Os03g0351800

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0351800| Description = Zinc finger, RING-type domain containing protein| Version = NM_001056655.1 GI:115453038 GeneID:4332849| Length = 208...")
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Gene Name

Os03g0351800

Description

Zinc finger, RING-type domain containing protein

Version

NM_001056655.1 GI:115453038 GeneID:4332849

Length

2085 bp

Definition

Oryza sativa Japonica Group Os03g0351800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13251225..13253309

Sequence Coding Region

13251405..13252256

Expression

GEO Profiles:Os03g0351800

Genome Context

<gbrowseImage1> name=NC_008396:13251225..13253309 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13251225..13253309 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaggaggtaggcaatcatactggtgctaccaatgtagacagcgggtgaggccccgcggccaggatatggagtgtccctattgtgattccggttttgtgtctgaaatggatgatgttgatgctctcatgcgccactttgttgggatggatcctgatttccatcgtgatccaagattcggtatcatggaggcaatctctgctgtgatgaggcatggcatggcgggaacgaaccgggaagttgatgtgagaggaaggccaaacatattttctgacctggagatggagtttggctcagggccatggttgctcttccgtggccagcttcctggtcatctctcagaagacaatggttttgatgtattcatcaatggacgccgtggtgttggcatgcgcagagcaaacattgcagactactttgttggacctggactggatgatctgattgagcaattaactcagaatgatcgacgagggccgccacctgccactcaatcatcgattgatgctatgcctactgtgaagattacacagaggcatctcagtggagactcacattgccctgtctgcaaggacaagtttgagctgggatcagaagcaagggagatgccatgcaagcatttataccactctgattgcatagttccttggctggaacagcacaattcctgccctgtttgccgatatgagttgccaccacagagctctactggtgctagctgctcgcgcacaagatcaaccaaccaaagtcagagttcaagtagcaatgggagaaccaatggacgtcaaaggagaaggaatccgttctcgttcctatggcctttccgatcatcaagctctagctctcgttag</cdnaseq>

Protein Sequence

<aaseq>MSGGRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALM RHFVGMDPDFHRDPRFGIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGSGPW LLFRGQLPGHLSEDNGFDVFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGP PPATQSSIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWL EQHNSCPVCRYELPPQSSTGASCSRTRSTNQSQSSSSNGRTNGRQRRRNPFSFLWPFR SSSSSSR</aaseq>

Gene Sequence

<dnaseqindica>1054..1905#ctcctcttcttccaatattattttttcgccttttctgttcgtgtgttcgtggtggagttcatctcgccttcccctcttccggtcctcccaccgctcctcgccaccacaaaccgccgccgcctcctcctctcctatctggtatcgtaatcgaaccagcggaaaccgctattcgtgtgcgtgttttttttctattcaatttgtttgctcgggccgcgtaatcttgggagttatctgcaatcagttttcttttctttctttttctttttttttttcattttgaatggagtgaatcgtgtggaaaaggtggctgttgtagagtttttagtcttaccatgaactgattgatctacgggcgagtgggaatttagcctgttcttggattttagcctggttgcagcatctagtgtaattgatccagtttgatttcttttttttttttgggaataaatcagtgtgaggcagcctatgaaccgaacataagtatctagtattagtctgtgagacaaactatccctggctctataagagggaaacctgatgtgtctgaaagaagttgcgagttcaagaattcctatctgaaaaaagcaaagatcaggcaaagatcatcagtttggatcatgtataaatttcccatgttgcagtatgtcttaattaggaggattattcattaacaaatgtcatgcgaaaaatttatatcttcggaaacaatcgctttatcattcatgagcgaattattacttcgattaggcggatttgtgataattgatgaataattctaagtaatccttgacagttcagtgatttggactggtactggatggtaggtgcccatctgtgtgcctttttgacttgtctatatgccttggtaccattgtgaaacttcatgtattcagtcttgttggattttgtaagttgcattggaatgatatgcttatgtaacattactagtggagctgttgccctgatatgttagaaattgtgccattttttgcagtgcggaggaggtataccacacctttggattttggggaagcagtacgttgattggaagaaatgtcaggaggtaggcaatcatactggtgctaccaatgtagacagcgggtgaggccccgcggccaggatatggagtgtccctattgtgattccggttttgtgtctgaaatggatgatgttgatgctctcatgcgccactttgttgggatggatcctgatttccatcgtgatccaagattcggtatcatggaggcaatctctgctgtgatgaggcatggcatggcgggaacgaaccgggaagttgatgtgagaggaaggccaaacatattttctgacctggagatggagtttggctcagggccatggttgctcttccgtggccagcttcctggtcatctctcagaagacaatggttttgatgtattcatcaatggacgccgtggtgttggcatgcgcagagcaaacattgcagactactttgttggacctggactggatgatctgattgagcaattaactcagaatgatcgacgagggccgccacctgccactcaatcatcgattgatgctatgcctactgtgaagattacacagaggcatctcagtggagactcacattgccctgtctgcaaggacaagtttgagctgggatcagaagcaagggagatgccatgcaagcatttataccactctgattgcatagttccttggctggaacagcacaattcctgccctgtttgccgatatgagttgccaccacagagctctactggtgctagctgctcgcgcacaagatcaaccaaccaaagtcagagttcaagtagcaatgggagaaccaatggacgtcaaaggagaaggaatccgttctcgttcctatggcctttccgatcatcaagctctagctctcgttagattagcctggtaatctggttggagtcctcaagactgtttaatcgaagatgctcataaaatgggtgttatgcatggcatcttatcgtccaatctgtaatgtatggcttgttatgatcaccacggaatgcttttccttgcaagtatatccttccacagcttcatatcagatacttcttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0351800, RefSeq:Os03g0351800