Os03g0391300

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0391300| Description = Similar to Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing...")
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Gene Name

Os03g0391300

Description

Similar to Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1)

Version

NM_001056815.1 GI:115453358 GeneID:4333023

Length

2303 bp

Definition

Oryza sativa Japonica Group Os03g0391300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16226427..16228729

Sequence Coding Region

16226675..16228678

Expression

GEO Profiles:Os03g0391300

Genome Context

<gbrowseImage1> name=NC_008396:16226427..16228729 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16226427..16228729 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggagtaccccgtattacctatcatcgtcttggcgtggacgtagatcatgaagcggcgggcgttctgcgccctcatgtagtcggtgtcggggtcggggcgctccgttggctcgtagctgtacccgccggggacggggaggcgctcgcggttgccgaggcagaagaagttgaggtagtcggtggggtcggcgcggatccccttggcctggatggcggcgtccacgtccctgtacatcatctccatggtgcgccgctgccagtccaggatggcctgcacggagtcgctctccggcacgccctccggccacatcggcaccaccacgtacacggcgaaccgctcgccggcggcgatcttgctcgcgatcttgagggagagctccctcgggaccaggtgcagcgcgttgatcccctccacgctcgccacgccgcccttgccgccgcgccacgcgtacgagctccccaggaagtactggttctcgacgtagatgaagtcgcgggcgcgccggatcgcgtggatgtacgcgtcctggatgctgcgctcgatcacctggtccttgccggacaccagccccgccgccgcggcctcgtcggggctctccgggaaccccgccgccgcgccgccgtcgatggagcggaacacctgcacgttccagtgctccgggtcggcctggtcggcgtcgcgcgcggccatgctccggtcgagggtgaccagaaggctgtccttgcccctgccggcctgcttgcgccaccgctgctcgaagttgtcgagcacgtcccaggccgcggggccctcgacgcggcagtggatgtcgtgccatggctccctcggcccgcccttggcgatggacgcgccggggaagttgggctggtggaagtcgccgcggtgggtggtgtcgagcgtccggaacagcgggtgctcctgcgtgtcgtacctcccgtcgcacaggtcgatgccgccgaggaagctcacgaggcccggcgccgtcttcccgccgccgccgtcgacgatcaccgtcttctggtggtgcgtgaacatggtggccgtctcgacgtcctgcacgtagctccggccctggtcggggttccgggggcagaggacgcagtggaccttggtgccctcgaagtacctcgccgtgtcctggtcgtgcgtcgccatcagcccgtcgcggcggatcgggccgagacccaccgacgtccggtcgttccacaccagcagcagcaccatcacgccctgctcggccttcctcttgagcagctcgccgagcgtctccgacgacgacgacggccgccgcaccagcacgacgtcggtgttgacggaccacccggcgacgtacaccatcctccgggcgctgctgatcgcgtcgaacacgtcctcccagcaccgccgcggctcgtaccacctgcgcccggcgagctggatgcgcggcgcgaagccgtcggcgatgtgcgcgtcctggtacagcctgacgcggcacccgcggcgctgcgggaagaaggtgcgcggcacgccctggtacgcgccgctcccgacgccggcgccccagcgcgccgccgggtcggcggcgacgccggtgaaccggagctggacgcgtatcttgtccccgccgtcgatcgggcggcggccctcgccgcagatggggagccacaggtcggacaccggcgcaccggcggcgaggccctcgtcgacggggaggtaggcgcggccgatgagcgtggcgccgacggggttctcggccttgacggtgaagatgacgtcgccggcgtagtgcgcgcagtagatgtggaacgactccttccaccgcggcgtgcccgtcggctccaccgtgcgcgtccgcgcgacgcgggccttgtcgatgtccaccgtcgcatacagcttgccggacagcgggccgaggccgacggcgttctccacctgctgcgtctgcaccgccgccgccgccgcgttaatataatcattaagatacaatacaacactggccttaatttgatggccttatag</cdnaseq>

Protein Sequence

<aaseq>MEGVPRITYHRLGVDVDHEAAGVLRPHVVGVGVGALRWLVAVPA GDGEALAVAEAEEVEVVGGVGADPLGLDGGVHVPVHHLHGAPLPVQDGLHGVALRHAL RPHRHHHVHGEPLAGGDLARDLEGELPRDQVQRVDPLHARHAALAAAPRVRAPQEVLV LDVDEVAGAPDRVDVRVLDAALDHLVLAGHQPRRRGLVGALREPRRRAAVDGAEHLHV PVLRVGLVGVARGHAPVEGDQKAVLAPAGLLAPPLLEVVEHVPGRGALDAAVDVVPWL PRPALGDGRAGEVGLVEVAAVGGVERPEQRVLLRVVPPVAQVDAAEEAHEARRRLPAA AVDDHRLLVVREHGGRLDVLHVAPALVGVPGAEDAVDLGALEVPRRVLVVRRHQPVAA DRAETHRRPVVPHQQQHHHALLGLPLEQLAERLRRRRRPPHQHDVGVDGPPGDVHHPP GAADRVEHVLPAPPRLVPPAPGELDARREAVGDVRVLVQPDAAPAALREEGARHALVR AAPDAGAPARRRVGGDAGEPELDAYLVPAVDRAAALAADGEPQVGHRRTGGEALVDGE VGAADERGADGVLGLDGEDDVAGVVRAVDVERLLPPRRARRLHRARPRDAGLVDVHRR IQLAGQRAEADGVLHLLRLHRRRRRVNIIIKIQYNTGLNLMAL</aaseq>

Gene Sequence

<dnaseqindica>52..2055#aatgttaatgaatcggtctatctagattcattgtgaaacgaaggaaggagaatggagggagtaccccgtattacctatcatcgtcttggcgtggacgtagatcatgaagcggcgggcgttctgcgccctcatgtagtcggtgtcggggtcggggcgctccgttggctcgtagctgtacccgccggggacggggaggcgctcgcggttgccgaggcagaagaagttgaggtagtcggtggggtcggcgcggatccccttggcctggatggcggcgtccacgtccctgtacatcatctccatggtgcgccgctgccagtccaggatggcctgcacggagtcgctctccggcacgccctccggccacatcggcaccaccacgtacacggcgaaccgctcgccggcggcgatcttgctcgcgatcttgagggagagctccctcgggaccaggtgcagcgcgttgatcccctccacgctcgccacgccgcccttgccgccgcgccacgcgtacgagctccccaggaagtactggttctcgacgtagatgaagtcgcgggcgcgccggatcgcgtggatgtacgcgtcctggatgctgcgctcgatcacctggtccttgccggacaccagccccgccgccgcggcctcgtcggggctctccgggaaccccgccgccgcgccgccgtcgatggagcggaacacctgcacgttccagtgctccgggtcggcctggtcggcgtcgcgcgcggccatgctccggtcgagggtgaccagaaggctgtccttgcccctgccggcctgcttgcgccaccgctgctcgaagttgtcgagcacgtcccaggccgcggggccctcgacgcggcagtggatgtcgtgccatggctccctcggcccgcccttggcgatggacgcgccggggaagttgggctggtggaagtcgccgcggtgggtggtgtcgagcgtccggaacagcgggtgctcctgcgtgtcgtacctcccgtcgcacaggtcgatgccgccgaggaagctcacgaggcccggcgccgtcttcccgccgccgccgtcgacgatcaccgtcttctggtggtgcgtgaacatggtggccgtctcgacgtcctgcacgtagctccggccctggtcggggttccgggggcagaggacgcagtggaccttggtgccctcgaagtacctcgccgtgtcctggtcgtgcgtcgccatcagcccgtcgcggcggatcgggccgagacccaccgacgtccggtcgttccacaccagcagcagcaccatcacgccctgctcggccttcctcttgagcagctcgccgagcgtctccgacgacgacgacggccgccgcaccagcacgacgtcggtgttgacggaccacccggcgacgtacaccatcctccgggcgctgctgatcgcgtcgaacacgtcctcccagcaccgccgcggctcgtaccacctgcgcccggcgagctggatgcgcggcgcgaagccgtcggcgatgtgcgcgtcctggtacagcctgacgcggcacccgcggcgctgcgggaagaaggtgcgcggcacgccctggtacgcgccgctcccgacgccggcgccccagcgcgccgccgggtcggcggcgacgccggtgaaccggagctggacgcgtatcttgtccccgccgtcgatcgggcggcggccctcgccgcagatggggagccacaggtcggacaccggcgcaccggcggcgaggccctcgtcgacggggaggtaggcgcggccgatgagcgtggcgccgacggggttctcggccttgacggtgaagatgacgtcgccggcgtagtgcgcgcagtagatgtggaacgactccttccaccgcggcgtgcccgtcggctccaccgtgcgcgtccgcgcgacgcgggccttgtcgatgtccaccgtcgcatacagcttgccggacagcgggccgaggccgacggcgttctccacctgctgcgtctgcaccgccgccgccgccgcgttaatataatcattaagatacaatacaacactggccttaatttgatggccttatagtattagggttagtttgtgatcaagcttaaacctggcagctgttgcagaagggcagcttcttcttgatccatgagaagaccttcttcttcatcagagtctggttgaagtgtttaaattttcagtttggttaattagattgcattttcaaactgtaatgactaatgagaatcatatcgcagctcacggtggtttatgttcgctcgggtaaaaaatatttgacattcaggatataattcagtcatgctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0391300, RefSeq:Os03g0391300