Os03g0398400

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0398400| Description = Hypothetical protein| Version = NM_001186535.1 GI:297722200 GeneID:9270542| Length = 3142 bp| Definition = Oryza sa...")
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Gene Name

Os03g0398400

Description

Hypothetical protein

Version

NM_001186535.1 GI:297722200 GeneID:9270542

Length

3142 bp

Definition

Oryza sativa Japonica Group Os03g0398400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16681439..16684580

Sequence Coding Region

16681439..16681524,16681633..16682123,16682211..16682329,16683389..16683717,16683832..16684176
,16684376..16684580

Expression

GEO Profiles:Os03g0398400

Genome Context

<gbrowseImage1> name=NC_008396:16681439..16684580 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16681439..16684580 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtgcgcaggggcctacgcctgcatcccccaccgcgttggcaatgtatttaggcaaatcccttgtacgggttgcttccaaaccgcattggttttcagtcgatgttagggtgcaaccctatgcgacagtagatgctgatggtaggaaaatcatcagtaaaggaggcactgggcattgggtaatcgattcagagagtttttcgtttgatttcctaatggaaagtttgagggttgagtttaagtggggctcgaaccaatctcccttagtgtggtattttaacaaaaatttgggtgaggatgttaggctcataggggacactgatttgccagatattttcgagatgtatgcaaccgaggccagtttccacctacttgtagcagttcttgaggaaagcatggatgttgcttctgtgtgttgtgtgcatgagcccattgctatcatcccacctgagaacccttcccacaatgatggttctggacaagctgctactaatgttggaggttctgcacagcctacaacagtggaagcagatgttagagagcctgacatgtttgataatgaggaagaatatgttggggttggtggccaatcctctcagactgctgccacaggggttgaagctcctgaggtagaagtcactgatgaagaccctcaggttgttcgagtgttgcatgatccagagaatccaaatatacaaatatatgcagtgaaaccagatgcaatagagtttcttgagcaacatcattcaagaatttggtacagatgtggctttggagaaagcagcaaatgtgactatctgacaaacaatgtttctgagagctttaatgctcagatcagaaatctgaaaggactgcttcctcatgaacttgttgacagcatacgagagttaataatggagaagatggccactagaagagatgttggcaagaaaatggatgatggaatcattccaggtgttatgaagcagcttaatgatgccacatctcttcttaaagtggtgaagattgccagaagtgatgatgggcatgcattggcctggatatgcagcagtggaggaaggatacaagattttgtgagcccatattatagtgtgcaaatgttcaggatagcttatgcaggcagagtaccacctatgactgacaggacacagtggccagtagttgatttgggcttcaaggtgcatgtccctaagcagaagagaggtgctgggaggcctagagtacagagaataaggggatttcttgagcctggaagaaagagagtgaaatgcaagagatgtaaaagatttggacattttgagaaaacatgcaagctggctgaacctgcagatgcagatgatatgagcagccactgcaccccccaaaaacggaagagacaagtgtgcaggcaaggaaatgatccaggagtgtcaacaagtgaagcaagctgctctgcaccaaagaagaaaaaaacacctaggaaaaaaaagacaccaaaaaagaagaagactccccagaagaggaaagacctagcatcctcaagtgcaccaccaactagagtagttaggagcctatccacctatcttcgactgtaa</cdnaseq>

Protein Sequence

<aaseq>MSAQGPTPASPTALAMYLGKSLVRVASKPHWFSVDVRVQPYATV DADGRKIISKGGTGHWVIDSESFSFDFLMESLRVEFKWGSNQSPLVWYFNKNLGEDVR LIGDTDLPDIFEMYATEASFHLLVAVLEESMDVASVCCVHEPIAIIPPENPSHNDGSG QAATNVGGSAQPTTVEADVREPDMFDNEEEYVGVGGQSSQTAATGVEAPEVEVTDEDP QVVRVLHDPENPNIQIYAVKPDAIEFLEQHHSRIWYRCGFGESSKCDYLTNNVSESFN AQIRNLKGLLPHELVDSIRELIMEKMATRRDVGKKMDDGIIPGVMKQLNDATSLLKVV KIARSDDGHALAWICSSGGRIQDFVSPYYSVQMFRIAYAGRVPPMTDRTQWPVVDLGF KVHVPKQKRGAGRPRVQRIRGFLEPGRKRVKCKRCKRFGHFEKTCKLAEPADADDMSS HCTPQKRKRQVCRQGNDPGVSTSEASCSAPKKKKTPRKKKTPKKKKTPQKRKDLASSS APPTRVVRSLSTYLRL</aaseq>

Gene Sequence

<dnaseqindica>1..86#195..685#773..891#1951..2279#2394..2738#2938..3142#atgagtgcgcaggggcctacgcctgcatcccccaccgcgttggcaatgtatttaggcaaatcccttgtacgggttgcttccaaaccgtgagtaccttcccccatgaactctttatgcagataaaattgcgatttgagtttcgatttgaactttgtatgtgcgatttgagttattgttttgtcattcgttggtaggcattggttttcagtcgatgttagggtgcaaccctatgcgacagtagatgctgatggtaggaaaatcatcagtaaaggaggcactgggcattgggtaatcgattcagagagtttttcgtttgatttcctaatggaaagtttgagggttgagtttaagtggggctcgaaccaatctcccttagtgtggtattttaacaaaaatttgggtgaggatgttaggctcataggggacactgatttgccagatattttcgagatgtatgcaaccgaggccagtttccacctacttgtagcagttcttgaggaaagcatggatgttgcttctgtgtgttgtgtgcatgagcccattgctatcatcccacctgagaacccttcccacaatgatggttctggacaagctgctactaatgttggaggttctgcacagcctacaacagtggaagcagatgttagagagcctgacatgtttgataatgaggaagaatatgttggtgttaatgatgagcagttgtatctgcctccaaaacctacttagccacctgacacctctggccaatcctctcagcctgctgccataggggttggtggccaatcctctcagactgctgccacaggggttgaagctcctgaggtagaagtcactgatgaagaccctcaggttgttcgagtgttgcatgatccagagaatccaaatatagtgaagaatgctctattccctgacatgatatcttttagaaaagcagttaggcattatgcaattaagaaaggttttgagtttgctgatttgaagacagctaaaacaagattcattgcaacctgtcgcgctgaaggctgtccatggagaatacgtgcttccctaatccatgataagaaaacaattaaggtataaatgtattattttagttaatttattttttcatctcctgaaagtagtgttagttttagtaactttttatcaccatgtcatgtcatgcagattacagttcttccctttgaacacaaatgtgcatctaccaaactaagagagggcaagatggctacacagggctgggttgctgataggcttggtgattggttgaagaacaatccaaagaagggtgctaaggatgcaagggggaagctgcaagaacagtatgagatcaagttgaagtattcaaaggcatggtcaggtatgaagttagcactagaacagatacatggtaaatataaggaaagttttcagttgcttttcaactggaaggctgaaattgagaggaagtgtccaggtagtatagttgaaattgaattggagaagttaggaaataaaatgtgcttcaagcatttttttgtagctctaaaaccatgtatagatggctttttgcaagggtgtaggccatatgttggtgtagactcaactaagttgactggaaaatacactggacagttagcttcagccacctctgtagatggtcacaactggctgttttatgtatcatatgcaatttttgatttggcaactgatgacaattggttgtggtttatgaaacaattgaatagagctattggttgtcctgaagggttagttatctcaaccgatgcatgcaaggggttagaaaaggctgttagtgctgcatttagtgatcctgttgagcatagagaatgcattaggcacctctatgttaacttcctaaagaagtaccatggttctgttatcactgagcatttgtatccagctgctaggagctacaccgaggagggtttcaagtaacatatgcagcaaatatatgcagtgaaaccagatgcaatagagtttcttgagcaacatcattcaagaatttggtacagatgtggctttggagaaagcagcaaatgtgactatctgacaaacaatgtttctgagagctttaatgctcagatcagaaatctgaaaggactgcttcctcatgaacttgttgacagcatacgagagttaataatggagaagatggccactagaagagatgttggcaagaaaatggatgatggaatcattccaggtgttatgaagcagcttaatgatgccacatctcttcttaaagtggtgaagattgccagaagtgatgatgggtttgcagaggtcacacttgtggatactgacaacaagacaagaaggcatattgttgacctagacaaccaaaaatgctcttgtagggcttggcaaataacagggaagccatgcaggcatgcattggcctggatatgcagcagtggaggaaggatacaagattttgtgagcccatattatagtgtgcaaatgttcaggatagcttatgcaggcagagtaccacctatgactgacaggacacagtggccagtagttgatttgggcttcaaggtgcatgtccctaagcagaagagaggtgctgggaggcctagagtacagagaataaggggatttcttgagcctggaagaaagagagtgaaatgcaagagatgtaaaagatttggacattttgagaaaacatgcaagctggctgaacctgcagatgcagatgatatgagcagccactgcaccccccaaaaacggtatattgctgtcattgtgcttctattcttaattagtctttgtgcaagcggtttgtattctttaactccaacttgataaaaaaacccaacttgataattattgttagttacactcctgatatattgtgctatgttgtagtcactaagattcaggcttgtatgcttgccatatggtctaaaaattctcacttttttgtaggaagagacaagtgtgcaggcaaggaaatgatccaggagtgtcaacaagtgaagcaagctgctctgcaccaaagaagaaaaaaacacctaggaaaaaaaagacaccaaaaaagaagaagactccccagaagaggaaagacctagcatcctcaagtgcaccaccaactagagtagttaggagcctatccacctatcttcgactgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0398400, RefSeq:Os03g0398400