Os03g0397500

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0397500| Description = Pyruvate kinase family protein| Version = NM_001056837.1 GI:115453402 GeneID:4333045| Length = 3288 bp| Definition ...")
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Gene Name

Os03g0397500

Description

Pyruvate kinase family protein

Version

NM_001056837.1 GI:115453402 GeneID:4333045

Length

3288 bp

Definition

Oryza sativa Japonica Group Os03g0397500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16616863..16620150

Sequence Coding Region

16616940..16618654,16619765..16619771

Expression

GEO Profiles:Os03g0397500

Genome Context

<gbrowseImage1> name=NC_008396:16616863..16620150 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16616863..16620150 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatctcctccagtcgtcctacacgccggacgacgaggacgacgacgagcagcagcccctctcctcgccggacgcctcgccgctccgcctccccgccaagtcggccgcccccgccgtcgacgacacggcgctcgcgctctccgccgccgccgcgtccacctcccgcccgctcgacccctccctccacctcgtcccctttaaccccaccgccgaccagctctgggcgcccgtcctcgggccccagcacccccacgcccccatctcctccgcctccggcaaccgcaaccacaagctcggccacgtcgaggacgccgccgtcctccccttcctcttcgacgagcagtacaacaccttccaccgcttcggctacgccgccgacccctccggcctccacatcgtcggcgacgcccagccctcggccgagcccgacaccgtctacaacctcgccccctccgagcacaagcgccgccgcctgcagtccaaggacgaggagggcgccaaccaggagcccctaccgccggaggccaagaacccggcgtccgacgagtggatcctccgcaacaagcagagcccctgggccggcaagaaggaggcaccacccgcggagctcactgaagagcagcgtcagtatgcggaggcgcacgctgccaagaaggccgagaaggaggcgcgcggcgaagggaagggcgagaagtctgatatggttgccaagagtactttccatgggaaggaggagagggattaccaaggacggtcatggatcacaccgcccaaggatgccaaggcgagcaacgagcgctgctatattcccaagaggtgtgtgcacgagtgggttgggcacaccaagggggtctcggcgattaggtttttccccaagtatggacaccttttgctgtctgcgagtatggattgtaagattaagatctgggatgtgctcgagtcgaggacatgtatgcggacgtacatggggcactctaaggcggtcagagatatatcgttttctaatgatgggactaagttcttgagtgctgggtatgacaggaatatacagtattgggatactgagaccgggcaggtgatctcgaccttctctactggcaaggtcccttatgtagtgaagctcaacccggatgaggataagcagcatgttctcctcgctgggatgagtgacaagaagattgtgcagtgggatatgaagtcagggcagataacccaagagtacgaccagcacttgggagcagtcaataccatcacttttgtagataataataggaggtttgtgacatcaagcgatgacaagtcgcttcgtgtgtgggagttcggcatcccagtggtgattaagtatatcagtgaaccacacatgcattcaatgccatcaatatcactgcacccgaattccaactggctggcagcacagagcttggacaatcagatattgatatacagtaccaaggagaggtttcaacttaacaagaagaagcggtttgcgggtcacattgtggcaggttacgcttgtcaagtgaacttctcaccagatgggaggttcgtgatgtcaggagatggtgaaggtagttgctggttctgggactggaaaagctgcaggagatttaagacgttgaagtgccacaatggagtttgcattggatgtgagtggcatcccttggagactagcaaggttgcaacatgtggatgggatggcgtaattaagtactgggattga</cdnaseq>

Protein Sequence

<aaseq>MDLLQSSYTPDDEDDDEQQPLSSPDASPLRLPAKSAAPAVDDTA LALSAAAASTSRPLDPSLHLVPFNPTADQLWAPVLGPQHPHAPISSASGNRNHKLGHV EDAAVLPFLFDEQYNTFHRFGYAADPSGLHIVGDAQPSAEPDTVYNLAPSEHKRRRLQ SKDEEGANQEPLPPEAKNPASDEWILRNKQSPWAGKKEAPPAELTEEQRQYAEAHAAK KAEKEARGEGKGEKSDMVAKSTFHGKEERDYQGRSWITPPKDAKASNERCYIPKRCVH EWVGHTKGVSAIRFFPKYGHLLLSASMDCKIKIWDVLESRTCMRTYMGHSKAVRDISF SNDGTKFLSAGYDRNIQYWDTETGQVISTFSTGKVPYVVKLNPDEDKQHVLLAGMSDK KIVQWDMKSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI SEPHMHSMPSISLHPNSNWLAAQSLDNQILIYSTKERFQLNKKKRFAGHIVAGYACQV NFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLKCHNGVCIGCEWHPLETSKVATCGWD GVIKYWD</aaseq>

Gene Sequence

<dnaseqindica>78..1792#2903..2909#gggcaaatcaaatcaaaatcgaaaccaaacctccccaaatttccccagaaaccctaaccctaaccccacccggcgccatggatctcctccagtcgtcctacacgccggacgacgaggacgacgacgagcagcagcccctctcctcgccggacgcctcgccgctccgcctccccgccaagtcggccgcccccgccgtcgacgacacggcgctcgcgctctccgccgccgccgcgtccacctcccgcccgctcgacccctccctccacctcgtcccctttaaccccaccgccgaccagctctgggcgcccgtcctcgggccccagcacccccacgcccccatctcctccgcctccggcaaccgcaaccacaagctcggccacgtcgaggacgccgccgtcctccccttcctcttcgacgagcagtacaacaccttccaccgcttcggctacgccgccgacccctccggcctccacatcgtcggcgacgcccagccctcggccgagcccgacaccgtctacaacctcgccccctccgagcacaagcgccgccgcctgcagtccaaggacgaggagggcgccaaccaggagcccctaccgccggaggccaagaacccggcgtccgacgagtggatcctccgcaacaagcagagcccctgggccggcaagaaggaggcaccacccgcggagctcactgaagagcagcgtcagtatgcggaggcgcacgctgccaagaaggccgagaaggaggcgcgcggcgaagggaagggcgagaagtctgatatggttgccaagagtactttccatgggaaggaggagagggattaccaaggacggtcatggatcacaccgcccaaggatgccaaggcgagcaacgagcgctgctatattcccaagaggtgtgtgcacgagtgggttgggcacaccaagggggtctcggcgattaggtttttccccaagtatggacaccttttgctgtctgcgagtatggattgtaagattaagatctgggatgtgctcgagtcgaggacatgtatgcggacgtacatggggcactctaaggcggtcagagatatatcgttttctaatgatgggactaagttcttgagtgctgggtatgacaggaatatacagtattgggatactgagaccgggcaggtgatctcgaccttctctactggcaaggtcccttatgtagtgaagctcaacccggatgaggataagcagcatgttctcctcgctgggatgagtgacaagaagattgtgcagtgggatatgaagtcagggcagataacccaagagtacgaccagcacttgggagcagtcaataccatcacttttgtagataataataggaggtttgtgacatcaagcgatgacaagtcgcttcgtgtgtgggagttcggcatcccagtggtgattaagtatatcagtgaaccacacatgcattcaatgccatcaatatcactgcacccgaattccaactggctggcagcacagagcttggacaatcagatattgatatacagtaccaaggagaggtttcaacttaacaagaagaagcggtttgcgggtcacattgtggcaggttacgcttgtcaagtgaacttctcaccagatgggaggttcgtgatgtcaggagatggtgaaggtagttgctggttctgggactggaaaagctgcaggagatttaagacgttgaagtgccacaatggagtttgcattggatgtgagtggcatcccttggagactagcaaggttgcaacatgtggatgggatggcgtaattaagtactggtaagttggctggacaaattataaactaataacatgctatcactttgtttggattacttgctgcagactttcctgttgtgttgaatttgcattagtaatcgttcttctagcaacataggaactatttaaaatctgtatcgaatcacaagcgtttagcgaaataggattactaaaacaattatggtgtgcatgcaaagttatcccaaattagcatgagctaggatgcactacattttatttgaggttaagcttttaactgcttagttccttttttttttcattttgtgttgaattggtaatgacacgctacataattcaccgagtaagatgtgtgcactacagaagtaggctacacatcattacactatgagcaaacatcaccagatagtagcactacatcagcaacaccaatgtgctttcctttaactaaaggatgacagttttgtttagcagcgaaagtcattggcaataacgtgtttgtggaatttgctctcagaatttgtgtgggtatggtttattgtgttacttgaattctaaatcattgtttgtttttgttattcctattgtgaatcatgtttaattgatagctgagctagctcccctctgttttataacttaatttctaggaggtgaagctatctacattttcctgttgttacgacttgttctaccttcaagatatgataaacacgaactggctgcaattattgttattgcagcaactgctttataattttattgtggctattgataatttgaaaatatgctctgcctatatactgaatcgtatccttcatagtctaccaaaaatgtaatacaaaaattgagccttttctggttagttgctcctatatagttggttctttacagttatatttcagattttatcaattccaattgagcctttatgaaggtttcttcaattttctctatgctgattgattcttgcagcaacctatatataaaatattttcactaagattgcaacagtaatcgcattcctacctttatagttgtcttgatctgcttttcgtattgttgctattagtgagtttttctgtttttttgattgttgacttgttctggtactaaattttctacaacttgcagggattgaagttttggaaatgtaatgagagaggtttctcgagaatgtcctggttttgtggacaagttcatggcaatgcaatttacaaggtttgaacttcaggagatgttgaaagcacgcatgtctatccagaaaacttcaatgtcatcaggtgaaaactataccatgtttttaagctaccatgtaagctcgttctgctatcgaaagattgtaatgtactatgctatgtatacatactggaccaatcaattttgaactgtacgttactgcttacctgtttttggtttcagttcgtttattaatgccaacatttgtagcagctcagaacaaggcttgaataccaggttttattaggtagtttatcaatctttaatctgttcttgttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0397500, RefSeq:Os03g0397500