

<aaseq>MARVHHKNGRGGGGGGGGGKGKGKGKWKMPASVARKQQAAMANV DQVTGDKIPKSFVFSRGKLPSTLRHLQQDLRKVMLPYTALNLKEKKRNNLKDFVNVSG PLGVTHFFILTNPKSSPHLRMAKTPQGPTYTFQIKEYALAADIANSQKRPRCPPEIFK NSPLTVLSGFGGLGEPFKSLVEYFRHMTPAIDPVTVKLSTCQRILLIHFDREKEMINF RHYSIKLQPVGVTRKIRKLMQNNQVPDLRDLNDVSDYVTKAGYGSESEVDDEAATVSL ASDVDKLNRASRKSAIRLQEIGPRMKLHLVKVEAGLCSGDVLYPQPVGKEGLGKKGKE VEEETEGQEDEDLMESDDDPEDESEE</aaseq>

Gene Sequence

<dnaseqindica>86..103#214..456#570..800#922..1014#1099..1286#2237..2430#2528..2643#aaccagaattctccagagcttcgctcagctcctctccccttctccctctccctctccaggcgctgctgctccgcgaaccctagccatggcgcgagtccaccacgtgagcgctcctcccctctcgatcccatcccccaaatctccgtgcatcgtttgcttgaatcgttgttcggtttcactcacccgtgttcttttttcctcgcgcgggagcagaagaacggtcgcggcggcggcggtggcggcggcggtggcaagggcaagggcaaaggcaagtggaagatgccggcgtcggtggcgcggaagcagcaggcagcgatggcgaacgtggaccaggtcactggcgacaagatccccaagagcttcgtcttctcccgcggcaagctgccctccacgctccgccatctccagcaggatctccgcaaggtcatgctcccctacaccgccctgaatctcaaggtcccccatcctcacacttcgcatctattgtttgtttgagatatcttctttgggcgtggtcacgagccgcaatttttttttggtgttttcccccatttgaaacaatctaacaggagaagaaacggaacaacctcaaggatttcgtcaacgtctccggcccgttgggcgtgacgcatttcttcatcctcacgaaccccaagagctcgccgcacttgcgcatggcgaagacgccgcagggtcctacctacacatttcagataaaggagtatgctctcgccgccgacattgcgaactcacagaagcgaccgaggtgtcccccagagatattcaagaattcacctctggtatatatatgccgtggctttgttttttcccccccttgtttgggaggtgttatgattgttattgttaggatgcttcttgggggcattgtgatagcatttgtgtggaatcatggtttggcagactgtactcagtggctttggcggtcttggcgagcctttcaagagtttggtcgaatattttcggcatatgacccctgctattgatccagtcactgtaagtagcggatgtcatcttcgtgctagaacttaattgtcttctttctagcatagtaaaatgattttatattttacatgacaggttaagctgtcaacctgtcaaaggattctgttgatacatttcgacagagaaaaggaaatgatcaatttcaggcattactccatcaagctccagcctgttggggtcacccgcaagattagaaagctcatgcagaacaaccaagtgccagacctaagggacctgaacgacgttagcgattatgtgacaaagtaagaaacaacttctcttttaaattaactgtaatgggatattgtgaaacatgtggtaaatatgtcaacattatgctgctgtgatcagttgttaataaaacactgttaaggataaatgcaaatagagactcaaatttaacaggaaaccttcaatggttaagtaggttaaatgctctgtgtgtagcatccaggacctacatatagaatatgagaattccaatttgtcctttgagcaatgaaggattggttactgtgatattaccagaccaagatattttttataagttgctttttcagctgaattcttctgcactcttggacccgtaatattttccctcccaaatattcagtgtagaaacagtggaacatggaagcatacttattagccatcattgaacccatcccccctccctaggtctcctcctcgcagttagatttaaacgcacttaagagatttaaagcacatctatccactgttctattaccacaattctctgataatggaaatgaatatattctaggtgtttgttatctggctttctgggtacttttattaatggaaatcaacaaaatggaattagttatacttgcacctgtttattactacttcctccgtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatctagacatatatatcgatttagattcattgacattaatatgattgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatattgtagccatactccataatcatttgccttgttaatttgtatgtttaccttcatgtagataatggatactgttcaaatatatagtatggtgtgttgtgtcttttactgaaaatcaacacttcaaattcctgtagtccctcatgtttaatttgtataatgttcctcgtttgtgtacttctctgtttgccagagctggatacggatcagaaagtgaagtggatgatgaagcagcaactgtaagtctagccagtgatgttgacaaattaaaccgagcatccagaaaaagcgccatcagactccaggagatcggaccaaggatgaaactgcacttggttaaagttgaagccgggctatgttcaggagatgtgctataccctcaacctggttagtttactacctgccgtggtgcttcgcagagattcatgtgaaatatgtcttctctgttttttctctttagctaatttttgctctcataatacagtaggcaaagaagggttggggaagaagggaaaagaagtcgaggaagagacagaaggacaagaagatgaggacttaatggagtcggatgatgaccccgaggatgaatcagaggagtaatctggaaggaattaaggaagcaatgaagcactaggcgaccaacctacggggatctccaacaatgtgaagcctccactgtcttgcaacactattaagcgcttggtttatccttgtggcaacacagctgaaggagaggatgcaaaagataaccctgtgtatgttttcttcgggtaaaacaataggcctttagagatgtaacatgctttcgttcatcccaattttgtgatatggtctgcagattaagcatagcgtacagatcacaagagttactaactactgttgtgagaatgaacataatttggccgtgatgtgtttcagggtcccagtaagatgaccaaagttcttttttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0343700, RefSeq:Os03g0343700