Os03g0387000

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0387000| Description = Conserved hypothetical protein| Version = NM_001056793.1 GI:115453314 GeneID:4332999| Length = 2559 bp| Definition ...")
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Gene Name

Os03g0387000

Description

Conserved hypothetical protein

Version

NM_001056793.1 GI:115453314 GeneID:4332999

Length

2559 bp

Definition

Oryza sativa Japonica Group Os03g0387000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15967975..15970533

Sequence Coding Region

15967976..15969031,15969124..15969474,15969581..15969976

Expression

GEO Profiles:Os03g0387000

Genome Context

<gbrowseImage1> name=NC_008396:15967975..15970533 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15967975..15970533 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggttcggcgattagagctgctaggtgaagttgcaaaattggcaagttcccttcatcttcctgaagatgtgagctacacatgtgaaacggctgcatacttttggttattacatgtttatgctcgctgggaacaatttttagctgcctgtgcgcaaaaccaagacaagccctcatttgttaaagaccgcttccctttctcagagttcttctcagatactccacaacctaccttcactggtgagtcctttgagaaagatatgcatgcagccaaaggttgtttcaaacatcttttgacaatatttcaagagctggaagaatgtagggcttttgagctacttaagtcaacagcagagagggcaaattatctaatgaccaaacaagccaagattgttgccatgacttgtactcatgcggcattgaagaggagagactttcttcagttagggttcaaatacgataatttgctgatggaagaaagtgcacagatattagagatagagactttcataccgatgctgctgcaacggcaggaagatggctatgctcgtctgaaacgttgcattttaattggtgatcaccatcagttaccccctgtcgtgaagaacatggcttttcagaagtacagccacatggaccaaagtctctttacaagatttgttcgtcttggtgtcccttacattgagctcaatgctcaggggcgtgccagacctagcatcgccgaactatataactggagatacagagaacttggagatctaccttacgtccgtgaggaggctatcttccacaaagctaattctggcttctcttatgactatcagttggttgatgttcctgatttccgtggcagaggtgagtctgccccttctccttggttctaccagaatgaaggggaggctgagtttatagttagtgtctacatctacatgcgcctgattggataccctgccaataagatttcgatattgaccacttacaatggtcagaagcttcttattcgcgatgttattaacagaagatgcaagccatggaatatcgaaccacctagcaaggttaccacagtggacaagttccagggtcaacaaaatgatttcattttattatctcttgtccgcacccgttttgtggggcatcttcgtgatgtcagaagacttattgtggcaatgtcccgtgctcgtctgggcctgtatgtgttctgccgtcgttcactttttgaacagtgctacgaattgcagccaacattccagcttctcctccagaggcctgataagcttggcttgaatcttgaagagtgcacaccatttacagagcgacctttagaggaaactggaaatattcattatgttgctggtattgaagatattggtcatctagtgaatttcagattagaacatcttcgtcagatgcaatacatgcaatattatgcacctcatgcaaatgtaccaccttcagcagtaccagaaaacaatgctgatgcaactgaaaatggcaatgctggcaatggtatgcataaggcaaacgatgtcatggctgaagaaaatggtgatgcagtgatgagaaataagatggaggaagacactattgatacaatgcaggaagaaaacaagatggatggtaaaaatcctgaggcaaacgacatggctatggaggagaagaccgtcgacggagatgatgatccaaagaataagatggaggaaggaaatactgaggcaaagaataagatggaggaaggaaatactgaggcaaaggacaagatggaggaagaaaatgatgtggcaaagaacaatatggaagagtga</cdnaseq>

Protein Sequence

<aaseq>MLVRRLELLGEVAKLASSLHLPEDVSYTCETAAYFWLLHVYARW EQFLAACAQNQDKPSFVKDRFPFSEFFSDTPQPTFTGESFEKDMHAAKGCFKHLLTIF QELEECRAFELLKSTAERANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEE SAQILEIETFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFT RFVRLGVPYIELNAQGRARPSIAELYNWRYRELGDLPYVREEAIFHKANSGFSYDYQL VDVPDFRGRGESAPSPWFYQNEGEAEFIVSVYIYMRLIGYPANKISILTTYNGQKLLI RDVINRRCKPWNIEPPSKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLIVAMSR ARLGLYVFCRRSLFEQCYELQPTFQLLLQRPDKLGLNLEECTPFTERPLEETGNIHYV AGIEDIGHLVNFRLEHLRQMQYMQYYAPHANVPPSAVPENNADATENGNAGNGMHKAN DVMAEENGDAVMRNKMEEDTIDTMQEENKMDGKNPEANDMAMEEKTVDGDDDPKNKME EGNTEAKNKMEEGNTEAKDKMEEENDVAKNNMEE</aaseq>

Gene Sequence

<dnaseqindica>2..1057#1150..1500#1607..2002#tatgctggttcggcgattagagctgctaggtgaagttgcaaaattggcaagttcccttcatcttcctgaagatgtgagctacacatgtgaaacggctgcatacttttggttattacatgtttatgctcgctgggaacaatttttagctgcctgtgcgcaaaaccaagacaagccctcatttgttaaagaccgcttccctttctcagagttcttctcagatactccacaacctaccttcactggtgagtcctttgagaaagatatgcatgcagccaaaggttgtttcaaacatcttttgacaatatttcaagagctggaagaatgtagggcttttgagctacttaagtcaacagcagagagggcaaattatctaatgaccaaacaagccaagattgttgccatgacttgtactcatgcggcattgaagaggagagactttcttcagttagggttcaaatacgataatttgctgatggaagaaagtgcacagatattagagatagagactttcataccgatgctgctgcaacggcaggaagatggctatgctcgtctgaaacgttgcattttaattggtgatcaccatcagttaccccctgtcgtgaagaacatggcttttcagaagtacagccacatggaccaaagtctctttacaagatttgttcgtcttggtgtcccttacattgagctcaatgctcaggggcgtgccagacctagcatcgccgaactatataactggagatacagagaacttggagatctaccttacgtccgtgaggaggctatcttccacaaagctaattctggcttctcttatgactatcagttggttgatgttcctgatttccgtggcagaggtgagtctgccccttctccttggttctaccagaatgaaggggaggctgagtttatagttagtgtctacatctacatgcgcctgattggataccctgccaataagatttcgatattgaccacttacaatggtcagaagcttcttattcgcgatgttattaacagaagatgcaagccatggaatatcgaaccacctagcaaggtatttattgcttgagctatgttttttaagctagtattttatcattctttctgctttgtgctgacatgtacccttttctatgcatcatgtaggttaccacagtggacaagttccagggtcaacaaaatgatttcattttattatctcttgtccgcacccgttttgtggggcatcttcgtgatgtcagaagacttattgtggcaatgtcccgtgctcgtctgggcctgtatgtgttctgccgtcgttcactttttgaacagtgctacgaattgcagccaacattccagcttctcctccagaggcctgataagcttggcttgaatcttgaagagtgcacaccatttacagagcgacctttagaggaaactggaaatattcattatgttgctggtattgaagatattggtcatctagtgaatttcagattagaacatcttcgtcaggtacatacagcactgttccagtaccaagtctcttgcaaaacttaattatgttaattatgtttgatgtctttgaatctgacaaccccaaccacttcatttgcaacagatgcaatacatgcaatattatgcacctcatgcaaatgtaccaccttcagcagtaccagaaaacaatgctgatgcaactgaaaatggcaatgctggcaatggtatgcataaggcaaacgatgtcatggctgaagaaaatggtgatgcagtgatgagaaataagatggaggaagacactattgatacaatgcaggaagaaaacaagatggatggtaaaaatcctgaggcaaacgacatggctatggaggagaagaccgtcgacggagatgatgatccaaagaataagatggaggaaggaaatactgaggcaaagaataagatggaggaaggaaatactgaggcaaaggacaagatggaggaagaaaatgatgtggcaaagaacaatatggaagagtgagctaacatggctgttatctgattggactagaggctaacaaaggcttcatgttcgctagcttgatccaccacaattcttgatctggaataccaaatattgaagcacgcaacatcacatggaggggttcataacatggctcctgggatggtgtgcgtggaatggagcatgatatgcgaaggttaaagatatttttggagcttcttggccaaactatgctccttttatttccggccaattgtgtggtataccgtatacacatgtactgttatatggtttcacacatttggccgaaacacacgacggctattcagggggcattagcatgtacaaaagagatgagtttcttgttgtggtttcttcccttaactgtttaacatagctatgcgagtgcaagagggcagatgaaacattgatgttgtgatatttttgtatactcgattgttttgtaatatggttacgaggagcgttagagtttttttttttttaacactgcagcatgaggaggtagactactgtaactgctgtctgataacactgcagaaactggtggtagctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0387000, RefSeq:Os03g0387000