Os03g0345100

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Revision as of 12:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0345100| Description = Rad9 family protein| Version = NM_001056622.1 GI:115452972 GeneID:4332812| Length = 4059 bp| Definition = Oryza sat...")
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Gene Name

Os03g0345100

Description

Rad9 family protein

Version

NM_001056622.1 GI:115452972 GeneID:4332812

Length

4059 bp

Definition

Oryza sativa Japonica Group Os03g0345100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12917229..12921287

Sequence Coding Region

12917442..12917566,12917667..12917707,12918781..12918928,12919197..12919423,12919496..12919560
,12920067..12920182,12920289..12920546,12920712..12920768,12920817..12920970
,12921083..12921175

Expression

GEO Profiles:Os03g0345100

Genome Context

<gbrowseImage1> name=NC_008396:12917229..12921287 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12917229..12921287 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggcggcgcgctgcggacgttcacgcggtgcgtcacctgcctcgcgcgcgtcggctccgacctcgtcctccaggcccaccccgccaagcttgagctgcacacgctcaacagctcgcggtcggcgtacgcgtccatctcgctggcgcgggacttcttcgacgagttcagcctctccgccgccgccgccgccgactcggcgccgtcgtcgacgccgctccagtgcagcgtcctcctcaagtccgcctccctccccaaccccgacgcgcccaagctccagctcaccctccactgcctcaacggggtgaagaagacgtactggatcgcgtgcagcgcggagtccgaggtgcagacgctggcgctcgaccgcagcaacttctccagccgcctcgccatccggccgcgggacctggcgcgcctgctctccaatttccagtcctcgctgcaggagctcacggttattgccaccgatcctgctgctgggctctccaacgtcggcgtggatggtgagattgaggggaaggctgtcgagctcagaagctacattgacccgacgaaagatgactgcgatacgaggctgcacacgcagctgtggattgacccaacagaggagttcgtggagtatgtacattccggtgattcagtggatgtcacattcggggtgaaagaactcaaggctttcttaacattttgtgaaggatgtgaagttgatatcctcctattctttcagaaggctggcgagcctgtccttttggttcccaaatttgggcttgacgatggatcaagttctgattttgatgcaacactagttcttgccactatgcttgtatcacaacttactgacagcagtgttgcccaacagccaactacttctgcacagcgagcagaagaaccaagggttgctgctacaccaccaccagtccctgaaaatgtctcaaaccatactaaaatatggtcggagctatcaggtagtgctcccaaaagttttgaagttaacagagaaaaatacacccagaaggagagaaatgccaattctaatgcactgaatgacacatcaatgctgcatagtgtaaatgctcgctacaagccaccagtcgctgataatgcaaacgatacaatgcagcctatgcaaatggatcacttggaagagcctcctgatgttgtcagtgataatcctcgatcacagcatcacccaagcaattgggtaggtgctgatgaagatgacgatgatgacgaagatgaggagcttttcgtccaaacaacaccgcactacatggactag</cdnaseq>

Protein Sequence

<aaseq>MSGGALRTFTRCVTCLARVGSDLVLQAHPAKLELHTLNSSRSAY ASISLARDFFDEFSLSAAAAADSAPSSTPLQCSVLLKSASLPNPDAPKLQLTLHCLNG VKKTYWIACSAESEVQTLALDRSNFSSRLAIRPRDLARLLSNFQSSLQELTVIATDPA AGLSNVGVDGEIEGKAVELRSYIDPTKDDCDTRLHTQLWIDPTEEFVEYVHSGDSVDV TFGVKELKAFLTFCEGCEVDILLFFQKAGEPVLLVPKFGLDDGSSSDFDATLVLATML VSQLTDSSVAQQPTTSAQRAEEPRVAATPPPVPENVSNHTKIWSELSGSAPKSFEVNR EKYTQKERNANSNALNDTSMLHSVNARYKPPVADNANDTMQPMQMDHLEEPPDVVSDN PRSQHHPSNWVGADEDDDDDEDEELFVQTTPHYMD</aaseq>

Gene Sequence

<dnaseqindica>3722..3846#3581..3621#2360..2507#1865..2091#1728..1792#1106..1221#742..999#520..576#318..471#113..205#ggtttccctccccccgagtcgaggcgagctgagacgaagcgcggcggcgcggggaagcggttgcggcggcgaccggcggcgggcgggcgggcgggcggcgatggagctgtctatgagcggcggcgcgctgcggacgttcacgcggtgcgtcacctgcctcgcgcgcgtcggctccgacctcgtcctccaggcccaccccgccaaggtggtcgccgccgccgcctgcctgcctctccgccgcggtttcctcctccattcgccggcggcgagctgttctgacattttctttgggggtgatttggtttctcctttttcagcttgagctgcacacgctcaacagctcgcggtcggcgtacgcgtccatctcgctggcgcgggacttcttcgacgagttcagcctctccgccgccgccgccgccgactcggcgccgtcgtcgacgccgctccagtgcagcgtcctcctcaagtccgtcctctccgtgctccgcacgccgaccgccgcgctcgaccgcatcgccgcctccctccccaaccccgacgcgcccaagctccagctcaccctccactgcctcaacggtactcgccgatccccctccgtcctctagggttttgcaattttgtgggggatttttgcgcgcaacatttttcttgccgttggcgcgcttttcttagttttgccgccatttttgctgtttttggcgagtgctcctgaatttctcatcaaaatttcgagctgttcaggggtgaagaagacgtactggatcgcgtgcagcgcggagtccgaggtgcagacgctggcgctcgaccgcagcaacttctccagccgcctcgccatccggccgcgggacctggcgcgcctgctctccaatttccagtcctcgctgcaggagctcacggttattgccaccgatcctgctgctgggctctccaacgtcggcgtggatggtgagattgaggggaaggctgtcgagctcagaagctacattgacccgacgaaaggtggcatctcatggtgtttgtaaactgtccttttttgtattatgaggtgatgattgggttgtggtattgtgaatgtgaattttctttgcactttgcggttatgcagatgactgcgatacgaggctgcacacgcagctgtggattgacccaacagaggagttcgtggagtatgtacattccggtgattcagtggatgtcacattcggggtgaaagaactcaaggtgatctatgatcagccctatcagtattttgtttcttcgaaaacctacattcaatagatgtaggacaaaaaacttctgataattatagaatggctcctttaaatgggaaataatttggtatttagcattcacctaattgaatcagagaatatttctttaagatcattatagaaagaataacgtaaataatatgtatccgtgtgtcagcatgcacagtactgaatgtatgtagagcttacaagttgcaagtcaatactcttgcttttccatcgaatacatgtaggttgcttccttgatgtagttttgttaattcttccgtctccttgctggactagaaggatgtggctttatggctagttgtattctgagtaattggtatagaatattcattgttttttaaactttactgctgaaactttaaggaaacaacttagttccctgctcaggtatttttatggcatgagactacatatattgtatttacttttctatctcttccaacccaggctttcttaacattttgtgaaggatgtgaagttgatatcctcctattctttcagaaggctggcgagtaagtagccatactggtttagttttattatccatttggattggaccttacaagtcttcatttgaattgcaggcctgtccttttggttcccaaatttgggcttgacgatggatcaagttctgattttgatgcaacactagttcttgccactatgcttgtatcacaacttactgacagcagtgttgcccaacagccaactacttctgcacagcgagcagaagaaccaagggttgctgctacaccaccaccagtccctgaaaatgtctcaaaccatactaaaatatggtcggagctatcaggtgtgtatttctgataaatggatcctgtcaactattggtatgatcacacaccaggcagggctttctgtgtggtactcaacgcaggaccaaagggcctgtacagtgcatattggctactttcggaaggccataattggactgtacgccatatgactgtgtgtgatcaaactaactggtggctggagaacttcatttctctctgattatagaattatcctgttgatatatcatcatgctagtcaaacataagaaagcttttgttaaacaggtagtgctcccaaaagttttgaagttaacagagaaaaatacacccagaaggagagaaatgccaattctaatgcactgaatgacacatcaatgctgcatagtgtaaatgctcgctacaagccaccagtcgctgataatgcaaacgatacgtatcctatagatcacttcaattcattctttctaatttatcctcttgtattatttgctactgcatcctattctgcagttgcagctttatatcttgtatatttcttacgactgtgaccttccaatgtgttcatcagacatcagacatattaacagcagtccttaactctgttctctctgtccaagtaaattaagtctggacttaaaaaataaatttctttaatcgggattatgatatcattatggattatgatatcattatggtattatatacttatgtctttctctcaatccaaagaaattaaggctgcatgcgagaatttttctttagttgggattgtgagatcagcatccctcaacacaaaatgcttccttccaacattatatcaatagacagaacagaacctgtgtccacttgcctatattccccatggtaaatacttcctccgtttcacaatgtaagtcattctagcatttttcacattcatattgatgttaatgaatctagacatatatctatctagactcattaacatcaatatgaatgtgggaaatgctagaatgacttacaatgtgaaacggagggagtatgtatttattgcaattcatctagttaaaaccataagacactttcagtgataatgttaaggttagtgttaggagtcaacttacagtcaatcagtcatactgtatttgatctgactaatctgcatgaatatagatatatacagtgtcagagggagatagattgtggttttcttagacacaatgccaggccctgaggtccatagaaaatcttgcatacaattctatagggaatagttactaaggaaaacattacatcaatggagagaacagagcattacaatcctatagggaataatatggcaattaggtcctagtattgagcatttgttactgcacagaactgatgtattatgtcaagatagttgatgttcatgtagagttttccatatgttgttaataatgaaagaggatccacgaggtctgagtttcgagttatttctgctttcctacttccagaatgtatttccttgactagtttgtactacagaatgcagcctatgcaaatggatcacttggaagagcctcctggttaatatcacaacataaaacacatcatattttgaagtcgtctgttactgatgcatttatattacaatatatctaaataacttgctttattttgttgtagatgttgtcagtgataatcctcgatcacagcatcacccaagcaattgggtaggtgctgatgaagatgacgatgatgacgaagatgaggagcttttcgtccaaacaacaccgcactacatggactagggatcgatgctgatccttatactttaggtacatatcaggctatcagcccgatgcaaagagaatggactagaaactagttaagtacctttctctttgctcttagttctttcaggcctgaagttaacacagaatatgttaatctttttaacaatgtgacttgtttgtatccgatgtggctatggcatttctcatagtgcagagattttttttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0345100, RefSeq:Os03g0345100