Os03g0361100

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0361100| Description = Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein| Version = NM_001056692.1 GI...")
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Gene Name

Os03g0361100

Description

Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein

Version

NM_001056692.1 GI:115453112 GeneID:4332889

Length

4815 bp

Definition

Oryza sativa Japonica Group Os03g0361100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14583514..14588328

Sequence Coding Region

14583514..14583631,14585971..14586280,14586738..14587118,14587206..14587424,14587515..14587650
,14587759..14588328

Expression

GEO Profiles:Os03g0361100

Genome Context

<gbrowseImage1> name=NC_008396:14583514..14588328 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14583514..14588328 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgagcaaggctgcagcagcgaaccagccgctggagatggacgctgtcgtcaatggcggcgccggctttgaccttagtagcgattcatacaagttaaatcttctaatcaatggttgtgaggagcggatgagggcgcgggcggagcggctcgccggggaggtgcgccgcaggatgttcgccgccggcggcggcaacggcgacggcgagggcggagttacgatgagcgtggccgaagcggcgacgctggtggacacgctcgaacgcctcggactagatgggcacttccggcacgagattggtgtgctgctggggcgtctccgccgcgaggaggcggattttgcaggcagcgacgacgacctgtatactgttgcccttcggtttcgtctgcttaggcagcatggggtctgggtatctgcaggtacatgtgttcgcgacaagttcagagatggtacatgtagtttcagctcaagcctacgtgatgacccgaggggcttgctgagcctgtacaacgcagctcacatggcagcacctgtagagatcgccctagacgacatcatcgccttcgcgaggtgccacctcgaggccctgtccatggaaggcgagctcaaatcgccattggctgagcaggtctcccgcgccccggacatcccactcccacggttcccaaggcggctcgagaccatgagctacctcgtcgagtatgagcaagaggacgaacacgacgacatgctgctggagctcgcgaggctagaattcgagctcacgaggtgtcttcaccttgaggagctcaaggctctctccttgtggtggagagagctttacgagagcgtgaagctgagctatgctcgagatcgcctagtggagtcctacttctggacatgcggcgtgttccatgaggaggaatactctcgtgcccggatcatgtttgccaaggtatttggattgctgtccctgatggatgatacctatgacgtccatgctaccttggaggagtgctataagctcaatgaagctatacagagatgggacgagggcgcgatttctattctgccagaatatttgcgcatgttttacatcaagctgctgagcaactttgacgagttggaggctagcttagaaccacacgagaagttccgcgtgtcctacgccaaaaatgcgtttaagctgtcgtctgaatactacctccgtgaggccaaatggtcgaacaccaagtacacgccgagcttcgccgagcacctggaggtgtccgtcatgtcgtcgggcttcccgatgctggcgccggtggtgctgatgggcgtgcacgacgacgccgccgtggcgaccgcggcggcgttcgagtgggccaccgccgccggcgtccccgacgtggtcatcgccgccagcggcgaggtggcgcgcttcctcaacgacatcgcgtcccaccgcgtggggaagaacgagaaggacgtgccgagctcggtggagagctacatggcggagcacggcgtcggcgaggaggccgccctcgcggcggtggcggcgatggcggagcacgggtggaggacgatcaaccgggcgttgatggagatggaccccgggctgctgccggcggcgcggctcatcgtgaacctgacgaggacgctggaggtgatctaccttggtggcagggacggttacaccttcggcggcgacatcaagggcctcgtcgtcagcctcttccttgatccggtcgccgttatacgtatttga</cdnaseq>

Protein Sequence

<aaseq>MAASKAAAANQPLEMDAVVNGGAGFDLSSDSYKLNLLINGCEER MRARAERLAGEVRRRMFAAGGGNGDGEGGVTMSVAEAATLVDTLERLGLDGHFRHEIG VLLGRLRREEADFAGSDDDLYTVALRFRLLRQHGVWVSAGTCVRDKFRDGTCSFSSSL RDDPRGLLSLYNAAHMAAPVEIALDDIIAFARCHLEALSMEGELKSPLAEQVSRAPDI PLPRFPRRLETMSYLVEYEQEDEHDDMLLELARLEFELTRCLHLEELKALSLWWRELY ESVKLSYARDRLVESYFWTCGVFHEEEYSRARIMFAKVFGLLSLMDDTYDVHATLEEC YKLNEAIQRWDEGAISILPEYLRMFYIKLLSNFDELEASLEPHEKFRVSYAKNAFKLS SEYYLREAKWSNTKYTPSFAEHLEVSVMSSGFPMLAPVVLMGVHDDAAVATAAAFEWA TAAGVPDVVIAASGEVARFLNDIASHRVGKNEKDVPSSVESYMAEHGVGEEAALAAVA AMAEHGWRTINRALMEMDPGLLPAARLIVNLTRTLEVIYLGGRDGYTFGGDIKGLVVS LFLDPVAVIRI</aaseq>

Gene Sequence

<dnaseqindica>1..118#2458..2767#3225..3605#3693..3911#4002..4137#4246..4815#atggccgcgagcaaggctgcagcagcgaaccagccgctggagatggacgctgtcgtcaatggcggcgccggctttgaccttagtagcgattcatacaagttaaatcttctaatcaatggtgggccaataatgaattttttttgcatatgtattaagacgcttggcctgatttcgaaattgtccagagttttttatgtagttttcattgcaaaatgatggatctccttccgtaactttccaattacgagtacgagaattgaaagacatgaaaattctcaattctctacggcgtctaggagatagatagaatattttcaggaacaagaaaaccagaagaatctttctctctattcactaccatttcgcgtcttcgacttctattagtttcttttcttctttaatgcaatagctatagtttgatatagaatccatttctcaaagtaatggaaacctttctcttataggaaatggttcgaaaatcgctattccaccttttaggtatcgtgaaaagtgatacctgtgaagatcgtgcatttcagtcacattcagatccgttttttgagtccatgatataaccaaattggatggatcttccacccgtttagctaagaaagaatagatgcagaggtggataatagatcgatataaagatcatgagctgccccataatgaaaccaccaggagtcgcgaatatctccttcttccctaatccaagattggagaaagaagatccaagagggacccatggagaatgtggtcagaaacctataatagagtccgaccgcaacgacctcatcgagaaacttagactactaagtagaaaagatttgaaaatcatggcatgggtctcctttttttctttctttagagttttctatatgcacaatttctcgatgtttcgatgagaatttcttgactttccatatatagaaagagatagactataaatgacatctcttatgtcaataagaccaaagggatggatattaaatgataggaagtgctagaaagtgaaatagaatgaaatagagccactctgggcttacctatgaaatgaggcatggaacggagccactacgaagaaattccgggagttacgaaagaagcttcggactcatattgttcatgggttgagagcgggagttgaactctaggaggtcgaatcccccttgttcctcagtagctcagtggtagagcggtcggctgttaactgactggtcgtaggttcgaatcctacttggggagatttgattcattctttaatgtaagaataaagaattgaattaaagggctttctttgacccttaggagtaggtaacccgttcgctatccttgtttctattgcattttatctcatcgtatcacattctgttctacgattccacttcgacaaaaggaaagagcatacccaagttcaatagctttacgtccgctatcccgatcatggttttcctaccctcagggggaaagtaaaggcccttcccctttggaaggctgtgggcgaggagggattcgaacccccgacaccgtggttcgtagccacgtgctctaatcctctgagctacaggcccaccccgtctccactggatctcttcccggggtaccctcaaaaggaacctccctctcctcagccatttcatttcgggttaagaagatgggaaaacccctttctctctataagaatagtgcgttccgaggtgtgaagtgggagagaggggatgtgatgattgaggttttgaataagaagacctttgcattttggatttggatctttttcgtatttcaaaatagtgaaaaagtcaaataagaggtgttaagctttttatcattctggcatcgagctattttgccgcaggacctcccctacagtatcgtcaccgcagtagagtttaaccaccaaattcgggatggattggtgtggttcctctacgcctaggacaccagaatatcgaaccatgaacgaggaaaggcatgagagaaatattggctagtaattgtgaagccccaattcttgactggaagggacaccaaaggcctctgccctccctctctatctatccaagagatggaagggcagagcttttttttggttttttcatcttttcatcaaagagttgaacaatgaagataaatggcaagtgcctgatcgatttgatcaggtcgtgtaggaacaaggttcaaatcgttcgttcgttaggatgcctcagctgcatacatcactgcacttccacttgacacctatttaaacggctcgtctcgccgctaccttatcctatttccatgcttctgtcgctccatccccgtatgggtggagaacccgtcacctacgcccctcccctctcgcaggcacgggcgtgatatcgatccagtggctcacatgatttctgtcaaatttcagacaaaatttgatcaattttcgcctgttttaaacgatcatatatatattaattgatgcaggttgtgaggagcggatgagggcgcgggcggagcggctcgccggggaggtgcgccgcaggatgttcgccgccggcggcggcaacggcgacggcgagggcggagttacgatgagcgtggccgaagcggcgacgctggtggacacgctcgaacgcctcggactagatgggcacttccggcacgagattggtgtgctgctggggcgtctccgccgcgaggaggcggattttgcaggcagcgacgacgacctgtatactgttgcccttcggtttcgtctgcttaggcagcatggggtctgggtatctgcaggtacgtaactgttagtcttggattaattaatactatgatgattcatagaggaaaatacaagaaaattggttttgcataaacgatttaagaacgaatggcaatacatatagttaacggatttgctagaaaacttctataagttttttgttcccaaaacttttaggattgtaaccatcggatcgccttgagatttgtgcatgaagaaaaaaattgctaaaagaatgtttcacacgtgtcacgcgtaagatttcagtactaactaaccaaaccatagttgaatgcaagttttatataagttatatcgtagttacaatatagtacaatataattacacttcaattatattatagttacatctgaaagttttatactcaaaaaacttgtgacaatttttagatatagatactacctatagttaattaattaatttggcattatgttgtgtttgcgtacgtatgcagatgtgttcgcgacaagttcagagatggtacatgtagtttcagctcaagcctacgtgatgacccgaggggcttgctgagcctgtacaacgcagctcacatggcagcacctgtagagatcgccctagacgacatcatcgccttcgcgaggtgccacctcgaggccctgtccatggaaggcgagctcaaatcgccattggctgagcaggtctcccgcgccccggacatcccactcccacggttcccaaggcggctcgagaccatgagctacctcgtcgagtatgagcaagaggacgaacacgacgacatgctgctggagctcgcgaggctagaattcgagctcacgaggtgtcttcaccttgaggagctcaaggctctctccttgtgagtgatcgtttcttatcgtctcattgctgctgccactgtcttcttcgtcttcgctataagtgtaagaggttgatgatcttgcaggtggtggagagagctttacgagagcgtgaagctgagctatgctcgagatcgcctagtggagtcctacttctggacatgcggcgtgttccatgaggaggaatactctcgtgcccggatcatgtttgccaaggtatttggattgctgtccctgatggatgatacctatgacgtccatgctaccttggaggagtgctataagctcaatgaagctatacagaggtctgaattaattaatctctcatgatgttgcattgttgattgatccttatgctggtgattcagctcacatgtatacatgtcgatgtgcagatgggacgagggcgcgatttctattctgccagaatatttgcgcatgttttacatcaagctgctgagcaactttgacgagttggaggctagcttagaaccacacgagaagttccgcgtgtcctacgccaaaaatgcggtaaatattcatagtaaaaatcacatttcagtctatgaaacatgctaatatgtagagtaaaatcagtagaatctcacgtgaaattctccctttcctgtccatgtacagtttaagctgtcgtctgaatactacctccgtgaggccaaatggtcgaacaccaagtacacgccgagcttcgccgagcacctggaggtgtccgtcatgtcgtcgggcttcccgatgctggcgccggtggtgctgatgggcgtgcacgacgacgccgccgtggcgaccgcggcggcgttcgagtgggccaccgccgccggcgtccccgacgtggtcatcgccgccagcggcgaggtggcgcgcttcctcaacgacatcgcgtcccaccgcgtggggaagaacgagaaggacgtgccgagctcggtggagagctacatggcggagcacggcgtcggcgaggaggccgccctcgcggcggtggcggcgatggcggagcacgggtggaggacgatcaaccgggcgttgatggagatggaccccgggctgctgccggcggcgcggctcatcgtgaacctgacgaggacgctggaggtgatctaccttggtggcagggacggttacaccttcggcggcgacatcaagggcctcgtcgtcagcctcttccttgatccggtcgccgttatacgtatttga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0361100, RefSeq:Os03g0361100