Os03g0369800

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0369800| Description = Similar to Novel plant SNARE 13 (AtNPSN13)| Version = NM_001056730.1 GI:115453188 GeneID:4332931| Length = 4127 bp| ...")
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Gene Name

Os03g0369800

Description

Similar to Novel plant SNARE 13 (AtNPSN13)

Version

NM_001056730.1 GI:115453188 GeneID:4332931

Length

4127 bp

Definition

Oryza sativa Japonica Group Os03g0369800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15065240..15069366

Sequence Coding Region

15065471..15065587,15065964..15066038,15066122..15066214,15066335..15066391,15066464..15066543
,15067117..15067220,15067436..15067473,15067554..15067647,15067953..15068045
,15069102..15069178

Expression

GEO Profiles:Os03g0369800

Genome Context

<gbrowseImage1> name=NC_008396:15065240..15069366 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15065240..15069366 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcgacgtgcccatgagcccggagctcgagcagatcgacggcgaggtccaggacatcttccgcgccctccaaaatggatttcaaaagatggacaagattaaagattcaagtaggcaagctaaacagctggaggatctcacagcaaaaatgaaggagtgcaagcgtttgatcaaagagtttgatcgtatattgaaagatgaggagtcaaacaaccctcctgaggtccacaagcagctaaatgacagaaagcaatatatgatcaaagagttgaattcctatgtcaccttgaggaagacatatcaaagtagcctaggtaataataataagagggttgagctctttgatatgggcgctggaagtagtgaacctgctgccgaggacaacatccaaatagcatcagctatgacaaaccaacaactgatggatgctggaagagaacaaatgactcagactgatcaagctattgaccgttcaaaaatggttgtggcacaaactattgaaactggaacacaaactgcttcagcgctatcacagcaaacagaacaaatgaagagaattggcaatgagctggatactgttcacttttcgttaaagaaggctagccagctggtgaaagagattggccgtcaggttgcaactgacaaatgcattatggcattgctttttctgattgtttgtggtgtgattgcaattattgttgttaagattgtcaacccacataacaagaacatccgcgacatcccaggacttgctccgcctgctcaaaatttccagattagtaacaggagactgctgtcggtagaaattatcagaggtctatga</cdnaseq>

Protein Sequence

<aaseq>MASDVPMSPELEQIDGEVQDIFRALQNGFQKMDKIKDSSRQAKQ LEDLTAKMKECKRLIKEFDRILKDEESNNPPEVHKQLNDRKQYMIKELNSYVTLRKTY QSSLGNNNKRVELFDMGAGSSEPAAEDNIQIASAMTNQQLMDAGREQMTQTDQAIDRS KMVVAQTIETGTQTASALSQQTEQMKRIGNELDTVHFSLKKASQLVKEIGRQVATDKC IMALLFLIVCGVIAIIVVKIVNPHNKNIRDIPGLAPPAQNFQISNRRLLSVEIIRGL</aaseq>

Gene Sequence

<dnaseqindica>3780..3896#3329..3403#3153..3245#2976..3032#2824..2903#2147..2250#1894..1931#1720..1813#1322..1414#189..265#ggagccaagccctaggctcctcctctcctcccaatccccaatccctgttcggcttctccttcctcccctccgcggccgatcgcgatggaaccctgagctacgtggttggtgcttcaccgctggagtagagttctactatagtagggtttgggggcggcggtctcggaggagggaggaagcctttggccatggcgagcgacgtgcccatgagcccggagctcgagcagatcgacggcgaggtccaggacatcttccgcgccctccagtgagccacatctctccctcccctgttactgttactgttactcttctcttctgttcagtacttactagtagtactattaatatgcgcacacacaactctgcgctgaggccaacccacgctggttcaatcgttgtttctatcttctttactccctcctgttttgagccaactggatgcctaatctgtcccaagcgatcgtcagattgtttgctccggtgcgatttcaacgattttaactaaatgaatttggataatgatagtatacttcgacttgttttcggaacatttagataccaaattgtctgataacatgcgcgccttgcaaattgaactttttggactgcttgagtatccgacaaacatatatttttgacagcctgatgtataattcagtattctttttttttcaaaaaaagaaaaaaaagggctctataaggctgtataaggaatgagtactcaacttgtaactgaatagttggtagttaggctgcagaagtggcctgttaggccacatgatttccgcaaggtgggtgaccacatagatactaccttactgcttttcagaatcttgagggcactccatcctttttaatatggcactttataggttgcgcggtcaaacattccaaaaatcaatatgcttaaaatcaacaaattcaaattcacatctgggaggccatggcagctaaagatttaaaatataagagtaccgtcggaacttgaaacaacaaactttagtgcattcagtgggacatgatattttcttgatgaaaccattcttattttgagtgtatttaattccaatgaaacagttacaagtttcccaagggacaagtttcaagcactaacgtattgaccttatgagcatgcctaacaattgcacagtacgagttggtccaaagtcaattgtactcttgataacattggaccatagcgacatatgtttgaatctatattggtcacatttgaaatatttctgtactacctgccttattaattgctaacttgatcttgcagggaattttaattttcctattattttttttctttttgcagaaatggatttcaaaagatggacaagattaaagattcaagtaggcaagctaaacagctggaggatctcacagcaaaaatgaaggagtgcaagcggtaggttaagctgagcgttcttcagtctgctatcccgaaattgttgttttctttttgatgcctatactgttgttattttcctattcataggctcctcctttcagctttcttttattcctaaatgaaagcatggaagtctttccataatgtatgaccctctagaccataatttgttgatatacggtgttaatattattatttttaattcacaattaaacagacaacaagatgtaatctgttggatttacgagagtttccgctttgttgaatatacactgattctgtttttaaaacgtcctttccagtttgatcaaagagtttgatcgtatattgaaagatgaggagtcaaacaaccctcctgaggtccacaagcagctaaatgacagaaagcaatatatggttggtacctccctttgatatgctatttgttgtagcccatctgtgcatactcatgtaaaagtttcttatgaactgtacagatcaaagagttgaattcctatgtcaccttgaggaagacgtaagtcagcaagttctcttgatgaataaatatgtttcacagaacctctagtttagtctctgttgtattatatataaccaattccattgggaggaaacccagtttcttaaactgaaaaaaaatgctcttgtttataacatccgtacctcctgcaatattcttctgtaatgtcttttgttacttctagtaatgctaacacaaactatctgttgcagatatcaaagtagcctaggtaataataataagagggttgagctctttgatatgggcgctggaagtagtgaacctgctgccgaggacaacatccaaatagcatcaggtgaaaataatcatgtgaatctttttcaaatgtggttaatgccatgctaataatcttcttaaatgtaataattgccttatgattgctgagcataagatgcagagcttgcaatcatgttgagagtatatgaaattacaaagtattgtgatggatcgatttcttaacttttgatactataatgacaagtagactatattatagattttcttttgaacaacaaagtagagaaaacaattagtttcgaacatggttgagctgtttggttaagtaacattacagcatccactatatggaaatgcaaatgaagcatggtatttatcttgtttgatttgaaggcaatagtgttatataattcataaataccttttcgcttcacgatgattaattttgcctggtaggttgcaagatacaagtttctcaaaaactgaagaggagctaaaagaatttatttcaagactaaaaatcttattactgggttttgctggctcattgatcttatcacgctgacaatgacactatggaaagctagatatctctgttagttcttatgtaatcacctgtctaaacttgcagctatgacaaaccaacaactgatggatgctggaagagaacaaatgactcagactgatcaagctattgaccgttcaaaaatggttgctttacgaactacactcactcttgtcaatgttctttcatgtcaaatttacaggacatctttcttgtaggttgtggcacaaactattgaaactggaacacaaactgcttcagcgctatcacagcaagtaagtttttctacattacatactatacaagattttcctgtgacatgcctgttttggcaatctggtatacttgtgtgtttagtatgcaatctagtacaacaaatctcttttgctttacagacagaacaaatgaagagaattggcaatgagctggatactgttcacttttcgttaaagaaggctagccagctggtgaaagagattggccgtcaggtacccccatccctctctcttccctctgcgtgcgcttgtgcttttgcatgtccagcagtacctgaaatttgaaatccttgcaggttgcaactgacaaatgcattatggcattgctttttctgattgtttgtggtgtgattgcaattattgttgttaaggtatgttcttcaggttttttctatgtacttccatctcctgaggattatgagtggattatccaatcaaacacacaactaaatttcattggtgatgaaaaattcttatagcatattgcttatttgtccttcactactttaggagtgaaacaatgctctgaaacatttttttaactataaaccgagttatgattagttgttaatgctacttgtccaactgcttacacaaatgacatatctggcacttttgttttggccaattgagttcaaacttctatttcgtttttgcaattcttaggcatcataccactaactgttgttactatgccacgattgaacttgaataacaattaatcacaatattttatttttttaacagattgtcaacccacataacaagaacatccgcgacatcccaggacttgctccgcctgctcaaaatttccagattagtaacaggagactgctgtcggtagaaattatcagaggtctatgatgactgtgcttgcaagttccatgcaggcggagttcagttcgtttcttcagagtagcttaattgcggtcataagatactacgacatgctgtaaaattcttagtgcctgtatattttattccctggtgtattagatatgaagtcagtagattcccgcgtctgatgcttgtatactccccggccttttggttgtgtgcataaatgcattatagagatgagatcttttaccagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0369800, RefSeq:Os03g0369800