Os03g0349200

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Revision as of 12:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0349200| Description = Similar to Cyclin-dependent protein kinase-like protein| Version = NM_001056643.1 GI:115453014 GeneID:4332836| Lengt...")
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Gene Name

Os03g0349200

Description

Similar to Cyclin-dependent protein kinase-like protein

Version

NM_001056643.1 GI:115453014 GeneID:4332836

Length

4825 bp

Definition

Oryza sativa Japonica Group Os03g0349200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13162911..13167735

Sequence Coding Region

13163315..13163593,13163882..13163996,13164910..13165010,13165665..13165892,13166564..13166881
,13166975..13167295

Expression

GEO Profiles:Os03g0349200

Genome Context

<gbrowseImage1> name=NC_008396:13162911..13167735 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13162911..13167735 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gctcatcaacagcgcgcggtgttgtcggtggcgcagatcgggcaggggacgtacagcaacgtgtacaaggcgcgggacacggcgacgggcaagatcgtggcgctcaagaaggtgcggttcgacaacctggagcccgagagcgtccgcttcatggcccgcgagatcctcatcctccgccgcctccaccaccccaacgtcgtcaagctcgagggcctcgtcacctcccgcatgtcctgcagcctctacctcgtcttcgagtacatggagcacgacctcgccggcctcgccgccagccccgacatcagcttcaccgagccacaggttaagtgctacatgcaccagctgctgtccgggctggagcattgccacaacaatggagtgctgcaccgcgacatcaaggggtcgaacctgctgttggataacaatggcatgctgaagatcgcagatttcggcctggcgtcgttgttcgatcccaacaagaatcagccgatgacgagcagggtggtgacgctgtggtaccgcccaccggagttgcttttgggctccacggattatggggtgggcgttgacctgtggagcgcggggtgtattctagccgagttgttggctgggaggcctattatgccaggccgtactgaggtggaacagctgcataaaatttttaagctgtgcggctcccccacagaagaatattggaaaaagtccaagctacctcatgcaacaatatttaagcctcaacaaccatacaaaaggcgaatatcagagacttacaaagattttccacagtcagcactgcgattgattgaaacactgctcgcaattgatccagctgatcgtttaacagcgacttctgcattaagaagtgatttctttacaactgaaccttatgcatgtgaaccatcaagtctcccagcatatcctccaagcaaagaaatggatgcaaaacgaagagatgaagaagccagacgtttgagagctgctggcggtaggactaatgatggagctaagaagacaaagacgcgcgatcgacctagggcagtaccggctccagaggcaaatgctgaacttcaaataaatatcgataaaaggagattagtaacacatgcaaatgcaaaaagcaagagtgaaaagtttcctcctccgcatcaggatggtgcggtctctttggtttctacaaatcacatggacccgttatacgaaccccaagatccctcttcgtttagcactgtatttacacaagagaaaagctctgttcctacttggtccggtcctttggctgatctctctgcagttgggaaacagaaatggaaacacaagtttggccgctcatcaaaacaaccatccactgcccgtgctcggtaa</cdnaseq>

Protein Sequence

<aaseq>AHQQRAVLSVAQIGQGTYSNVYKARDTATGKIVALKKVRFDNLE PESVRFMAREILILRRLHHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPDIS FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLLDNNGMLKIADFGLASLFDPNK NQPMTSRVVTLWYRPPELLLGSTDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLH KIFKLCGSPTEEYWKKSKLPHATIFKPQQPYKRRISETYKDFPQSALRLIETLLAIDP ADRLTATSALRSDFFTTEPYACEPSSLPAYPPSKEMDAKRRDEEARRLRAAGGRTNDG AKKTKTRDRPRAVPAPEANAELQINIDKRRLVTHANAKSKSEKFPPPHQDGAVSLVST NHMDPLYEPQDPSSFSTVFTQEKSSVPTWSGPLADLSAVGKQKWKHKFGRSSKQPSTA RAR</aaseq>

Gene Sequence

<dnaseqindica>4143..4421#3740..3854#2726..2826#1844..2071#855..1172#441..761#atgcgccgccgccgccgccggtgaccccccgactcccctcccctcccatgggctgcgtccacggccgcccctccgccccctcccccgaccacccccagcagcccgaccccccgcccccgcccgccgtcgccgccgagaaggcggcggccgaggaggaggaggaggaggaggaggaggagaagaagccgccgaagccggccaggagggagaggcgcgcacggtcgtcgcggtccgccgcggaggcggcccgcctcgggctcggggggagcttcgccaacagggcgcgcggggagcaggtggcggccggctggcccgcctggctctccgccgtcgtcggcgaggccatcgacggctggacccctcgccgcgccgactccttcgagaagatcgacaaggtacgagctccccccgccctcgcgctcgccattgtcgcgagctgagctcatcaacagcgcgcggtgttgtcggtggcgcagatcgggcaggggacgtacagcaacgtgtacaaggcgcgggacacggcgacgggcaagatcgtggcgctcaagaaggtgcggttcgacaacctggagcccgagagcgtccgcttcatggcccgcgagatcctcatcctccgccgcctccaccaccccaacgtcgtcaagctcgagggcctcgtcacctcccgcatgtcctgcagcctctacctcgtcttcgagtacatggagcacgacctcgccggcctcgccgccagccccgacatcagcttcaccgagccacaggtctccccccgccaagatctttgtgcagcctcatgttccagcacgcaatgtcgtgaaattaattgaggttttccatggcatgctgacatgcaggttaagtgctacatgcaccagctgctgtccgggctggagcattgccacaacaatggagtgctgcaccgcgacatcaaggggtcgaacctgctgttggataacaatggcatgctgaagatcgcagatttcggcctggcgtcgttgttcgatcccaacaagaatcagccgatgacgagcagggtggtgacgctgtggtaccgcccaccggagttgcttttgggctccacggattatggggtgggcgttgacctgtggagcgcggggtgtattctagccgagttgttggctgggaggcctattatgccaggccgtactgaggttagcaacagcatgctgatttgtctaattatcagtttgaaatgccttgaaacagtattcaatttggtcggaggccttggagtgctaaactagtttcaatttaggtaaacatagtggttgataaaaccagtagcttttcatgtggaaactggaaacgttgctctaccaaaagttctaactttatctgtagtaccacatgttcaacgtattacacttttaggcccccttcggtttgtaggaaaaacataggaaatatggaggatttcgatcctattggaaaaaatcctaggaaggcatttgaaacaaaggattaaatcctatcttttcctttgaaattcctatggaatgtacaatcctatggagatttcggaggaaaattagcaagagctccaacctcttggaaaatttctttttgattctatctcactcatctgattcccgtgttttgcaatcttgtgactttcttattccttcgttttttcaatcccgtgttccaaaggaacccttattttgtactatattttttattcgtacttgagattatgctagatccaatatgacctgttgcactgttcatgcacgtaatgttgttcattccagccaatctaatgaatgccaattgtatttatgttccatgtttatttaatttaataatcatctgtcccttttaggtggaacagctgcataaaatttttaagctgtgcggctcccccacagaagaatattggaaaaagtccaagctacctcatgcaacaatatttaagcctcaacaaccatacaaaaggcgaatatcagagacttacaaagattttccacagtcagcactgcgattgattgaaacactgctcgcaattgatccagctgatcgtttaacagcgacttctgcattaagaagtgatgtaagttggctttggtgtcttacgacacagtttgaagttctgaaatctgcgattctgtgtttgcctcaaagtcattgccctctataagcacaatatttttagaaaatcttgggtgtaggtgatttacgttttcattgcaataacttagtttgcaattggggtttcagaacatggtgctttggctagattttgttctgggtagctactagtgtagatttagccaatatccaataatttacttgcaagcattatgaccactatattttttctgcatcctatcccatattccaagaagtatgacatgactaattcttttgtgcaatatgacactatgatgcttgtgatctcatttggaccattgtatcttatttagaggtggctgcaatttaggccttctatttgcttaataaagtatgattttttgatttataaagagcatggaagcatcttcctaccagatattatcaatctaggctatagtagcactctataactgcaagtctgattttcgaatttcaatagcatacatttggtttgaatgacatatctcactggataatgtgtgaagtagatctgtttattgtcatctttgttgaaattatgtagcattgttttacacttttactaaagaattgcttattacaatctatgcagttctttacaactgaaccttatgcatgtgaaccatcaagtctcccagcatatcctccaagcaaagaaatggatgcaaaacgaagagatgaagaagccagacggtttgtcaccttgatactcattagttttattatttgtttgttattcgctttggtccttggctgtctctctagtactggacactctgtggttgtagcactttctttttaaattggcatttgagaaatagcatctttaactttaaacatataactgttgcttatcaaatggcacattatttttctggggacctaggttggatacttgagtgcttgctcgggtttaatacctacgacaagaaaaaacatgtatttattctaatatttgggtatgcatatggaatagttcaataaactaaaaacaatttcactattttcgaaagaaacatttgtacaaagtgctgtcttcagataacagggccactctctctttcttttgttttttttataaaaagaatggaagccactctcttttgtcggattacaagaaaatgactaataagtgctaaaacagtaaagttcaccaaaagtttgttgatatttggtattaatatggatgtttttttttcccgtaagcaatattattagcatagaaatatatcctaaagagatggcacacaatgttcatgcagcaaagttatatataatcaaattatgaaagcattgcccaaatgtaattttagtgcaatgcaagtgctgatttaggtgaaactttaagtagacatactgctgtggtactaatgtccctggatttcacagaatttgtctgacacatgcctcatcgttgggctgatagtcagtctctcaccatctgggctcagctatttagaatttttgctcactaagtgatccaaatgcccacatatcctagtatatttgatgtttgattcatgttttctgtccatgctctcatgtgagttgagcgtgtatagaaatatttgattgctacctgacctattcatggcatgatcaacagtttgagagctgctggcggtaggactaatgatggagctaagaagacaaagacgcgcgatcgacctagggcagtaccggctccagaggcaaatgctgaacttcaaataaatatcgatgtatgtgaacatacttgctccctgactaattccagtagtgttttagtttttgtttctttgagctgttttacttaaagactaggctagcgatctaaatttaaggtggaggtggtgaaaccacttgcttagtctcatctccgtcgcagtaacactttatcaccactttattttcttgtcttacctatactggtctcatttgatttactatggcccaaaatggagcccggcactctcttaatgtaaattttgcaatgtctctaatttgtcccatttatttatatcttacagaaaaggagattagtaacacatgcaaatgcaaaaagcaagagtgaaaagtttcctcctccgcatcaggatggtgcggtctctttggtttctacaaatcacatggacccgttatacgaaccccaagatccctcttcgtttagcactgtatttacacaagagaaaagctctgttcctacttggtccggtcctttggctgatctctctgcagttgggaaacagaaatggaaacacaagtttggccgctcatcaaaacaaccatccactgcccgtgctcggtaaggaaaaggaactgaagagtaatatttatagacagagtcttcagttatggagaaaatactcctcagcagctaccatgcgctgtttcgcaaacgaggcatgcgatgataacttgatttcttcttgacttattgtcattggattatttttcgaacatcggttgtataggctgtggagggagctcaggtagtttacctgtgtacattaggttctgtttttcaattcttatagccctggtgcatttggtgttagattcatttgagtggaagcttagatctctagcatttcaggacatccccttccattgtaacacctttcttcaattgcaacctgtgtaatcattcctcatcgatccaaagcaaatcttgtgttttgattggtctgttgcatggtgacctgaattttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0349200, RefSeq:Os03g0349200