Os03g0385400

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0385400| Description = Plant lipid transfer protein/Par allergen family protein| Version = NM_001056787.1 GI:115453302 GeneID:4332993| Leng...")
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Gene Name

Os03g0385400

Description

Plant lipid transfer protein/Par allergen family protein

Version

NM_001056787.1 GI:115453302 GeneID:4332993

Length

2153 bp

Definition

Oryza sativa Japonica Group Os03g0385400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15858580..15860732

Sequence Coding Region

15858652..15859015,15860305..15860477

Expression

GEO Profiles:Os03g0385400

Genome Context

<gbrowseImage1> name=NC_008396:15858580..15860732 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15858580..15860732 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgttgccgcaagagccgccgccgtggcgtgcctcctggtcgtaggcctcgcggccgtggcgggggtcgacggcgccacggcgagctccccggccccggcgccggccgtggactgcacggcggaggcgctgaagttggcggactgcctggactacgtgaccccggggaagacggcgccgagccggccgtcgaagctgtgctgcggggaggtgaagggcgcgctcaaggacagcgccgccgtgggctgcctgtgcgccgccttcacctccaagacgctgcccctcccgatcaacatcacccgcgccttgcacctccccgccgcctgcggcgccgacgcctccgccttcagcaagtgcctcgcaccggcgccgtcgccgtccgtggccccggggacatcgtccggcagcggcggtgcggcagcggcaccggcgaagggcgccgccgcagcgaggtctccgatggcatcgaccaccgccgtgctcgtcgtcgccgccgccgtggcagctcctctgctcgccttctttcacttctga</cdnaseq>

Protein Sequence

<aaseq>MAVAARAAAVACLLVVGLAAVAGVDGATASSPAPAPAVDCTAEA LKLADCLDYVTPGKTAPSRPSKLCCGEVKGALKDSAAVGCLCAAFTSKTLPLPINITR ALHLPAACGADASAFSKCLAPAPSPSVAPGTSSGSGGAAAAPAKGAAAARSPMASTTA VLVVAAAVAAPLLAFFHF</aaseq>

Gene Sequence

<dnaseqindica>73..436#1726..1898#tccttgcacctctgctccgacttccgagcaaagccaagttgctcaccgactcacccgtagagctagctagccatggctgttgccgcaagagccgccgccgtggcgtgcctcctggtcgtaggcctcgcggccgtggcgggggtcgacggcgccacggcgagctccccggccccggcgccggccgtggactgcacggcggaggcgctgaagttggcggactgcctggactacgtgaccccggggaagacggcgccgagccggccgtcgaagctgtgctgcggggaggtgaagggcgcgctcaaggacagcgccgccgtgggctgcctgtgcgccgccttcacctccaagacgctgcccctcccgatcaacatcacccgcgccttgcacctccccgccgcctgcggcgccgacgcctccgccttcagcaagtgcctcggtcagtcacccttctgcttcttcttcttgtttactcttctttgttgggttagcaagtttacaaatctttacgtccaaaattataccttgaatttcaaatcttactttactttcatcaccaaatctttctaggatttagtttgcaggttcgcagtttgcgttaggtatgtttccgtcacttacgaaaagaaacccgaacgtctattcagcttttttttaggaccattcgctcgatcgaagagtatatgcacaaacagaatttcgttaaattgatttgataaattcaactgaacaaacttaattggttgatactgatagtactgctgctgacgaagatgagcttatctttctacaataaagcgtgagcatttataacaaaatagcgaaacaagcattgttctttcacatgggctttggtccatttggttcacaataatggcataaatggggggccgccattctgttccttatccacaaactgatgagctagcagtattattagttttatattctctaccttttttcattatcttgttgatttgcgatcgatcgattgcatgtgaatcctaaatagctagctagcagaaagataaagacaagagcatgtagtcgaaagaaacttttttatcatcctaatcacatcagtatcttgcaggcaagtacatacagaaacttttaccatccaaatcacatatctttgaatgcattcctatcttactgccctctcctgaaaaggacatgatattttgcattattgcgcaaatcgagctagattagaacaagtaatagtacaaattgattcctagagatctggatcttggccaacttgtacatactgattgatagtgcagctagctatgcagtcacggggttagttaagcttggcttaagtcacgggagcgtccaagctgctgcaaccttactactagtcagctagctaggcagccaaaacgtaatgcgaattctcgactagatctgagcccagacagcggcatgttgattcgtggcatcgctgagaatgacagccactactacaggacacgcaaatgctctccatctggcactctgtgtgatcaggctagctagctttgccatccagtgtctagacatttctgttcagtggacgtactacactactagtagtagcagtaacagattttggattgtaccaaactgacaacaactgatcggtacagtatgtggtttctgcattttccctgccctattttgctggcaatgagcatgcgtagacagtgatgtttctctcttgattaatttgtgaacttgcagcaccggcgccgtcgccgtccgtggccccggggacatcgtccggcagcggcggtgcggcagcggcaccggcgaagggcgccgccgcagcgaggtctccgatggcatcgaccaccgccgtgctcgtcgtcgccgccgccgtggcagctcctctgctcgccttctttcacttctgatcgaggagtcctttcgtagcctcattacattctacagtttgtcgttgtgatcgtgattagactcggtgactttttgttgtgacaatttgagtttactgcatgcatgcaccctgccgtgattaatttagctctccagagtgagcattcatatttaaaatagtttccgtgagttatttttaatttgtatcgttatatgtgcatcatattattaagagcggttaaatttgacaaattggctacaaagtattttatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0385400, RefSeq:Os03g0385400