Os03g0401100

From RiceWiki
Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0401100| Description = Protein kinase domain containing protein| Version = NM_001056852.2 GI:297601063 GeneID:4333060| Length = 7697 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0401100

Description

Protein kinase domain containing protein

Version

NM_001056852.2 GI:297601063 GeneID:4333060

Length

7697 bp

Definition

Oryza sativa Japonica Group Os03g0401100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16833739..16841435

Sequence Coding Region

16837202..16837519,16837680..16837802,16838650..16838737,16840984..16841165

Expression

GEO Profiles:Os03g0401100

Genome Context

<gbrowseImage1> name=NC_008396:16833739..16841435 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16833739..16841435 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagatcacagaattttggagagaggctgctataatctcaaaacttcaccatccaaatgttctagcactttatggtattgtaaataatggacctgggggaacattagctactgtaacagaattcatgatcaatggatccctcaagaaagtcctccttcacaaaaacaaatatcttgattggcgcaagcgcataatggttgcaaaggatgcagccattggaatggaatacttgcactccaaggacattgtccactttgatctgaaatgtgataacttgttggtgaatattaaggatccctctcgtcccatatgcaaggttgctgattttggtttgtcgaagatgaaacaagcgactcttgtttctggtggaatgagaggaactcttccttggatggctccagaattgctgacaatgagtggcacaaaagtatccgaaaagattgatgtatattcatttggcattgtgatgtgggaaattctgactggtgaggatccatatgacggcatgcactatggaggagtcatagggggcattttgagtaacacactgaggccactagtgccaacttcatgtaacctggaatggaggaaactgatggagcagtgctggtcaactgaacctgagcgacgaccttccttcgctgaagttgcaacccgtcttcgctccatgctagaagcaagccaaagtgtgactctgagagttaattag</cdnaseq>

Protein Sequence

<aaseq>MQITEFWREAAIISKLHHPNVLALYGIVNNGPGGTLATVTEFMI NGSLKKVLLHKNKYLDWRKRIMVAKDAAIGMEYLHSKDIVHFDLKCDNLLVNIKDPSR PICKVADFGLSKMKQATLVSGGMRGTLPWMAPELLTMSGTKVSEKIDVYSFGIVMWEI LTGEDPYDGMHYGGVIGGILSNTLRPLVPTSCNLEWRKLMEQCWSTEPERRPSFAEVA TRLRSMLEASQSVTLRVN</aaseq>

Gene Sequence

<dnaseqindica>3464..3781#3942..4064#4912..4999#7246..7427#atgagaaccaattggcaaacttgatgtgagctccagtagtagctcagaagctgaaacccccagaggtcagtaactctttcctgctttctacacttgttcccttttgattcagcttctgtgatgcttatattattattgtttaaattttagcaacccaaaactcatgaaaagaaaaacagaaggcctttagtcatttattgatctttgttacctttttgtatttctaagaattgattattcattgccatgttcttgtagtaaagtacatatggctgcctttttatcatgacttgacctgataattcaaaggttccaacaatcttccataccaagtctgatgaacgcccaaatcatacgaatccagagattttgtgagaagcaagcaacatataactaaattactagtcagactagcgagggattgcctattcaatttatgcagctttgcaaatacaacgaatccttcagttccaaccatctcgagagaaaagcctacagacataactaaaccagttccatggactggagggaaccagctaacatctgtgaacagaaactaccaacaaaacggccatatccttcactcagtgacaccagcagtgagggatcatgcaatcggtacccccgaaatcattatgatgatacaccaatgagaattaagtttatttgtaattttggtggtagattcttaccaaggccgagtgatggtcagctccggtatgtcggaggtgagaggcacttgattaaaattagccgggacatttcatggaaagagctcatctgcaagacatcaaagttaataaggcgagctcatatgatcaaataccacctaccaggggagccaatgaacatgctcatttccatcacctgtgatgatgacctccggaatatgattgatgagtgcattgttctagaacgaaccaaagtattgttgaccgtttacctctttgctgataatgatgatgagcgccatgtgcatttcgtattaggaagctcatccagtacagacaaggaagcgcagttcattgctcttgtcaatgggctcgtcagaccaggtgaggaattgaaaaagcagaggcttagaaacacctcagccaatgacctagatcaacttatgtttgacatcaatgaagaagggttgttagccaggacagacaaagcttcaccaaacgtccaaagtaagctctcaccaagtatcgtcaaggtaccgctgaagacatcaagggagcagctggagaacatgcctccaagttcccaactagctgtgaccaaccaagattacaaggcaccaagaaatgaagataacccactgtgtaccgccagaaagacaaataatgctcaccttggctcctctgtaccttctgaatccacgtgcataggtaaggtggaagctggggctcatgctgtctccaggcatcatccaggacagagaaatactgctacaaacatgaccagaaagagcaaccaagcaacagaagatcaggtaaaaggatcaccaagaaaacagcttccgatacaagtagacagcagaggtgtgaatgtagtgtcatcaaattcaaacaacaatagcctaacgatgcatatacatctacctgtttatgaaaaggttgcatccttatcagggggttcagagaaaacagtcaaccagccaacctcccatgataacaagatgaaactaaaaacatatagcacccaagaagaagctgtgtctcactcagcatcccataataagacggagatgcataaacgtagtcttgactttcctactccatcacgatgccatgatgatacgtacaacagtacgaacagtacaaacctgcatattctggagaagtcaattacaactaacaacaagcagaagcaacagcctgcagtcatgtgcattgacattttgaagaaaaaccatcctcctgaaccgaccaaaggtgaaacagtactttcctgttcttatctatcttcagacaagacaactgagctgcagaaaaatattctagtcagatcttcaagtgagcgacaagaacgacccaacagtccaaaaccagatgaacatttatcaacagcccgttctcgatcagttggtgcagatagaattagccctcagatcagaactccatcgcaagaatctaaagataatgttgcaccatttatcgaagagtctgaggtacatctataatctagtttcttgttacaattgaaaagttataatttactgtacaaattctgaacaatcttttggcaggcatgtgagaccaagaacagtgaggaagctttatctgcaaacacagtaatggggagagaacttataagtaatgtccaggttgtagtgaaatccttatctaatgctacattcagtcacaaaaaattgaccaatgaaattctactataatatatcagaaaatgctatactccacaagactagaagtgtaatattatgcaaagcatactttataacggatttgcacatcattttatatatatccaagttttgcgtcgtaaacattagctttagtttaaaaaaaacacggccagcattcttgggcgttataaaatatacaatgtttgggacaagatttggtcaactttttaaaattttgaccatcaatattttgaagttcttaggttacaaacaaaaaaattggtgtgtagatttgcctcgaaaagtaccatcataatatcataagcttattagattttataaacttactttaatataacatcgaaggtcaggattttaaaattttgaccaaatcgtatccaaaatgtcatataattttggcagtggatgccatacaaatgacacatattcccaaatttctaccattaaatgggaactagagtttaaaaaaacttattcctacagtggatgtcatacaaatgacaggtaataaacaatggggaccttgaagatctccgtgagataggctctggttcatttgggactgttttccatggaagatggaaggggacagatgttgccattaagcgcataaagaacagctgttttatgtacccatcgtctcaggcagataaactggtaagcctatatgaactcacccagatgatttgaagttgcaatagctagttagctcctgaggtcttgtactccagtaatccaacttttaaaagatcctcatgattgtgcatgcctatcacatgtagtcatattaattttatcttactctttgaattgaaaaaagaaataaaactatagatcaacaatcccaccaatatgtcctataaaccaactacattggccaatatcggacccagaccagggagctcctcaccaggtgagaacagctggtatggaatacgaccaagagctgcagtggccaactggttccagaaataagacacctctatggctctgaaatcctagtatagaaattcagtattaactaaaatttagcactataaaaaaaatgtgctgcaaatattactgtgttgcccatcatgtattgtcatgcagatcacagaattttggagagaggctgctataatctcaaaacttcaccatccaaatgttctagcactttatggtattgtaaataatggacctgggggaacattagctactgtaacagaattcatgatcaatggatccctcaagaaagtcctccttcacaaaaacaaatatcttgattggcgcaagcgcataatggttgcaaaggatgcagccattggaatggaatacttgcactccaaggacattgtccactttgatctgaaatgtgataacttgttggtgaatattaaggatccctctcgtcccatatgcaaggtatgttcacttaacgttacagtagcatagattatgacaaaattatcttgtacatgcaaatgtgtggataaatatgtttcacaccttagatttgttatataaactgaaggatattgtgtataaaactgggggccgtaacagacaaataatggtgcaacaggttgctgattttggtttgtcgaagatgaaacaagcgactcttgtttctggtggaatgagaggaactcttccttggatggctccagaattgctgacaatgagtggcacaaaagtatccgaaaaggtaaagttctgatttccaatttgcatatttgcatgtgaaaaagggaaagatagacagtacctgttgtgtttttataaattcgaaatttggagatcccctggaaaaacagctttatagcgttaatattatcattattagttaaacaaatggatgttgtagagtttgacatgcaccccccatagccgaaggagaaagatttcacatatcaaactgacagtttattacttgatgttattagatagcatatatgtaacaaaagaaaggtgggctttacattttataaataaatgagatactggtgtacttggcatttactcatcagaccaccaaaccgtatcggtatgatcaagatatgtgatgtgctcactagcagttatctattacgatcaaccaccactgatttctgccctataaaagacaacgactgacttttgtcctaaaaaagcaaccactgacttctaacaagaactaaactactgaaggatataatttttttttcgccgggacggcaaaggaatgtcggctgtagtatattaagaaaaggagagaatgtacagtgtagcgaggctttgcagcccgcgcctatttactgaaggatataatcattagcggttcatgaaaacataggagcacagaaactaagccatacttattttctttttcaaagacaatgtaggggagggccccacagttagattttattaaaagatattatgtacaaagattacaacagataattcacgcattcatcaaagaattaaggtgtgccatgaaaaagagaaccgcactgtctttcttggaattttatattttctagcctgaacacatggtttttatgctaatacagattgatgtatattcatttggcattgtgatgtgggaaattctgactggtgaggatccatatgacggcatgcactatggaggagtcataggtatgcatttaatacagatactctggaaaaaaaataaactcgtttgctgagttgcatgttctgttgctttgatcctaaactcgataattaaccctctaggtctgcaaaattgataataaggcaagacaggacaaacccaggcttagactagtgattaattccttgtgtcccaaaacacatattacagtattagcaaaattcctttgcctcactgacaagtcacaaccatagctcagtgaaataaccgattgtcacataaaggaagaggtgaacattcagttgcatataagaaattcaccttaaattagtaattatagtgatgatagtgcaaaccaattttgttttttaagttttctgggaaaaaaaaagtcaagtcaaaatttgagaacattcttgcaaagtaaaatctgtccaaagatatacaagagtttgatttatatccataataatcaattatccattcatctcacatgataatgtcaaaaataaaataagttatactccctctggtcataaatatttggcgtttataactagatttggtttgtcgtgtgtgaggtaggggcactcacacaagtggtgacctaaatgtagtttgtcatgtcatcgtacaagggttacattttattcaactccaaagtttgaaatattgtatatgcattcactgtctacagagatcatgtactccctccgtctcaatataagtgcaacctagtacagatgtggcatatcctaagactacgaatctgaacagctatctgtccagattcatagtcctaggatatgtcacatctattaggttgcgcttatatagagaccgagggagtagttttcaggctgtcactaaggaagccatccaagtattcaaaatatacagcaactatagatgttaaatttgaacatcttcctatatgtatcatcagaaatgataaacaggcaataaaaccaggttcacaaaatcagaagtcaccactggtaaccaagattaggtgagatatcagttactttcagtaaattgcacccacggtacaacaacttggcaggtgggtgcgatatagcgcaagaacttgagaattgaacgtccgagtgcaacaacttaacaagtgggtgcgttctagtacaagaacttgacaatttagtattttggtgaatcaatttggctaagcatatgctaggtgaggtttttcacgatgtcaatatgccaatacatagtaatcctatggatattaccttataatattgaatttaatctttaagaattatattgcacatacaatttacattcagttacctttaagaattttttgttttcttcaccttctcaaatattaaccgaaatataataatttctacatccagtttaattgactttcagttattagttattagagttattagttattaggataaaaatataaatatgtttatacgaatccacgctagtatattgtcaagtacttaaaattttgaatttatataaaaaatgctccaaataattaagttgtcacaacttcttaatttattatatcaaaatcgtacctaccttgcaagttgttgcatttatacgatcacttataaagttcttatactaaattataccttcttgccaagttgttgcactagaacgctcatttttcaagttattacaccaaattgcacccacctgccaagttgttgcaccgtgggtgcaatttactctttaatttccatgcttgtcctagcttgttagagaccattccaggtgattgtgtctgaacagtggctaaattaggtagatcctggctgaatttatcctgtttgcaagcaatccatgatttactaaggctgtgtacggcaagtcattttcccaactaccactccctcattttccacgtgcatgcttaccaaattgctaaatggtgcattttttgcaaaaaaaaaaaggatagaaaagttgctttaaaagatcatattaatccatttttcaagtttattttagctaaagcttaattaatcatacactaatcgattgctccgttttgtgtgtggggaggtggagttcctaacctccatctccgaacacagcctaacagagtttagagactagcaattcttagccagtttttgaaaaccacttcactgagggaggtcactgcattctgcaaagttgattgagacattataatgctctgcatataattttcattaattatagcgtagaaatgcaagattcatatgctaataaaatggcataccaaaaaatgcagggggcattttgagtaacacactgaggccactagtgccaacttcatgtaacctggaatggaggaaactgatggagcagtgctggtcaactgaacctgagcgacgaccttccttcgctgaagttgcaacccgtcttcgctccatgctagaagcaagccaaagtgtgactctgagagttaattagcatcactctctgtctgtatatctatcatttaggtgcatgctacagaattgcaaatatgaatgtttcttcttatattgagtatcgcttataagtatgcaattgtataactcctgcagaccaaagctgactatcgggtgccccctgtcttgtattgtacatgcatgtatccacagcatgaaactgtaggggaaaaagtaaacagaagctcccttatctatgtgaagatctttacactttagtggggatactttaaagttatccagattctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0401100, RefSeq:Os03g0401100