Os03g0410000

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0410000| Description = Homeodomain-related containing protein| Version = NM_001056876.1 GI:115453480 GeneID:4333088| Length = 4197 bp| Def...")
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Gene Name

Os03g0410000

Description

Homeodomain-related containing protein

Version

NM_001056876.1 GI:115453480 GeneID:4333088

Length

4197 bp

Definition

Oryza sativa Japonica Group Os03g0410000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17515405..17519601

Sequence Coding Region

17515751..17516453,17519176..17519305,17519418..17519550

Expression

GEO Profiles:Os03g0410000

Genome Context

<gbrowseImage1> name=NC_008396:17515405..17519601 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17515405..17519601 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggaagccgtgctgctccaaggaggggctgaacaggggggcatggacggcaatggaggacgacatcctggtgtcctacatcgccaagcacggggagggcaaatggggagccctccccaagagagccgggctgaagcggtgcgggaagagctgccggctgcggtggctcaactacctgcggccggggatcaagaggggcaacatctccggcgacgaggaggagctcatcctcaggctccacactctcctcggcaacagatggtcgctgatagccgggaggctgccggggcgaacagacaatgaaatcaagaactactggaacagcaccctcagcaagcgggtcgccatgcaacggaccgccgccgccaccagcatgccggcggcggccaccaccagcagcaatgccgacgccgccggcgctgctgcacgacgccggcgatcgccggagccccgcacggtcgtcgtcagcccaatccggaccaaggcgctgcggtgcaacaacaacagcagcagcgggatagtggtggtgcagcaggcaggcgcctgcagccacggcggccgtccgccggagagcggcgcgccgggagacgcggcggctgataaggtggccacgccgcaggcggtgcagcagcagcagcagcaagagctggccggagcggaggatgacgacgacctgccggtgccggccgtctgtatcgaccttgacttggacgacatcgagctgggaggactcgacggcttcctgatcagcccgtggcgcggcggcggccacgacgacggtaacgccgccgccggagcggtgccgaatctgccgatgccgattggctatgagctcggcggcgccggtggcggtggcgaggctggagctgttgacctggaggcgttgctggggcagctggaagcagaggaagacgacgacggtgaccaccaccaccaccaccaccaccaccaccaccagtag</cdnaseq>

Protein Sequence

<aaseq>MGRKPCCSKEGLNRGAWTAMEDDILVSYIAKHGEGKWGALPKRA GLKRCGKSCRLRWLNYLRPGIKRGNISGDEEELILRLHTLLGNRWSLIAGRLPGRTDN EIKNYWNSTLSKRVAMQRTAAATSMPAAATTSSNADAAGAAARRRRSPEPRTVVVSPI RTKALRCNNNSSSGIVVVQQAGACSHGGRPPESGAPGDAAADKVATPQAVQQQQQQEL AGAEDDDDLPVPAVCIDLDLDDIELGGLDGFLISPWRGGGHDDGNAAAGAVPNLPMPI GYELGGAGGGGEAGAVDLEALLGQLEAEEDDDGDHHHHHHHHHHQ</aaseq>

Gene Sequence

<dnaseqindica>3149..3851#297..426#52..184#gacgctgccgccattggcattgtttgtaggcgatcgatcgagcaatcgtggatggggaggaagccgtgctgctccaaggaggggctgaacaggggggcatggacggcaatggaggacgacatcctggtgtcctacatcgccaagcacggggagggcaaatggggagccctccccaagagagccggtcggtcgtcgtcttcttcctcctcctctctactctctagctttgccttcgatcggtggtgaacagctgatgaagtgatgagatgagatcgccatggatgaatgcaatgcagggctgaagcggtgcgggaagagctgccggctgcggtggctcaactacctgcggccggggatcaagaggggcaacatctccggcgacgaggaggagctcatcctcaggctccacactctcctcggcaacaggcctgtctctgatcctctcctctcctcctctcctgcaaattaatccagcccggcctaccactttcatttcctgcttgcttatcagtaatttaactcgccaattcagtgtatgtactggagtagttagtgattgatttgcatacttgataggactgctttgctctgcatgcctgcatatctgcattcctgcgttgctgaagaaattgacgatgcagccatgatgcattcttgttcagtaaaatcctgtttctctcctctctctctctctctctctcttttttttggcgccctgtttctaagtccgttctaaatcagccaaactccgatgctaaactctaggggaacagtaacatgcagattgcagacagcctgacactagtgttcaagccaaatgaatgattttattttcttttcttgcgagccaaatgaatgaattttagctagagcgtacaaggacatgatcactactggcggatgaccatagttctgatgaatctcgccgagattttttttctgctcccacaaaaatgctgcagttactcaggggttgtttggttcgtgtcctgagggccacgcctgagaaaaactcacgccggacaggcagcattgggagatgcaacacttgcctcataggcagcctgaagctttgtgtgtttggttcatgcacatacctgaagaataataaaatatcaaaaagcaacttttactagagcaaagcatagaataaatgacacatgcatcattaagagtagctgcctgaagctcaggcatccaaattcgatggcctggctcaggctaataaagttgcctgaggatttagcaggctaatgaagagtcaggtcaggctagctcaggatacaccagggcacaaaccaaacacgtagttgttggagcttaggcagcgctccggccaggcatgcaagcatcaagacgcgaaccaaacagcccctcaatttctttagatctgaattgttcaaaattgggttttcctttcaaaattcaaatgtttttctttaaaatactctgacaaggaatcatttttttccccaaaatgagatcaagaattctgagaatatcaccgagaattttattgctagacgtatgtagagagggtcctttaaaagattgcacatcagtatattagggttatggactcatcatgatcatctccctagtaactagcttgctctctttagcacatgatggaatgaagctttctattcgtttctcttggtttgatgacagatatcacacatctgtctgctccatgagatgagaaacagacaaagtaggccaacacagccatgactaagccaacaactaattgcctccaattaacagaaccacctaagcacacttttacccaaatcagtcaccacctgcacaattttccagatcagctgtctctctagaagaacaaaccttttgttgtcagtgcagtctctgctctccagattagggtaatctgaaaagagtaattaggtcagcaaagttgatgatgacagatggaatcatacaaggctgcttctatatatacacctaaagccacaaactcacacaagaaagaagagcaaagtttttgcctaggatcggaagagcacatgatgaatgcacaaccacttctctcagacgtggcaagcattgtgctttcacatatggaaaagtgcagctcacattgtgcattgcaacttaataccccctccgtctcaatttaacgagacgtccttgtttttagaaaaatcaatctagacaacttttaactaataattattttacgaacacgtaaaagccttacgtatcatagaaaaaaagagaggagattttacaactacgacctgctaacataaattagtatgaagacaattggactcttaaaaacaaaaaggggataaaatgagaaataaatatatggtcaaatatctatgtttatattatccatttctatatctaatgtgatgcctatcatataattatattcgtatttttaaaagcttatgctaattttatagttattggtacgtattatgaaataaatagatggtcaaatattgaagaccgtatattaaaaataataataggcctgaaactttacgacacatggagtacgaagcgagggaacttataaaactatagttggtcaaatgggcggcacggcacggccgtgcctaggccgaggttaatcaggtcggcatggcccgaccgacacgccgggccgtgccgtgccagcccacgggctgcatacacagcagtccgaaagacacgacggcccattgtgcttctaaaaaaaaagtatattttttatccctcaactctgttgactgtgttcatatggctggaaaataagtctattttgtattcttcttctttttggccttgccttatacggtaattaagtctatttgcatccctatagttgttgtgccgggccaacccaccgtgcctagggtgcagcccaggcatggcccggttgttggatctggctagtacgggcacgaccccagtcgggtcatgccatgtttgggctgggccaaaatggcgtgccttgggccgggccatgggcctcgggccatatggccatctatacttaaaacttgtttactgctgtagatctgcaatacgtagcgaaccaaaacttttgtgttgttcttttctttttcaaatttggtcgaaattgcttcaattttgaaaacttggtaagacttgtatggaactatggatgcagatggtcgctgatagccgggaggctgccggggcgaacagacaatgaaatcaagaactactggaacagcaccctcagcaagcgggtcgccatgcaacggaccgccgccgccaccagcatgccggcggcggccaccaccagcagcaatgccgacgccgccggcgctgctgcacgacgccggcgatcgccggagccccgcacggtcgtcgtcagcccaatccggaccaaggcgctgcggtgcaacaacaacagcagcagcgggatagtggtggtgcagcaggcaggcgcctgcagccacggcggccgtccgccggagagcggcgcgccgggagacgcggcggctgataaggtggccacgccgcaggcggtgcagcagcagcagcagcaagagctggccggagcggaggatgacgacgacctgccggtgccggccgtctgtatcgaccttgacttggacgacatcgagctgggaggactcgacggcttcctgatcagcccgtggcgcggcggcggccacgacgacggtaacgccgccgccggagcggtgccgaatctgccgatgccgattggctatgagctcggcggcgccggtggcggtggcgaggctggagctgttgacctggaggcgttgctggggcagctggaagcagaggaagacgacgacggtgaccaccaccaccaccaccaccaccaccaccaccagtaggaggaggaggtgccttcttcgcttggggacgaagacgacgactacttggagttcgcgccatggctcctctgatagcggcatccatccatggatcattgtggaatcgaatcagtcgagctgagagttgagagttgagaaagatcgatgattgctttgctggtcgtgtgttcctgcgagtcggatcatcggcacgaagagagatctcatcgattaagtaggcgcagaaggcgtacgttgaagcttagctgctgaagaattactgacgtagtcagatgaccatttccttatatattgtacagattataatggagcagattaaataaatctaaacacaccgcatttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0410000, RefSeq:Os03g0410000